RNA–Protein interactions for RNA: ENST00000241393.3

CXCR4-201, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CXCR4, Length 1,682 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-201ENST00000241393 ICAM2P13598 275 aa6.8□□□□□ -1.32
CXCR4-201ENST00000241393 SRD5A2P31213 254 aa6.8□□□□□ -1.32
CXCR4-201ENST00000241393 TSPAN7P41732 249 aa6.8□□□□□ -1.32
CXCR4-201ENST00000241393 STARP49675 285 aa6.8□□□□□ -1.32
CXCR4-201ENST00000241393 ATP1B3P54709 279 aa6.8□□□□□ -1.32
CXCR4-201ENST00000241393 ARFRP1Q13795 201 aa6.8□□□□□ -1.32
CXCR4-201ENST00000241393 RAB35Q15286 201 aa6.8□□□□□ -1.32
CXCR4-201ENST00000241393 SLC22A6Q4U2R8 563 aa6.8□□□□□ -1.32
CXCR4-201ENST00000241393 PAN3Q58A45 887 aaKnown RBP6.8□□□□□ -1.32
CXCR4-201ENST00000241393 RAET1LQ5VY80 246 aa6.8□□□□□ -1.32
CXCR4-201ENST00000241393 UQCC3Q6UW78 93 aa6.8□□□□□ -1.32
CXCR4-201ENST00000241393 GLRX5Q86SX6 157 aa6.8□□□□□ -1.32
CXCR4-201ENST00000241393 RPS19BP1Q86WX3 136 aaKnown RBP6.8□□□□□ -1.32
CXCR4-201ENST00000241393 GPR137CQ8N3F9 429 aa6.8□□□□□ -1.32
CXCR4-201ENST00000241393 TMEM156Q8N614 296 aa6.8□□□□□ -1.32
CXCR4-201ENST00000241393 SPERTQ8NA61 448 aa6.8□□□□□ -1.32
CXCR4-201ENST00000241393 ADAD2Q8NCV1 583 aaKnown RBP6.8□□□□□ -1.32
CXCR4-201ENST00000241393 MARCH1Q8TCQ1 289 aa6.8□□□□□ -1.32
CXCR4-201ENST00000241393 NPIPB3Q92617 1050 aa6.8□□□□□ -1.32
CXCR4-201ENST00000241393 EMG1Q92979 244 aaKnown RBP6.8□□□□□ -1.32
CXCR4-201ENST00000241393 ZNF799Q96GE5 643 aa6.8□□□□□ -1.32
CXCR4-201ENST00000241393 ARHGAP5-AS1Q96IT6 56 aa6.8□□□□□ -1.32
CXCR4-201ENST00000241393 LYZL4Q96KX0 146 aa6.8□□□□□ -1.32
CXCR4-201ENST00000241393 ULBP2Q9BZM5 246 aa6.8□□□□□ -1.32
CXCR4-201ENST00000241393 C5orf66Q9H5L9 145 aa6.8□□□□□ -1.32
CXCR4-201ENST00000241393 AKIRIN1Q9H9L7 192 aaPredicted RBP6.8□□□□□ -1.32
CXCR4-201ENST00000241393 SAP30LQ9HAJ7 183 aa6.8□□□□□ -1.32
CXCR4-201ENST00000241393 CHMP1AQ9HD42 196 aaPredicted RBP6.8□□□□□ -1.32
CXCR4-201ENST00000241393 HPF1Q9NWY4 346 aa6.8□□□□□ -1.32
CXCR4-201ENST00000241393 OSGIN2Q9Y236 505 aa6.8□□□□□ -1.32
CXCR4-201ENST00000241393 PI4KAP42356 2102 aa6.8□□□□□ -1.32
CXCR4-201ENST00000241393 NSG1A0A0A6YYJ2 146 aa6.79□□□□□ -1.32
CXCR4-201ENST00000241393 C5orf51A6NDU8 294 aa6.79□□□□□ -1.32
CXCR4-201ENST00000241393 CCSO14618 274 aa6.79□□□□□ -1.32
CXCR4-201ENST00000241393 RAD51DO75771 328 aa6.79□□□□□ -1.32
CXCR4-201ENST00000241393 WDPCPO95876 746 aa6.79□□□□□ -1.32
CXCR4-201ENST00000241393 CST2P09228 141 aa6.79□□□□□ -1.32
CXCR4-201ENST00000241393 PET100P0DJ07 73 aa6.79□□□□□ -1.32
CXCR4-201ENST00000241393 AKR1C4P17516 323 aa6.79□□□□□ -1.32
CXCR4-201ENST00000241393 KLK2P20151 261 aa6.79□□□□□ -1.32
CXCR4-201ENST00000241393 CNR1P21554 472 aa6.79□□□□□ -1.32
CXCR4-201ENST00000241393 PRKACBP22694 351 aa6.79□□□□□ -1.32
CXCR4-201ENST00000241393 CRYGSP22914 178 aa6.79□□□□□ -1.32
CXCR4-201ENST00000241393 AVPR2P30518 371 aa6.79□□□□□ -1.32
CXCR4-201ENST00000241393 OR3A2P47893 321 aa6.79□□□□□ -1.32
CXCR4-201ENST00000241393 LUMP51884 338 aaPredicted RBP6.79□□□□□ -1.32
CXCR4-201ENST00000241393 ZXDAP98168 799 aa6.79□□□□□ -1.32
CXCR4-201ENST00000241393 SCRN3Q0VDG4 424 aa6.79□□□□□ -1.32
CXCR4-201ENST00000241393 CHAF1BQ13112 559 aa6.79□□□□□ -1.32
CXCR4-201ENST00000241393 SNTB1Q13884 538 aaKnown RBP6.79□□□□□ -1.32
CXCR4-201ENST00000241393 HYAL4Q2M3T9 481 aa6.79□□□□□ -1.32
CXCR4-201ENST00000241393 RIPPLY2Q5TAB7 128 aa6.79□□□□□ -1.32
CXCR4-201ENST00000241393 IGFL4Q6B9Z1 124 aa6.79□□□□□ -1.32
CXCR4-201ENST00000241393 TFAP2EQ6VUC0 442 aa6.79□□□□□ -1.32
CXCR4-201ENST00000241393 ZIC4Q8N9L1 334 aa6.79□□□□□ -1.32
CXCR4-201ENST00000241393 SLC30A7Q8NEW0 376 aa6.79□□□□□ -1.32
CXCR4-201ENST00000241393 OR5AP2Q8NGF4 316 aa6.79□□□□□ -1.32
CXCR4-201ENST00000241393 OR51T1Q8NGJ9 327 aa6.79□□□□□ -1.32
CXCR4-201ENST00000241393 OR10K1Q8NGX5 313 aa6.79□□□□□ -1.32
CXCR4-201ENST00000241393 LHFPL5Q8TAF8 219 aa6.79□□□□□ -1.32
CXCR4-201ENST00000241393 CASTOR1Q8WTX7 329 aa6.79□□□□□ -1.32
CXCR4-201ENST00000241393 TMEM230Q96A57 120 aa6.79□□□□□ -1.32
CXCR4-201ENST00000241393 SEC22AQ96IW7 307 aa6.79□□□□□ -1.32
CXCR4-201ENST00000241393 ZNF385AQ96PM9 386 aaKnown RBP6.79□□□□□ -1.32
CXCR4-201ENST00000241393 SPACA5Q96QH8 159 aa6.79□□□□□ -1.32
CXCR4-201ENST00000241393 S100A13Q99584 98 aa6.79□□□□□ -1.32
CXCR4-201ENST00000241393 ZNF471Q9BX82 626 aaPredicted RBP6.79□□□□□ -1.32
CXCR4-201ENST00000241393 WDR13Q9H1Z4 485 aa6.79□□□□□ -1.32
CXCR4-201ENST00000241393 PIGMQ9H3S5 423 aa6.79□□□□□ -1.32
CXCR4-201ENST00000241393 BANF2Q9H503 90 aa6.79□□□□□ -1.32
CXCR4-201ENST00000241393 MBD2Q9UBB5 411 aa6.79□□□□□ -1.32
CXCR4-201ENST00000241393 MRPS18CQ9Y3D5 142 aaKnown RBP6.79□□□□□ -1.32
CXCR4-201ENST00000241393 SDK1Q7Z5N4 2213 aa6.79□□□□□ -1.32
CXCR4-201ENST00000241393 LOC100509620A0A075B734 347 aa6.78□□□□□ -1.32
CXCR4-201ENST00000241393 A0A0J9YW62 118 aa6.78□□□□□ -1.32
CXCR4-201ENST00000241393 RAB19A4D1S5 217 aa6.78□□□□□ -1.32
CXCR4-201ENST00000241393 FAM25EA8MYX2 175 aa6.78□□□□□ -1.32
CXCR4-201ENST00000241393 F5H0A9 414 aaPredicted RBP6.78□□□□□ -1.32
CXCR4-201ENST00000241393 F5H5K5 113 aa6.78□□□□□ -1.32
CXCR4-201ENST00000241393 STMND1H3BQB6 276 aa6.78□□□□□ -1.32
CXCR4-201ENST00000241393 TEX46H3BTG2 121 aa6.78□□□□□ -1.32
CXCR4-201ENST00000241393 SCO1O75880 301 aa6.78□□□□□ -1.32
CXCR4-201ENST00000241393 LIPCP11150 499 aa6.78□□□□□ -1.32
CXCR4-201ENST00000241393 TPT1P13693 172 aaKnown RBP6.78□□□□□ -1.32
CXCR4-201ENST00000241393 BLVRBP30043 206 aaPredicted RBP6.78□□□□□ -1.32
CXCR4-201ENST00000241393 SNU13P55769 128 aaKnown RBP6.78□□□□□ -1.32
CXCR4-201ENST00000241393 VAMP2P63027 116 aa6.78□□□□□ -1.32
CXCR4-201ENST00000241393 FHL2Q14192 279 aa6.78□□□□□ -1.32
CXCR4-201ENST00000241393 UBE2V2Q15819 145 aa6.78□□□□□ -1.32
CXCR4-201ENST00000241393 STK11Q15831 433 aa6.78□□□□□ -1.32
CXCR4-201ENST00000241393 RSPO1Q2MKA7 263 aaPredicted RBP6.78□□□□□ -1.32
CXCR4-201ENST00000241393 KRTAP27-1Q3LI81 207 aa6.78□□□□□ -1.32
CXCR4-201ENST00000241393 PHYHD1Q5SRE7 291 aa6.78□□□□□ -1.32
CXCR4-201ENST00000241393 PRSS54Q6PEW0 395 aa6.78□□□□□ -1.32
CXCR4-201ENST00000241393 CLEC18BQ6UXF7 455 aa6.78□□□□□ -1.32
CXCR4-201ENST00000241393 KCTD9Q7L273 389 aa6.78□□□□□ -1.32
CXCR4-201ENST00000241393 RNF144BQ7Z419 303 aa6.78□□□□□ -1.32
CXCR4-201ENST00000241393 ZNF100Q8IYN0 542 aa6.78□□□□□ -1.32
CXCR4-201ENST00000241393 SLC38A6Q8IZM9 456 aa6.78□□□□□ -1.32
CXCR4-201ENST00000241393 MAFAQ8NHW3 353 aaPredicted RBP6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms