RNA–Protein interactions for RNA: ENST00000252542.8

SAFB2-201, Transcript of scaffold attachment factor B2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAFB2, Length 3,371 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAFB2-201ENST00000252542 TMEM9BQ9NQ34 198 aa13.07□□□□□ -0.32
SAFB2-201ENST00000252542 EFSO43281 561 aa13.07□□□□□ -0.32
SAFB2-201ENST00000252542 TXNL1O43396 289 aa13.07□□□□□ -0.32
SAFB2-201ENST00000252542 FCGR2CP31995 323 aa13.07□□□□□ -0.32
SAFB2-201ENST00000252542 HOXA4Q00056 320 aaPredicted RBP13.07□□□□□ -0.32
SAFB2-201ENST00000252542 PEA15Q15121 130 aa13.07□□□□□ -0.32
SAFB2-201ENST00000252542 HFEQ30201 348 aa13.07□□□□□ -0.32
SAFB2-201ENST00000252542 KRBOX4Q5JUW0 171 aa13.07□□□□□ -0.32
SAFB2-201ENST00000252542 ETV3LQ6ZN32 361 aa13.07□□□□□ -0.32
SAFB2-201ENST00000252542 NIT2Q9NQR4 276 aa13.07□□□□□ -0.32
SAFB2-201ENST00000252542 AK3Q9UIJ7 227 aa13.07□□□□□ -0.32
SAFB2-201ENST00000252542 LDLRAD4O15165 306 aa13.06□□□□□ -0.32
SAFB2-201ENST00000252542 CD80P33681 288 aa13.06□□□□□ -0.32
SAFB2-201ENST00000252542 MRPS34P82930 218 aaKnown RBP13.06□□□□□ -0.32
SAFB2-201ENST00000252542 FAM76BQ5HYJ3 339 aa13.06□□□□□ -0.32
SAFB2-201ENST00000252542 DRAM2Q6UX65 266 aa13.06□□□□□ -0.32
SAFB2-201ENST00000252542 CALHM1Q8IU99 346 aa13.06□□□□□ -0.32
SAFB2-201ENST00000252542 BAP18Q8IXM2 172 aa13.06□□□□□ -0.32
SAFB2-201ENST00000252542 ZNF611Q8N823 705 aa13.06□□□□□ -0.32
SAFB2-201ENST00000252542 SULT4A1Q9BR01 284 aa13.06□□□□□ -0.32
SAFB2-201ENST00000252542 CHST5Q9GZS9 411 aa13.06□□□□□ -0.32
SAFB2-201ENST00000252542 C5orf66Q9H5L9 145 aa13.06□□□□□ -0.32
SAFB2-201ENST00000252542 SH3BGRL2Q9UJC5 107 aa13.06□□□□□ -0.32
SAFB2-201ENST00000252542 NEURL1O76050 574 aa13.06□□□□□ -0.32
SAFB2-201ENST00000252542 ZNF44P15621 663 aa13.06□□□□□ -0.32
SAFB2-201ENST00000252542 RAB6AP20340 208 aa13.06□□□□□ -0.32
SAFB2-201ENST00000252542 PSMB6P28072 239 aa13.06□□□□□ -0.32
SAFB2-201ENST00000252542 CEBPGP53567 150 aa13.06□□□□□ -0.32
SAFB2-201ENST00000252542 RAB32Q13637 225 aa13.06□□□□□ -0.32
SAFB2-201ENST00000252542 TRIP6Q15654 476 aaKnown RBP13.06□□□□□ -0.32
SAFB2-201ENST00000252542 NUFIP2Q7Z417 695 aaKnown RBP13.06□□□□□ -0.32
SAFB2-201ENST00000252542 MYPOPQ86VE0 399 aaPredicted RBP13.06□□□□□ -0.32
SAFB2-201ENST00000252542 OR11L1Q8NGX0 322 aa13.06□□□□□ -0.32
SAFB2-201ENST00000252542 HAS2Q92819 552 aa13.06□□□□□ -0.32
SAFB2-201ENST00000252542 C14orf79Q96F83 325 aa13.06□□□□□ -0.32
SAFB2-201ENST00000252542 FAM173AQ9BQD7 235 aa13.06□□□□□ -0.32
SAFB2-201ENST00000252542 WNT5BQ9H1J7 359 aa13.06□□□□□ -0.32
SAFB2-201ENST00000252542 FN3KRPQ9HA64 309 aa13.06□□□□□ -0.32
SAFB2-201ENST00000252542 BARX1Q9HBU1 254 aaPredicted RBP13.06□□□□□ -0.32
SAFB2-201ENST00000252542 OR14J1Q9UGF5 321 aa13.06□□□□□ -0.32
SAFB2-201ENST00000252542 IGLV3-32A0A0A0MS00 114 aa13.06□□□□□ -0.32
SAFB2-201ENST00000252542 MECP2P51608 486 aaKnown RBP13.06□□□□□ -0.32
SAFB2-201ENST00000252542 SLC10A1Q14973 349 aa13.06□□□□□ -0.32
SAFB2-201ENST00000252542 RAB35Q15286 201 aa13.06□□□□□ -0.32
SAFB2-201ENST00000252542 SFT2D1Q8WV19 159 aa13.06□□□□□ -0.32
SAFB2-201ENST00000252542 RNF141Q8WVD5 230 aa13.06□□□□□ -0.32
SAFB2-201ENST00000252542 CPNE4Q96A23 557 aaPredicted RBP13.06□□□□□ -0.32
SAFB2-201ENST00000252542 PLPPR2Q96GM1 343 aa13.06□□□□□ -0.32
SAFB2-201ENST00000252542 RPS10P5Q9NQ39 176 aa13.06□□□□□ -0.32
SAFB2-201ENST00000252542 GTF3C1Q12789 2109 aa13.05□□□□□ -0.32
SAFB2-201ENST00000252542 IGKV1-27A0A075B6S5 117 aa13.05□□□□□ -0.32
SAFB2-201ENST00000252542 M0R036 132 aa13.05□□□□□ -0.32
SAFB2-201ENST00000252542 CDX4O14627 284 aaPredicted RBP13.05□□□□□ -0.32
SAFB2-201ENST00000252542 WISP2O76076 250 aa13.05□□□□□ -0.32
SAFB2-201ENST00000252542 DKK1O94907 266 aa13.05□□□□□ -0.32
SAFB2-201ENST00000252542 THBS4P35443 961 aa13.05□□□□□ -0.32
SAFB2-201ENST00000252542 SCAND1P57086 179 aa13.05□□□□□ -0.32
SAFB2-201ENST00000252542 HERV-K104P61576 105 aa13.05□□□□□ -0.32
SAFB2-201ENST00000252542 CNN3Q15417 329 aaKnown RBP13.05□□□□□ -0.32
SAFB2-201ENST00000252542 OR5AP2Q8NGF4 316 aa13.05□□□□□ -0.32
SAFB2-201ENST00000252542 ZFP57Q9NU63 452 aa13.05□□□□□ -0.32
SAFB2-201ENST00000252542 MED6O75586 246 aa13.05□□□□□ -0.32
SAFB2-201ENST00000252542 CD59P13987 128 aa13.05□□□□□ -0.32
SAFB2-201ENST00000252542 EPHA1P21709 976 aa13.05□□□□□ -0.32
SAFB2-201ENST00000252542 ID4P47928 161 aa13.05□□□□□ -0.32
SAFB2-201ENST00000252542 PPT1P50897 306 aa13.05□□□□□ -0.32
SAFB2-201ENST00000252542 PIGPP57054 158 aa13.05□□□□□ -0.32
SAFB2-201ENST00000252542 ANKRD55Q3KP44 614 aa13.05□□□□□ -0.32
SAFB2-201ENST00000252542 RBMS3Q6XE24 437 aaKnown RBP13.05□□□□□ -0.32
SAFB2-201ENST00000252542 KCNE4Q8WWG9 221 aa13.05□□□□□ -0.32
SAFB2-201ENST00000252542 PP6455Q8WZ26 134 aa13.05□□□□□ -0.32
SAFB2-201ENST00000252542 STARD10Q9Y365 291 aa13.05□□□□□ -0.32
SAFB2-201ENST00000252542 TLN1Q9Y490 2541 aaKnown RBP13.05□□□□□ -0.32
SAFB2-201ENST00000252542 LOC102725191A0A1B0GVB3 256 aa13.04□□□□□ -0.32
SAFB2-201ENST00000252542 ZNF716A6NP11 495 aa13.04□□□□□ -0.32
SAFB2-201ENST00000252542 ZNF732B4DXR9 585 aa13.04□□□□□ -0.32
SAFB2-201ENST00000252542 B4E171 279 aa13.04□□□□□ -0.32
SAFB2-201ENST00000252542 IGHEP01854 428 aa13.04□□□□□ -0.32
SAFB2-201ENST00000252542 GRPP07492 148 aa13.04□□□□□ -0.32
SAFB2-201ENST00000252542 CA6P23280 308 aa13.04□□□□□ -0.32
SAFB2-201ENST00000252542 TSPAN7P41732 249 aa13.04□□□□□ -0.32
SAFB2-201ENST00000252542 MALLQ13021 153 aa13.04□□□□□ -0.32
SAFB2-201ENST00000252542 SLC25A42Q86VD7 318 aa13.04□□□□□ -0.32
SAFB2-201ENST00000252542 INTS12Q96CB8 462 aaKnown RBP13.04□□□□□ -0.32
SAFB2-201ENST00000252542 C19orf67A6NJJ6 358 aa13.04□□□□□ -0.32
SAFB2-201ENST00000252542 A6NLC8 198 aa13.04□□□□□ -0.32
SAFB2-201ENST00000252542 SNRNP70P08621 437 aaKnown RBP13.04□□□□□ -0.32
SAFB2-201ENST00000252542 GSTP1P09211 210 aaKnown RBP13.04□□□□□ -0.32
SAFB2-201ENST00000252542 ZBTB25P24278 435 aa13.04□□□□□ -0.32
SAFB2-201ENST00000252542 ACP1P24666 158 aa13.04□□□□□ -0.32
SAFB2-201ENST00000252542 FKBP2P26885 142 aaKnown RBP13.04□□□□□ -0.32
SAFB2-201ENST00000252542 B3GALT5-AS1P59052 145 aa13.04□□□□□ -0.32
SAFB2-201ENST00000252542 ALKBH6Q3KRA9 238 aa13.04□□□□□ -0.32
SAFB2-201ENST00000252542 TMEM128Q5BJH2 165 aa13.04□□□□□ -0.32
SAFB2-201ENST00000252542 SGPP2Q8IWX5 399 aa13.04□□□□□ -0.32
SAFB2-201ENST00000252542 MRGPRFQ96AM1 343 aa13.04□□□□□ -0.32
SAFB2-201ENST00000252542 ZC3H10Q96K80 434 aaKnown RBP13.04□□□□□ -0.32
SAFB2-201ENST00000252542 OR10C1Q96KK4 312 aa13.04□□□□□ -0.32
SAFB2-201ENST00000252542 UFSP2Q9NUQ7 469 aa13.04□□□□□ -0.32
SAFB2-201ENST00000252542 NPIPB13A6NJU9 1138 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms