RNA–Protein interactions for RNA: ENST00000229328.9

PRKAB1-201, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKAB1, Length 2,610 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-201ENST00000229328 Q6ZT83 130 aa12.36□□□□□ -0.43
PRKAB1-201ENST00000229328 ZADH2Q8N4Q0 377 aa12.36□□□□□ -0.43
PRKAB1-201ENST00000229328 SARAFQ96BY9 339 aa12.36□□□□□ -0.43
PRKAB1-201ENST00000229328 ZNF488Q96MN9 340 aa12.36□□□□□ -0.43
PRKAB1-201ENST00000229328 C1QTNF6Q9BXI9 259 aa12.36□□□□□ -0.43
PRKAB1-201ENST00000229328 MFFQ9GZY8 342 aa12.36□□□□□ -0.43
PRKAB1-201ENST00000229328 OPA3Q9H6K4 179 aa12.36□□□□□ -0.43
PRKAB1-201ENST00000229328 ZNF442Q9H7R0 627 aa12.36□□□□□ -0.43
PRKAB1-201ENST00000229328 PCDHB16Q9NRJ7 776 aa12.36□□□□□ -0.43
PRKAB1-201ENST00000229328 UBQLN2Q9UHD9 624 aa12.36□□□□□ -0.43
PRKAB1-201ENST00000229328 C13orf42A0A1B0GVH6 325 aa12.35□□□□□ -0.43
PRKAB1-201ENST00000229328 ADAP1O75689 374 aa12.35□□□□□ -0.43
PRKAB1-201ENST00000229328 PDGFAP04085 211 aa12.35□□□□□ -0.43
PRKAB1-201ENST00000229328 PGAM2P15259 253 aa12.35□□□□□ -0.43
PRKAB1-201ENST00000229328 CTRB1P17538 263 aa12.35□□□□□ -0.43
PRKAB1-201ENST00000229328 CA6P23280 308 aa12.35□□□□□ -0.43
PRKAB1-201ENST00000229328 UBE2NP61088 152 aaKnown RBP12.35□□□□□ -0.43
PRKAB1-201ENST00000229328 ZNF169Q14929 603 aaPredicted RBP12.35□□□□□ -0.43
PRKAB1-201ENST00000229328 TBC1D28Q2M2D7 210 aa12.35□□□□□ -0.43
PRKAB1-201ENST00000229328 CTRB2Q6GPI1 263 aa12.35□□□□□ -0.43
PRKAB1-201ENST00000229328 HAGHLQ6PII5 290 aaPredicted RBP12.35□□□□□ -0.43
PRKAB1-201ENST00000229328 ZNF546Q86UE3 836 aa12.35□□□□□ -0.43
PRKAB1-201ENST00000229328 SCGB3A2Q96PL1 93 aa12.35□□□□□ -0.43
PRKAB1-201ENST00000229328 HIST1H2AAQ96QV6 131 aa12.35□□□□□ -0.43
PRKAB1-201ENST00000229328 RDH8Q9NYR8 311 aa12.35□□□□□ -0.43
PRKAB1-201ENST00000229328 DCHS1Q96JQ0 3298 aa12.35□□□□□ -0.43
PRKAB1-201ENST00000229328 ANKRD30BLA7E2S9 258 aa12.35□□□□□ -0.43
PRKAB1-201ENST00000229328 MPTX1A8MV57 137 aa12.35□□□□□ -0.43
PRKAB1-201ENST00000229328 K7EM74 188 aa12.35□□□□□ -0.43
PRKAB1-201ENST00000229328 RPA2P15927 270 aa12.35□□□□□ -0.43
PRKAB1-201ENST00000229328 DUSP1P28562 367 aa12.35□□□□□ -0.43
PRKAB1-201ENST00000229328 PTGER4P35408 488 aa12.35□□□□□ -0.43
PRKAB1-201ENST00000229328 TGFBR3Q03167 851 aa12.35□□□□□ -0.43
PRKAB1-201ENST00000229328 ACSF3Q4G176 576 aaPredicted RBP12.35□□□□□ -0.43
PRKAB1-201ENST00000229328 C11orf87Q6NUJ2 197 aa12.35□□□□□ -0.43
PRKAB1-201ENST00000229328 SLC22A25Q6T423 547 aa12.35□□□□□ -0.43
PRKAB1-201ENST00000229328 C3P1Q6ZMU1 363 aa12.35□□□□□ -0.43
PRKAB1-201ENST00000229328 C5orf24Q7Z6I8 188 aa12.35□□□□□ -0.43
PRKAB1-201ENST00000229328 DKK4Q9UBT3 224 aa12.35□□□□□ -0.43
PRKAB1-201ENST00000229328 MAB21L2Q9Y586 359 aa12.35□□□□□ -0.43
PRKAB1-201ENST00000229328 C5orf51A6NDU8 294 aa12.34□□□□□ -0.43
PRKAB1-201ENST00000229328 SMPD2O60906 423 aa12.34□□□□□ -0.43
PRKAB1-201ENST00000229328 C4BPBP20851 252 aa12.34□□□□□ -0.43
PRKAB1-201ENST00000229328 FGF12P61328 243 aa12.34□□□□□ -0.43
PRKAB1-201ENST00000229328 ATXN7L3Q14CW9 347 aaPredicted RBP12.34□□□□□ -0.43
PRKAB1-201ENST00000229328 ELP2Q6IA86 826 aa12.34□□□□□ -0.43
PRKAB1-201ENST00000229328 ZNF585AQ6P3V2 769 aa12.34□□□□□ -0.43
PRKAB1-201ENST00000229328 ASCL5Q7RTU5 278 aa12.34□□□□□ -0.43
PRKAB1-201ENST00000229328 TMEM200AQ86VY9 491 aa12.34□□□□□ -0.43
PRKAB1-201ENST00000229328 SAXO1Q8IYX7 474 aa12.34□□□□□ -0.43
PRKAB1-201ENST00000229328 OR5L1Q8NGL2 311 aa12.34□□□□□ -0.43
PRKAB1-201ENST00000229328 OR2J1Q9GZK6 312 aa12.34□□□□□ -0.43
PRKAB1-201ENST00000229328 NECAP2Q9NVZ3 263 aa12.34□□□□□ -0.43
PRKAB1-201ENST00000229328 KLK10O43240 276 aa12.34□□□□□ -0.43
PRKAB1-201ENST00000229328 AGFG2O95081 481 aa12.34□□□□□ -0.43
PRKAB1-201ENST00000229328 WNT2BQ93097 391 aa12.34□□□□□ -0.43
PRKAB1-201ENST00000229328 COMMD9Q9P000 198 aa12.34□□□□□ -0.43
PRKAB1-201ENST00000229328 SVILO95425 2214 aa12.34□□□□□ -0.43
PRKAB1-201ENST00000229328 TRAPPC2LH3BP13 241 aa12.33□□□□□ -0.44
PRKAB1-201ENST00000229328 KCNAB3O43448 404 aa12.33□□□□□ -0.44
PRKAB1-201ENST00000229328 FGL1Q08830 312 aa12.33□□□□□ -0.44
PRKAB1-201ENST00000229328 IKZF1Q13422 519 aa12.33□□□□□ -0.44
PRKAB1-201ENST00000229328 SURF2Q15527 256 aaPredicted RBP12.33□□□□□ -0.44
PRKAB1-201ENST00000229328 ALKBH6Q3KRA9 238 aa12.33□□□□□ -0.44
PRKAB1-201ENST00000229328 EXTL1Q92935 676 aa12.33□□□□□ -0.44
PRKAB1-201ENST00000229328 C14orf166Q9Y224 244 aaKnown RBP12.33□□□□□ -0.44
PRKAB1-201ENST00000229328 MPC1Q9Y5U8 109 aa12.33□□□□□ -0.44
PRKAB1-201ENST00000229328 LEUTXA8MZ59 168 aa12.33□□□□□ -0.44
PRKAB1-201ENST00000229328 HSPB6O14558 160 aa12.33□□□□□ -0.44
PRKAB1-201ENST00000229328 RP2O75695 350 aa12.33□□□□□ -0.44
PRKAB1-201ENST00000229328 SNAPC5O75971 98 aa12.33□□□□□ -0.44
PRKAB1-201ENST00000229328 NSUN5P2Q63ZY6 315 aa12.33□□□□□ -0.44
PRKAB1-201ENST00000229328 TMEM65Q6PI78 240 aa12.33□□□□□ -0.44
PRKAB1-201ENST00000229328 DHRS11Q6UWP2 260 aa12.33□□□□□ -0.44
PRKAB1-201ENST00000229328 MKXQ8IYA7 352 aa12.33□□□□□ -0.44
PRKAB1-201ENST00000229328 TOMM40LQ969M1 308 aa12.33□□□□□ -0.44
PRKAB1-201ENST00000229328 WDR13Q9H1Z4 485 aa12.33□□□□□ -0.44
PRKAB1-201ENST00000229328 NARFLQ9H6Q4 476 aa12.33□□□□□ -0.44
PRKAB1-201ENST00000229328 DECR2Q9NUI1 292 aa12.33□□□□□ -0.44
PRKAB1-201ENST00000229328 TNFSF18Q9UNG2 199 aa12.33□□□□□ -0.44
PRKAB1-201ENST00000229328 RHBDL1O75783 438 aa12.32□□□□□ -0.44
PRKAB1-201ENST00000229328 SLC25A4P12235 298 aa12.32□□□□□ -0.44
PRKAB1-201ENST00000229328 CALCRP30988 508 aa12.32□□□□□ -0.44
PRKAB1-201ENST00000229328 PPP1CBP62140 327 aa12.32□□□□□ -0.44
PRKAB1-201ENST00000229328 BEX5Q5H9J7 111 aa12.32□□□□□ -0.44
PRKAB1-201ENST00000229328 NHLRC3Q5JS37 347 aa12.32□□□□□ -0.44
PRKAB1-201ENST00000229328 TMEM211Q6ICI0 200 aa12.32□□□□□ -0.44
PRKAB1-201ENST00000229328 IGFL3Q6UXB1 125 aa12.32□□□□□ -0.44
PRKAB1-201ENST00000229328 GSG1LQ6UXU4 331 aa12.32□□□□□ -0.44
PRKAB1-201ENST00000229328 FBXW12Q6X9E4 464 aa12.32□□□□□ -0.44
PRKAB1-201ENST00000229328 SEM1Q6ZVN7 128 aa12.32□□□□□ -0.44
PRKAB1-201ENST00000229328 C17orf78Q8N4C9 275 aa12.32□□□□□ -0.44
PRKAB1-201ENST00000229328 WDR31Q8NA23 367 aa12.32□□□□□ -0.44
PRKAB1-201ENST00000229328 AIFM2Q9BRQ8 373 aa12.32□□□□□ -0.44
PRKAB1-201ENST00000229328 CDH20Q9HBT6 801 aa12.32□□□□□ -0.44
PRKAB1-201ENST00000229328 ZNF286AQ9HBT8 521 aa12.32□□□□□ -0.44
PRKAB1-201ENST00000229328 LUZP4Q9P127 313 aa12.32□□□□□ -0.44
PRKAB1-201ENST00000229328 ESPL1Q14674 2120 aa12.32□□□□□ -0.44
PRKAB1-201ENST00000229328 PRR14LQ5THK1 2151 aa12.32□□□□□ -0.44
PRKAB1-201ENST00000229328 LINC00862A6NCI5 91 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms