RNA–Protein interactions for RNA: ENST00000253812.7

PCDHGA3-201, Transcript of protocadherin gamma subfamily A, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA3, Length 4,771 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-201ENST00000253812 RGP1Q92546 391 aaPredicted RBP11.74□□□□□ -0.53
PCDHGA3-201ENST00000253812 HIST1H2BAQ96A08 127 aa11.74□□□□□ -0.53
PCDHGA3-201ENST00000253812 POM121L2Q96KW2 1035 aa11.74□□□□□ -0.53
PCDHGA3-201ENST00000253812 AKIRIN1Q9H9L7 192 aaPredicted RBP11.74□□□□□ -0.53
PCDHGA3-201ENST00000253812 HES4Q9HCC6 221 aa11.74□□□□□ -0.53
PCDHGA3-201ENST00000253812 DNAJC4Q9NNZ3 241 aa11.74□□□□□ -0.53
PCDHGA3-201ENST00000253812 PTRH2Q9Y3E5 179 aaKnown RBP11.74□□□□□ -0.53
PCDHGA3-201ENST00000253812 A0A0B4J293 547 aa11.74□□□□□ -0.53
PCDHGA3-201ENST00000253812 CXCL10P02778 98 aa11.74□□□□□ -0.53
PCDHGA3-201ENST00000253812 CYC1P08574 325 aa11.74□□□□□ -0.53
PCDHGA3-201ENST00000253812 MMP16P51512 607 aa11.74□□□□□ -0.53
PCDHGA3-201ENST00000253812 LILRA3Q8N6C8 439 aaPredicted RBP11.74□□□□□ -0.53
PCDHGA3-201ENST00000253812 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.74□□□□□ -0.53
PCDHGA3-201ENST00000253812 CA10Q9NS85 328 aa11.74□□□□□ -0.53
PCDHGA3-201ENST00000253812 TMEM238LA0A1B0GVL6 79 aa11.74□□□□□ -0.53
PCDHGA3-201ENST00000253812 A6NJY4 79 aa11.74□□□□□ -0.53
PCDHGA3-201ENST00000253812 IGLV3-25P01717 112 aa11.74□□□□□ -0.53
PCDHGA3-201ENST00000253812 APCSP02743 223 aa11.74□□□□□ -0.53
PCDHGA3-201ENST00000253812 FCARP24071 287 aa11.74□□□□□ -0.53
PCDHGA3-201ENST00000253812 PRAMEF20Q5VT98 475 aa11.74□□□□□ -0.53
PCDHGA3-201ENST00000253812 DMKNQ6E0U4 476 aaPredicted RBP11.74□□□□□ -0.53
PCDHGA3-201ENST00000253812 LAT2Q9GZY6 243 aa11.74□□□□□ -0.53
PCDHGA3-201ENST00000253812 NEU3Q9UQ49 428 aa11.74□□□□□ -0.53
PCDHGA3-201ENST00000253812 LAMB2P55268 1798 aa11.74□□□□□ -0.53
PCDHGA3-201ENST00000253812 A0A1W2PN81 502 aa11.74□□□□□ -0.53
PCDHGA3-201ENST00000253812 SIRPB1O00241 398 aa11.74□□□□□ -0.53
PCDHGA3-201ENST00000253812 GAPDHP04406 335 aaKnown RBP11.74□□□□□ -0.53
PCDHGA3-201ENST00000253812 FUT7Q11130 342 aa11.74□□□□□ -0.53
PCDHGA3-201ENST00000253812 PTCRAQ6ISU1 281 aaPredicted RBP11.74□□□□□ -0.53
PCDHGA3-201ENST00000253812 OR1L4Q8NGR5 311 aa11.74□□□□□ -0.53
PCDHGA3-201ENST00000253812 SLC6A13Q9NSD5 602 aa11.74□□□□□ -0.53
PCDHGA3-201ENST00000253812 CACNG5Q9UF02 275 aa11.74□□□□□ -0.53
PCDHGA3-201ENST00000253812 TLCD2A6NGC4 264 aa11.73□□□□□ -0.53
PCDHGA3-201ENST00000253812 SEMG1P04279 462 aa11.73□□□□□ -0.53
PCDHGA3-201ENST00000253812 CD22P20273 847 aa11.73□□□□□ -0.53
PCDHGA3-201ENST00000253812 BTF3P20290 206 aaKnown RBP11.73□□□□□ -0.53
PCDHGA3-201ENST00000253812 RPL11P62913 178 aaKnown RBP11.73□□□□□ -0.53
PCDHGA3-201ENST00000253812 ZNF816Q0VGE8 651 aaPredicted RBP11.73□□□□□ -0.53
PCDHGA3-201ENST00000253812 ANKRD55Q3KP44 614 aa11.73□□□□□ -0.53
PCDHGA3-201ENST00000253812 NHLRC3Q5JS37 347 aa11.73□□□□□ -0.53
PCDHGA3-201ENST00000253812 FBXL14Q8N1E6 418 aa11.73□□□□□ -0.53
PCDHGA3-201ENST00000253812 ROBO4Q8WZ75 1007 aa11.73□□□□□ -0.53
PCDHGA3-201ENST00000253812 SLC25A33Q9BSK2 321 aa11.73□□□□□ -0.53
PCDHGA3-201ENST00000253812 AAMDCQ9H7C9 122 aa11.73□□□□□ -0.53
PCDHGA3-201ENST00000253812 AP5S1Q9NUS5 200 aa11.73□□□□□ -0.53
PCDHGA3-201ENST00000253812 LRP12Q9Y561 859 aa11.73□□□□□ -0.53
PCDHGA3-201ENST00000253812 A6NCN8 305 aa11.73□□□□□ -0.53
PCDHGA3-201ENST00000253812 OR2W5A6NFC9 320 aa11.73□□□□□ -0.53
PCDHGA3-201ENST00000253812 FUT6P51993 359 aa11.73□□□□□ -0.53
PCDHGA3-201ENST00000253812 ZNF121P58317 390 aaPredicted RBP11.73□□□□□ -0.53
PCDHGA3-201ENST00000253812 IRF3Q14653 427 aa11.73□□□□□ -0.53
PCDHGA3-201ENST00000253812 SPNS3Q6ZMD2 512 aa11.73□□□□□ -0.53
PCDHGA3-201ENST00000253812 OR2T6Q8NHC8 308 aa11.73□□□□□ -0.53
PCDHGA3-201ENST00000253812 RNF133Q8WVZ7 376 aa11.73□□□□□ -0.53
PCDHGA3-201ENST00000253812 MDKP21741 143 aaPredicted RBP11.73□□□□□ -0.53
PCDHGA3-201ENST00000253812 SRP14P37108 136 aaKnown RBP11.73□□□□□ -0.53
PCDHGA3-201ENST00000253812 DEFB133Q30KQ1 61 aa11.73□□□□□ -0.53
PCDHGA3-201ENST00000253812 NKAIN1Q4KMZ8 207 aa11.73□□□□□ -0.53
PCDHGA3-201ENST00000253812 C16orf82Q7Z2V1 217 aa11.73□□□□□ -0.53
PCDHGA3-201ENST00000253812 H1FOOQ8IZA3 346 aaPredicted RBP11.73□□□□□ -0.53
PCDHGA3-201ENST00000253812 D2HGDHQ8N465 521 aa11.73□□□□□ -0.53
PCDHGA3-201ENST00000253812 CYB561D1Q8N8Q1 229 aa11.73□□□□□ -0.53
PCDHGA3-201ENST00000253812 GALMQ96C23 342 aa11.73□□□□□ -0.53
PCDHGA3-201ENST00000253812 ASCC3Q8N3C0 2202 aaKnown RBP11.73□□□□□ -0.53
PCDHGA3-201ENST00000253812 SMPD2O60906 423 aa11.72□□□□□ -0.53
PCDHGA3-201ENST00000253812 TRAT1Q6PIZ9 186 aa11.72□□□□□ -0.53
PCDHGA3-201ENST00000253812 DEGS2Q6QHC5 323 aa11.72□□□□□ -0.53
PCDHGA3-201ENST00000253812 RPS4Y2Q8TD47 263 aa11.72□□□□□ -0.53
PCDHGA3-201ENST00000253812 MYEOVQ96EZ4 313 aa11.72□□□□□ -0.53
PCDHGA3-201ENST00000253812 RNF2Q99496 336 aa11.72□□□□□ -0.53
PCDHGA3-201ENST00000253812 GPA33Q99795 319 aa11.72□□□□□ -0.53
PCDHGA3-201ENST00000253812 PEF1Q9UBV8 284 aaKnown RBP11.72□□□□□ -0.53
PCDHGA3-201ENST00000253812 VDAC1P21796 283 aa11.72□□□□□ -0.53
PCDHGA3-201ENST00000253812 TBC1D28Q2M2D7 210 aa11.72□□□□□ -0.53
PCDHGA3-201ENST00000253812 SH2D2AQ9NP31 389 aa11.72□□□□□ -0.53
PCDHGA3-201ENST00000253812 B4E171 279 aa11.72□□□□□ -0.53
PCDHGA3-201ENST00000253812 ZNF749O43361 778 aa11.72□□□□□ -0.53
PCDHGA3-201ENST00000253812 OR8B8Q15620 311 aa11.72□□□□□ -0.53
PCDHGA3-201ENST00000253812 ADAMTSL4Q6UY14 1074 aa11.72□□□□□ -0.53
PCDHGA3-201ENST00000253812 NIT1Q86X76 327 aa11.72□□□□□ -0.53
PCDHGA3-201ENST00000253812 VN1R2Q8NFZ6 395 aa11.72□□□□□ -0.53
PCDHGA3-201ENST00000253812 OR2M3Q8NG83 312 aa11.72□□□□□ -0.53
PCDHGA3-201ENST00000253812 UBTD1Q9HAC8 227 aa11.72□□□□□ -0.53
PCDHGA3-201ENST00000253812 DUSP13Q9UII6 198 aa11.72□□□□□ -0.53
PCDHGA3-201ENST00000253812 CDC42EP3Q9UKI2 254 aa11.72□□□□□ -0.53
PCDHGA3-201ENST00000253812 GVINP1Q7Z2Y8 2422 aa11.72□□□□□ -0.53
PCDHGA3-201ENST00000253812 SIGLEC5O15389 551 aa11.72□□□□□ -0.53
PCDHGA3-201ENST00000253812 SYNGR2O43760 224 aa11.72□□□□□ -0.53
PCDHGA3-201ENST00000253812 CDS2O95674 445 aa11.72□□□□□ -0.53
PCDHGA3-201ENST00000253812 SCGB1A1P11684 91 aa11.72□□□□□ -0.53
PCDHGA3-201ENST00000253812 SELEP16581 610 aa11.72□□□□□ -0.53
PCDHGA3-201ENST00000253812 FAHP16930 419 aa11.72□□□□□ -0.53
PCDHGA3-201ENST00000253812 PPP2CAP67775 309 aa11.72□□□□□ -0.53
PCDHGA3-201ENST00000253812 LSM11P83369 360 aaKnown RBP eCLIP11.72□□□□□ -0.53
PCDHGA3-201ENST00000253812 SIGLEC14Q08ET2 396 aa11.72□□□□□ -0.53
PCDHGA3-201ENST00000253812 CD226Q15762 336 aa11.72□□□□□ -0.53
PCDHGA3-201ENST00000253812 KIRREL2Q6UWL6 708 aa11.72□□□□□ -0.53
PCDHGA3-201ENST00000253812 COL5A3P25940 1745 aaPredicted RBP11.72□□□□□ -0.53
PCDHGA3-201ENST00000253812 HSPB1P04792 205 aaKnown RBP11.71□□□□□ -0.53
PCDHGA3-201ENST00000253812 BCL2P10415 239 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms