RNA–Protein interactions for RNA: ENST00000254231.4

LIN28A-201, Transcript of lin-28 homolog A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN28A, Length 3,458 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28A-201ENST00000254231 SMPD2O60906 423 aa9.97□□□□□ -0.81
LIN28A-201ENST00000254231 SS18L1O75177 396 aaPredicted RBP9.97□□□□□ -0.81
LIN28A-201ENST00000254231 RBMXL2O75526 392 aaKnown RBP9.97□□□□□ -0.81
LIN28A-201ENST00000254231 TMEM50BP56557 158 aa9.97□□□□□ -0.81
LIN28A-201ENST00000254231 RPS16P62249 146 aaKnown RBP9.97□□□□□ -0.81
LIN28A-201ENST00000254231 PDZK1IP1Q13113 114 aa9.97□□□□□ -0.81
LIN28A-201ENST00000254231 NDUFA5Q16718 116 aa9.97□□□□□ -0.81
LIN28A-201ENST00000254231 PLA1AQ53H76 456 aa9.97□□□□□ -0.81
LIN28A-201ENST00000254231 WDR31Q8NA23 367 aa9.97□□□□□ -0.81
LIN28A-201ENST00000254231 OR10V1Q8NGI7 309 aa9.97□□□□□ -0.81
LIN28A-201ENST00000254231 LILRB4Q8NHJ6 448 aa9.97□□□□□ -0.81
LIN28A-201ENST00000254231 SECTM1Q8WVN6 248 aa9.97□□□□□ -0.81
LIN28A-201ENST00000254231 CCDC32Q9BV29 185 aa9.97□□□□□ -0.81
LIN28A-201ENST00000254231 NXF2Q9GZY0 626 aaKnown RBP9.97□□□□□ -0.81
LIN28A-201ENST00000254231 MOB1AQ9H8S9 216 aa9.97□□□□□ -0.81
LIN28A-201ENST00000254231 A0A0A6YYD4 124 aa9.96□□□□□ -0.81
LIN28A-201ENST00000254231 CD53P19397 219 aa9.96□□□□□ -0.81
LIN28A-201ENST00000254231 UCNP55089 124 aa9.96□□□□□ -0.81
LIN28A-201ENST00000254231 PAN3Q58A45 887 aaKnown RBP9.96□□□□□ -0.81
LIN28A-201ENST00000254231 CDH24Q86UP0 819 aa9.96□□□□□ -0.81
LIN28A-201ENST00000254231 OSR2Q8N2R0 312 aa9.96□□□□□ -0.81
LIN28A-201ENST00000254231 RAB40AQ8WXH6 277 aa9.96□□□□□ -0.81
LIN28A-201ENST00000254231 PP6455Q8WZ26 134 aa9.96□□□□□ -0.81
LIN28A-201ENST00000254231 SULT4A1Q9BR01 284 aa9.96□□□□□ -0.81
LIN28A-201ENST00000254231 CYB5R3P00387 301 aaPredicted RBP9.96□□□□□ -0.82
LIN28A-201ENST00000254231 NDUFB7P17568 137 aa9.96□□□□□ -0.82
LIN28A-201ENST00000254231 CDKN1AP38936 164 aa9.96□□□□□ -0.82
LIN28A-201ENST00000254231 IGFL3Q6UXB1 125 aa9.96□□□□□ -0.82
LIN28A-201ENST00000254231 FGFRL1Q8N441 504 aa9.96□□□□□ -0.82
LIN28A-201ENST00000254231 NKAIN3Q8N8D7 197 aa9.96□□□□□ -0.82
LIN28A-201ENST00000254231 TMEM185AQ8NFB2 350 aa9.96□□□□□ -0.82
LIN28A-201ENST00000254231 RNASE11Q8TAA1 199 aaKnown RBP9.96□□□□□ -0.82
LIN28A-201ENST00000254231 GRPEL2Q8TAA5 225 aa9.96□□□□□ -0.82
LIN28A-201ENST00000254231 SUN5Q8TC36 379 aa9.96□□□□□ -0.82
LIN28A-201ENST00000254231 TMEM45BQ96B21 275 aa9.96□□□□□ -0.82
LIN28A-201ENST00000254231 WDR89Q96FK6 387 aaPredicted RBP9.96□□□□□ -0.82
LIN28A-201ENST00000254231 UBTD1Q9HAC8 227 aa9.96□□□□□ -0.82
LIN28A-201ENST00000254231 MTCH1Q9NZJ7 389 aa9.96□□□□□ -0.82
LIN28A-201ENST00000254231 SLC23A1Q9UHI7 598 aa9.96□□□□□ -0.82
LIN28A-201ENST00000254231 WASF3Q9UPY6 502 aa9.96□□□□□ -0.82
LIN28A-201ENST00000254231 IGHV2OR16-5A0A0B4J2B6 119 aa9.95□□□□□ -0.82
LIN28A-201ENST00000254231 TEX13DA0A0J9YY54 714 aaPredicted RBP9.95□□□□□ -0.82
LIN28A-201ENST00000254231 TRIM64BA6NI03 449 aa9.95□□□□□ -0.82
LIN28A-201ENST00000254231 RFPL4AA6NLU0 287 aa9.95□□□□□ -0.82
LIN28A-201ENST00000254231 RFPL4AL1F8VTS6 287 aa9.95□□□□□ -0.82
LIN28A-201ENST00000254231 ISG15P05161 165 aa9.95□□□□□ -0.82
LIN28A-201ENST00000254231 THBS4P35443 961 aa9.95□□□□□ -0.82
LIN28A-201ENST00000254231 NAAAQ02083 359 aa9.95□□□□□ -0.82
LIN28A-201ENST00000254231 ZNF154Q13106 437 aa9.95□□□□□ -0.82
LIN28A-201ENST00000254231 ZNF808Q8N4W9 903 aaPredicted RBP9.95□□□□□ -0.82
LIN28A-201ENST00000254231 MAPK1IP1LQ8NDC0 245 aa9.95□□□□□ -0.82
LIN28A-201ENST00000254231 OR5H2Q8NGV7 314 aa9.95□□□□□ -0.82
LIN28A-201ENST00000254231 HPSE2Q8WWQ2 592 aa9.95□□□□□ -0.82
LIN28A-201ENST00000254231 OR2V2Q96R30 315 aa9.95□□□□□ -0.82
LIN28A-201ENST00000254231 ZC4H2Q9NQZ6 224 aa9.95□□□□□ -0.82
LIN28A-201ENST00000254231 TRAPPC2LQ9UL33 140 aa9.95□□□□□ -0.82
LIN28A-201ENST00000254231 IGKV1D-8A0A087WSZ0 117 aa9.95□□□□□ -0.82
LIN28A-201ENST00000254231 DEGS1O15121 323 aa9.95□□□□□ -0.82
LIN28A-201ENST00000254231 NDUFS7O75251 213 aa9.95□□□□□ -0.82
LIN28A-201ENST00000254231 HPXP02790 462 aa9.95□□□□□ -0.82
LIN28A-201ENST00000254231 SSTR2P30874 369 aa9.95□□□□□ -0.82
LIN28A-201ENST00000254231 AESQ08117 197 aa9.95□□□□□ -0.82
LIN28A-201ENST00000254231 FCN2Q15485 313 aa9.95□□□□□ -0.82
LIN28A-201ENST00000254231 RELL2Q8NC24 303 aaPredicted RBP9.95□□□□□ -0.82
LIN28A-201ENST00000254231 ZNRF1Q8ND25 227 aa9.95□□□□□ -0.82
LIN28A-201ENST00000254231 C17orf50Q8WW18 174 aa9.95□□□□□ -0.82
LIN28A-201ENST00000254231 C5orf51A6NDU8 294 aa9.95□□□□□ -0.82
LIN28A-201ENST00000254231 HOXB5P09067 269 aa9.95□□□□□ -0.82
LIN28A-201ENST00000254231 PRKACBP22694 351 aa9.95□□□□□ -0.82
LIN28A-201ENST00000254231 CPT2P23786 658 aa9.95□□□□□ -0.82
LIN28A-201ENST00000254231 ZMYND11Q15326 602 aa9.95□□□□□ -0.82
LIN28A-201ENST00000254231 LRRC29Q8WV35 223 aa9.95□□□□□ -0.82
LIN28A-201ENST00000254231 SMIM4Q8WVI0 70 aa9.95□□□□□ -0.82
LIN28A-201ENST00000254231 ITLN1Q8WWA0 313 aa9.95□□□□□ -0.82
LIN28A-201ENST00000254231 FANCFQ9NPI8 374 aa9.95□□□□□ -0.82
LIN28A-201ENST00000254231 KCNJ16Q9NPI9 418 aa9.95□□□□□ -0.82
LIN28A-201ENST00000254231 TEX15Q9BXT5 2789 aa9.94□□□□□ -0.82
LIN28A-201ENST00000254231 OR14I1A6ND48 311 aa9.94□□□□□ -0.82
LIN28A-201ENST00000254231 SCO1O75880 301 aa9.94□□□□□ -0.82
LIN28A-201ENST00000254231 OR4A8P0C604 315 aa9.94□□□□□ -0.82
LIN28A-201ENST00000254231 GLP1RP43220 463 aa9.94□□□□□ -0.82
LIN28A-201ENST00000254231 FUT6P51993 359 aa9.94□□□□□ -0.82
LIN28A-201ENST00000254231 MSMPQ1L6U9 139 aa9.94□□□□□ -0.82
LIN28A-201ENST00000254231 OR56B1Q8NGI3 324 aa9.94□□□□□ -0.82
LIN28A-201ENST00000254231 TAS2R8Q9NYW2 309 aa9.94□□□□□ -0.82
LIN28A-201ENST00000254231 COL27A1Q8IZC6 1860 aaPredicted RBP9.94□□□□□ -0.82
LIN28A-201ENST00000254231 MEIKINA0A087WXM9 373 aa9.94□□□□□ -0.82
LIN28A-201ENST00000254231 A0A0U1RQV5 110 aa9.94□□□□□ -0.82
LIN28A-201ENST00000254231 GABARAPH6UMI1 98 aa9.94□□□□□ -0.82
LIN28A-201ENST00000254231 I3L521 148 aa9.94□□□□□ -0.82
LIN28A-201ENST00000254231 KCNMB1Q16558 191 aa9.94□□□□□ -0.82
LIN28A-201ENST00000254231 IGSF11Q5DX21 431 aa9.94□□□□□ -0.82
LIN28A-201ENST00000254231 TMEM108Q6UXF1 575 aa9.94□□□□□ -0.82
LIN28A-201ENST00000254231 NOXA1Q86UR1 476 aa9.94□□□□□ -0.82
LIN28A-201ENST00000254231 SCCPDHQ8NBX0 429 aa9.94□□□□□ -0.82
LIN28A-201ENST00000254231 DEDD2Q8WXF8 326 aa9.94□□□□□ -0.82
LIN28A-201ENST00000254231 FOXRED1Q96CU9 486 aaPredicted RBP9.94□□□□□ -0.82
LIN28A-201ENST00000254231 REPIN1Q9BWE0 567 aaKnown RBP9.94□□□□□ -0.82
LIN28A-201ENST00000254231 PLSCR4Q9NRQ2 329 aa9.94□□□□□ -0.82
LIN28A-201ENST00000254231 CA10Q9NS85 328 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms