RNA–Protein interactions for RNA: ENST00000233468.4

SF3B6-201, Transcript of splicing factor 3b subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B6, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-201ENST00000233468 NDUFB7P17568 137 aa9.36□□□□□ -0.91
SF3B6-201ENST00000233468 MTNR1BP49286 362 aa9.36□□□□□ -0.91
SF3B6-201ENST00000233468 CAV3P56539 151 aa9.36□□□□□ -0.91
SF3B6-201ENST00000233468 RPS11P62280 158 aaKnown RBP eCLIP9.36□□□□□ -0.91
SF3B6-201ENST00000233468 HOXA4Q00056 320 aaPredicted RBP9.36□□□□□ -0.91
SF3B6-201ENST00000233468 GPR176Q14439 515 aa9.36□□□□□ -0.91
SF3B6-201ENST00000233468 KCTD21Q4G0X4 260 aa9.36□□□□□ -0.91
SF3B6-201ENST00000233468 DDI2Q5TDH0 399 aa9.36□□□□□ -0.91
SF3B6-201ENST00000233468 LIPKQ5VXJ0 399 aa9.36□□□□□ -0.91
SF3B6-201ENST00000233468 BTN2A1Q7KYR7 527 aa9.36□□□□□ -0.91
SF3B6-201ENST00000233468 CMTM4Q8IZR5 234 aa9.36□□□□□ -0.91
SF3B6-201ENST00000233468 FAM216BQ8N7L0 139 aa9.36□□□□□ -0.91
SF3B6-201ENST00000233468 TMEM185AQ8NFB2 350 aa9.36□□□□□ -0.91
SF3B6-201ENST00000233468 OR5D13Q8NGL4 314 aa9.36□□□□□ -0.91
SF3B6-201ENST00000233468 OR13C5Q8NGS8 318 aa9.36□□□□□ -0.91
SF3B6-201ENST00000233468 TNFAIP8L1Q8WVP5 186 aa9.36□□□□□ -0.91
SF3B6-201ENST00000233468 SGCDQ92629 289 aa9.36□□□□□ -0.91
SF3B6-201ENST00000233468 RFT1Q96AA3 541 aa9.36□□□□□ -0.91
SF3B6-201ENST00000233468 FOXRED1Q96CU9 486 aaPredicted RBP9.36□□□□□ -0.91
SF3B6-201ENST00000233468 SEH1LQ96EE3 360 aa9.36□□□□□ -0.91
SF3B6-201ENST00000233468 ZNF488Q96MN9 340 aa9.36□□□□□ -0.91
SF3B6-201ENST00000233468 GAFA1Q96PS6 74 aa9.36□□□□□ -0.91
SF3B6-201ENST00000233468 DERL3Q96Q80 235 aa9.36□□□□□ -0.91
SF3B6-201ENST00000233468 C19orf24Q9BVV8 132 aa9.36□□□□□ -0.91
SF3B6-201ENST00000233468 FAM192AQ9GZU8 254 aa9.36□□□□□ -0.91
SF3B6-201ENST00000233468 FAM234AQ9H0X4 552 aa9.36□□□□□ -0.91
SF3B6-201ENST00000233468 ELL3Q9HB65 397 aaPredicted RBP9.36□□□□□ -0.91
SF3B6-201ENST00000233468 ACOT13Q9NPJ3 140 aa9.36□□□□□ -0.91
SF3B6-201ENST00000233468 CTSZQ9UBR2 303 aa9.36□□□□□ -0.91
SF3B6-201ENST00000233468 OR14J1Q9UGF5 321 aa9.36□□□□□ -0.91
SF3B6-201ENST00000233468 DYSFO75923 2080 aa9.35□□□□□ -0.91
SF3B6-201ENST00000233468 SH2D1BO14796 132 aa9.35□□□□□ -0.91
SF3B6-201ENST00000233468 INMTO95050 263 aa9.35□□□□□ -0.91
SF3B6-201ENST00000233468 CSTBP04080 98 aaKnown RBP9.35□□□□□ -0.91
SF3B6-201ENST00000233468 PRKACAP17612 351 aa9.35□□□□□ -0.91
SF3B6-201ENST00000233468 IGFBP3P17936 291 aaPredicted RBP9.35□□□□□ -0.91
SF3B6-201ENST00000233468 BCL3P20749 454 aa9.35□□□□□ -0.91
SF3B6-201ENST00000233468 GABRA5P31644 462 aa9.35□□□□□ -0.91
SF3B6-201ENST00000233468 PTGFRP43088 359 aa9.35□□□□□ -0.91
SF3B6-201ENST00000233468 MAP2K4P45985 399 aa9.35□□□□□ -0.91
SF3B6-201ENST00000233468 EMX1Q04741 257 aaPredicted RBP9.35□□□□□ -0.91
SF3B6-201ENST00000233468 PAX8Q06710 450 aa9.35□□□□□ -0.91
SF3B6-201ENST00000233468 BLMHQ13867 455 aa9.35□□□□□ -0.91
SF3B6-201ENST00000233468 ZNF146Q15072 292 aa9.35□□□□□ -0.91
SF3B6-201ENST00000233468 RSU1Q15404 277 aa9.35□□□□□ -0.91
SF3B6-201ENST00000233468 DGUOKQ16854 277 aa9.35□□□□□ -0.91
SF3B6-201ENST00000233468 HSD17B12Q53GQ0 312 aa9.35□□□□□ -0.91
SF3B6-201ENST00000233468 ARMCX4Q5H9R4 360 aa9.35□□□□□ -0.91
SF3B6-201ENST00000233468 METTL11BQ5VVY1 283 aa9.35□□□□□ -0.91
SF3B6-201ENST00000233468 ZNF773Q6PK81 442 aa9.35□□□□□ -0.91
SF3B6-201ENST00000233468 C1QL2Q7Z5L3 287 aa9.35□□□□□ -0.91
SF3B6-201ENST00000233468 CEACAM19Q7Z692 300 aa9.35□□□□□ -0.91
SF3B6-201ENST00000233468 OR52N4Q8NGI2 321 aa9.35□□□□□ -0.91
SF3B6-201ENST00000233468 OR5D18Q8NGL1 313 aa9.35□□□□□ -0.91
SF3B6-201ENST00000233468 H1FXQ92522 213 aaKnown RBP9.35□□□□□ -0.91
SF3B6-201ENST00000233468 SPACA5Q96QH8 159 aa9.35□□□□□ -0.91
SF3B6-201ENST00000233468 TMPRSS13Q9BYE2 586 aa9.35□□□□□ -0.91
SF3B6-201ENST00000233468 METTL9Q9H1A3 318 aa9.35□□□□□ -0.91
SF3B6-201ENST00000233468 CNTD2Q9H8S5 307 aa9.35□□□□□ -0.91
SF3B6-201ENST00000233468 VCX3AQ9NNX9 186 aa9.35□□□□□ -0.91
SF3B6-201ENST00000233468 HMG20AQ9NP66 347 aa9.35□□□□□ -0.91
SF3B6-201ENST00000233468 NOX4Q9NPH5 578 aa9.35□□□□□ -0.91
SF3B6-201ENST00000233468 MMP26Q9NRE1 261 aa9.35□□□□□ -0.91
SF3B6-201ENST00000233468 RPUSD1Q9UJJ7 312 aaKnown RBP9.35□□□□□ -0.91
SF3B6-201ENST00000233468 ZNF222Q9UK12 451 aa9.35□□□□□ -0.91
SF3B6-201ENST00000233468 hCG_1809904A0A1W2PP81 198 aa9.34□□□□□ -0.91
SF3B6-201ENST00000233468 A0A1W2PPE2 198 aa9.34□□□□□ -0.91
SF3B6-201ENST00000233468 A0A1W2PPK0 400 aa9.34□□□□□ -0.91
SF3B6-201ENST00000233468 A0A1W2PR64 198 aa9.34□□□□□ -0.91
SF3B6-201ENST00000233468 A0A1W2PRV1 198 aa9.34□□□□□ -0.91
SF3B6-201ENST00000233468 FUOMA2VDF0 154 aa9.34□□□□□ -0.91
SF3B6-201ENST00000233468 H3BUI4 141 aa9.34□□□□□ -0.91
SF3B6-201ENST00000233468 ANGPTL7O43827 346 aa9.34□□□□□ -0.91
SF3B6-201ENST00000233468 RGS9O75916 674 aaPredicted RBP9.34□□□□□ -0.91
SF3B6-201ENST00000233468 TNFAIP8O95379 198 aa9.34□□□□□ -0.91
SF3B6-201ENST00000233468 HAND1O96004 215 aa9.34□□□□□ -0.91
SF3B6-201ENST00000233468 MAS1P04201 325 aa9.34□□□□□ -0.91
SF3B6-201ENST00000233468 FPR2P25090 351 aa9.34□□□□□ -0.91
SF3B6-201ENST00000233468 BPIFB3P59826 476 aa9.34□□□□□ -0.91
SF3B6-201ENST00000233468 ZP1P60852 638 aa9.34□□□□□ -0.91
SF3B6-201ENST00000233468 PAX2Q02962 417 aa9.34□□□□□ -0.91
SF3B6-201ENST00000233468 UBE2UQ5VVX9 321 aa9.34□□□□□ -0.91
SF3B6-201ENST00000233468 GLT8D1Q68CQ7 371 aa9.34□□□□□ -0.91
SF3B6-201ENST00000233468 ELP2Q6IA86 826 aa9.34□□□□□ -0.91
SF3B6-201ENST00000233468 UNQ9370/PRO34162Q6UXP9 181 aa9.34□□□□□ -0.91
SF3B6-201ENST00000233468 SPARTQ8N0X7 666 aa9.34□□□□□ -0.91
SF3B6-201ENST00000233468 JAGN1Q8N5M9 183 aa9.34□□□□□ -0.91
SF3B6-201ENST00000233468 CD177Q8N6Q3 437 aa9.34□□□□□ -0.91
SF3B6-201ENST00000233468 ASCC1Q8N9N2 400 aaKnown RBP9.34□□□□□ -0.91
SF3B6-201ENST00000233468 CHST4Q8NCG5 386 aa9.34□□□□□ -0.91
SF3B6-201ENST00000233468 ZNRF1Q8ND25 227 aa9.34□□□□□ -0.91
SF3B6-201ENST00000233468 OR51A2Q8NGJ7 313 aa9.34□□□□□ -0.91
SF3B6-201ENST00000233468 SNX22Q96L94 193 aa9.34□□□□□ -0.91
SF3B6-201ENST00000233468 UQCC2Q9BRT2 126 aa9.34□□□□□ -0.91
SF3B6-201ENST00000233468 DCTN5Q9BTE1 182 aa9.34□□□□□ -0.91
SF3B6-201ENST00000233468 EXOSC4Q9NPD3 245 aaKnown RBP9.34□□□□□ -0.91
SF3B6-201ENST00000233468 RBFOX1Q9NWB1 397 aaKnown RBP9.34□□□□□ -0.91
SF3B6-201ENST00000233468 GHRLQ9UBU3 117 aa9.34□□□□□ -0.91
SF3B6-201ENST00000233468 ING4Q9UNL4 249 aa9.34□□□□□ -0.91
SF3B6-201ENST00000233468 MAB21L2Q9Y586 359 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms