RNA–Protein interactions for RNA: ENST00000229829.6

HLA-DOA-201, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DOA, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-201ENST00000229829 CRTAPO75718 401 aaPredicted RBP8.23□□□□□ -1.09
HLA-DOA-201ENST00000229829 TIAF1O95411 115 aa8.23□□□□□ -1.09
HLA-DOA-201ENST00000229829 HIST1H1DP16402 221 aaKnown RBP8.23□□□□□ -1.09
HLA-DOA-201ENST00000229829 CLRN1P58418 232 aa8.23□□□□□ -1.09
HLA-DOA-201ENST00000229829 HNF4GQ14541 408 aa8.23□□□□□ -1.09
HLA-DOA-201ENST00000229829 PRSS54Q6PEW0 395 aa8.23□□□□□ -1.09
HLA-DOA-201ENST00000229829 HEPN1Q6WQI6 88 aa8.23□□□□□ -1.09
HLA-DOA-201ENST00000229829 ZNF574Q6ZN55 896 aaPredicted RBP8.23□□□□□ -1.09
HLA-DOA-201ENST00000229829 FAM57BQ71RH2 274 aa8.23□□□□□ -1.09
HLA-DOA-201ENST00000229829 SYT13Q7L8C5 426 aa8.23□□□□□ -1.09
HLA-DOA-201ENST00000229829 PEG10Q86TG7 708 aaKnown RBP8.23□□□□□ -1.09
HLA-DOA-201ENST00000229829 POC1BQ8TC44 478 aa8.23□□□□□ -1.09
HLA-DOA-201ENST00000229829 SMIM8Q96KF7 97 aa8.23□□□□□ -1.09
HLA-DOA-201ENST00000229829 GPER1Q99527 375 aa8.23□□□□□ -1.09
HLA-DOA-201ENST00000229829 MUC3AQ02505 3323 aa8.23□□□□□ -1.09
HLA-DOA-201ENST00000229829 FRYQ5TBA9 3013 aa8.23□□□□□ -1.09
HLA-DOA-201ENST00000229829 PET100P0DJ07 73 aa8.23□□□□□ -1.09
HLA-DOA-201ENST00000229829 SULT1A2P50226 295 aa8.23□□□□□ -1.09
HLA-DOA-201ENST00000229829 MLF1P58340 268 aa8.23□□□□□ -1.09
HLA-DOA-201ENST00000229829 ERVFRD-1P60508 538 aa8.23□□□□□ -1.09
HLA-DOA-201ENST00000229829 HNRNPKP61978 463 aaKnown RBP eCLIP8.23□□□□□ -1.09
HLA-DOA-201ENST00000229829 DLK1P80370 383 aa8.23□□□□□ -1.09
HLA-DOA-201ENST00000229829 BTNL8Q6UX41 500 aa8.23□□□□□ -1.09
HLA-DOA-201ENST00000229829 CPEB2Q7Z5Q1 589 aaKnown RBP8.23□□□□□ -1.09
HLA-DOA-201ENST00000229829 OR13G1Q8NGZ3 307 aa8.23□□□□□ -1.09
HLA-DOA-201ENST00000229829 HAS2Q92819 552 aa8.23□□□□□ -1.09
HLA-DOA-201ENST00000229829 TMEM59Q9BXS4 323 aa8.23□□□□□ -1.09
HLA-DOA-201ENST00000229829 NMES1Q9C002 83 aa8.23□□□□□ -1.09
HLA-DOA-201ENST00000229829 LMAN1LQ9HAT1 526 aa8.23□□□□□ -1.09
HLA-DOA-201ENST00000229829 C19orf12Q9NSK7 152 aa8.23□□□□□ -1.09
HLA-DOA-201ENST00000229829 KLHL13Q9P2N7 655 aa8.23□□□□□ -1.09
HLA-DOA-201ENST00000229829 B3GALT5Q9Y2C3 310 aa8.23□□□□□ -1.09
HLA-DOA-201ENST00000229829 MEMO1Q9Y316 297 aa8.23□□□□□ -1.09
HLA-DOA-201ENST00000229829 TRBV6-7A0A0A0MS04 114 aa8.23□□□□□ -1.09
HLA-DOA-201ENST00000229829 MARCH11A6NNE9 402 aa8.23□□□□□ -1.09
HLA-DOA-201ENST00000229829 M0R143 59 aa8.23□□□□□ -1.09
HLA-DOA-201ENST00000229829 PTBP3O95758 552 aaKnown RBP8.23□□□□□ -1.09
HLA-DOA-201ENST00000229829 SFTPDP35247 375 aa8.23□□□□□ -1.09
HLA-DOA-201ENST00000229829 TRA2AQ13595 282 aaKnown RBP eCLIP8.23□□□□□ -1.09
HLA-DOA-201ENST00000229829 OR5I1Q13606 314 aa8.23□□□□□ -1.09
HLA-DOA-201ENST00000229829 AADACL3Q5VUY0 350 aa8.23□□□□□ -1.09
HLA-DOA-201ENST00000229829 RTL6Q6ICC9 239 aa8.23□□□□□ -1.09
HLA-DOA-201ENST00000229829 PLXDC2Q6UX71 529 aa8.23□□□□□ -1.09
HLA-DOA-201ENST00000229829 CARFQ8N187 725 aa8.23□□□□□ -1.09
HLA-DOA-201ENST00000229829 PLPP5Q8NEB5 264 aa8.23□□□□□ -1.09
HLA-DOA-201ENST00000229829 NFAM1Q8NET5 270 aaPredicted RBP8.23□□□□□ -1.09
HLA-DOA-201ENST00000229829 OR10G3Q8NGC4 313 aa8.23□□□□□ -1.09
HLA-DOA-201ENST00000229829 OR2AJ1Q8NGZ0 328 aa8.23□□□□□ -1.09
HLA-DOA-201ENST00000229829 FAM210BQ96KR6 192 aa8.23□□□□□ -1.09
HLA-DOA-201ENST00000229829 TAAR9Q96RI9 348 aa8.23□□□□□ -1.09
HLA-DOA-201ENST00000229829 NDUFAF3Q9BU61 184 aa8.23□□□□□ -1.09
HLA-DOA-201ENST00000229829 LIPGQ9Y5X9 500 aa8.23□□□□□ -1.09
HLA-DOA-201ENST00000229829 TRBV11-1A0A0K0K1C0 115 aa8.22□□□□□ -1.09
HLA-DOA-201ENST00000229829 ZNF878C9JN71 531 aa8.22□□□□□ -1.09
HLA-DOA-201ENST00000229829 IFNL4K9M1U5 179 aa8.22□□□□□ -1.09
HLA-DOA-201ENST00000229829 AMY2BP19961 511 aa8.22□□□□□ -1.09
HLA-DOA-201ENST00000229829 NAAAQ02083 359 aa8.22□□□□□ -1.09
HLA-DOA-201ENST00000229829 CRIP3Q6Q6R5 217 aa8.22□□□□□ -1.09
HLA-DOA-201ENST00000229829 ANKRD37Q7Z713 158 aa8.22□□□□□ -1.09
HLA-DOA-201ENST00000229829 PLXDC1Q8IUK5 500 aa8.22□□□□□ -1.09
HLA-DOA-201ENST00000229829 UEVLDQ8IX04 471 aa8.22□□□□□ -1.09
HLA-DOA-201ENST00000229829 SLC25A45Q8N413 288 aa8.22□□□□□ -1.09
HLA-DOA-201ENST00000229829 COMMD1Q8N668 190 aa8.22□□□□□ -1.09
HLA-DOA-201ENST00000229829 SLC35G3Q8N808 338 aa8.22□□□□□ -1.09
HLA-DOA-201ENST00000229829 TMEM37Q8WXS4 190 aa8.22□□□□□ -1.09
HLA-DOA-201ENST00000229829 TOMM40LQ969M1 308 aa8.22□□□□□ -1.09
HLA-DOA-201ENST00000229829 REEP6Q96HR9 211 aa8.22□□□□□ -1.09
HLA-DOA-201ENST00000229829 SNHG12Q9BXW3 62 aa8.22□□□□□ -1.09
HLA-DOA-201ENST00000229829 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.22□□□□□ -1.09
HLA-DOA-201ENST00000229829 ZNF701Q9NV72 531 aaPredicted RBP8.22□□□□□ -1.09
HLA-DOA-201ENST00000229829 ALKBH4Q9NXW9 302 aa8.22□□□□□ -1.09
HLA-DOA-201ENST00000229829 SRPK3Q9UPE1 567 aa8.22□□□□□ -1.09
HLA-DOA-201ENST00000229829 FLVCR1Q9Y5Y0 555 aa8.22□□□□□ -1.09
HLA-DOA-201ENST00000229829 LOC102724200A0A096LPH7 203 aaPredicted RBP8.22□□□□□ -1.09
HLA-DOA-201ENST00000229829 BORCS7-ASMTA0A0B4J1R7 106 aa8.22□□□□□ -1.09
HLA-DOA-201ENST00000229829 CBY3A6NI87 242 aa8.22□□□□□ -1.09
HLA-DOA-201ENST00000229829 ZNF724A8MTY0 619 aa8.22□□□□□ -1.09
HLA-DOA-201ENST00000229829 PIAS2O75928 621 aa8.22□□□□□ -1.09
HLA-DOA-201ENST00000229829 NXPH3O95157 252 aa8.22□□□□□ -1.09
HLA-DOA-201ENST00000229829 SFT2D2O95562 160 aa8.22□□□□□ -1.09
HLA-DOA-201ENST00000229829 CSTBP04080 98 aaKnown RBP8.22□□□□□ -1.09
HLA-DOA-201ENST00000229829 CHRM2P08172 466 aa8.22□□□□□ -1.09
HLA-DOA-201ENST00000229829 TFPI2P48307 235 aa8.22□□□□□ -1.09
HLA-DOA-201ENST00000229829 CX3CR1P49238 355 aa8.22□□□□□ -1.09
HLA-DOA-201ENST00000229829 GABREP78334 506 aa8.22□□□□□ -1.09
HLA-DOA-201ENST00000229829 SP6Q3SY56 376 aa8.22□□□□□ -1.09
HLA-DOA-201ENST00000229829 THEM4Q5T1C6 240 aa8.22□□□□□ -1.09
HLA-DOA-201ENST00000229829 SLC25A24Q6NUK1 477 aa8.22□□□□□ -1.09
HLA-DOA-201ENST00000229829 SUMF1Q8NBK3 374 aa8.22□□□□□ -1.09
HLA-DOA-201ENST00000229829 ERGIC1Q969X5 290 aa8.22□□□□□ -1.09
HLA-DOA-201ENST00000229829 ZNF775Q96BV0 537 aaPredicted RBP8.22□□□□□ -1.09
HLA-DOA-201ENST00000229829 OR5B2Q96R09 309 aa8.22□□□□□ -1.09
HLA-DOA-201ENST00000229829 CDC6Q99741 560 aa8.22□□□□□ -1.09
HLA-DOA-201ENST00000229829 HIST1H2BLQ99880 126 aa8.22□□□□□ -1.09
HLA-DOA-201ENST00000229829 NIPSNAP3BQ9BS92 247 aa8.22□□□□□ -1.09
HLA-DOA-201ENST00000229829 PNRC2Q9NPJ4 139 aaKnown RBP8.22□□□□□ -1.09
HLA-DOA-201ENST00000229829 HDGFL3Q9Y3E1 203 aa8.22□□□□□ -1.09
HLA-DOA-201ENST00000229829 B3GALT1Q9Y5Z6 326 aa8.22□□□□□ -1.09
HLA-DOA-201ENST00000229829 IGKV1D-8A0A087WSZ0 117 aa8.22□□□□□ -1.09
HLA-DOA-201ENST00000229829 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms