RNA–Protein interactions for RNA: ENST00000219084.10

CHD9-201, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 8,739 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-201ENST00000219084 PCOLCE2Q9UKZ9 415 aa3.93□□□□□ -1.78
CHD9-201ENST00000219084 ENSAO43768 121 aaKnown RBP3.93□□□□□ -1.78
CHD9-201ENST00000219084 OR10J1P30954 320 aa3.93□□□□□ -1.78
CHD9-201ENST00000219084 PTGER1P34995 402 aa3.93□□□□□ -1.78
CHD9-201ENST00000219084 GABRA6Q16445 453 aa3.93□□□□□ -1.78
CHD9-201ENST00000219084 ZNF528Q3MIS6 628 aa3.93□□□□□ -1.78
CHD9-201ENST00000219084 FAM209AQ5JX71 171 aa3.93□□□□□ -1.78
CHD9-201ENST00000219084 NKAIN2Q5VXU1 208 aa3.93□□□□□ -1.78
CHD9-201ENST00000219084 ZNF66Q6ZN08 573 aa3.93□□□□□ -1.78
CHD9-201ENST00000219084 SHISA6Q6ZSJ9 500 aa3.93□□□□□ -1.78
CHD9-201ENST00000219084 FA2HQ7L5A8 372 aa3.93□□□□□ -1.78
CHD9-201ENST00000219084 LILRA3Q8N6C8 439 aaPredicted RBP3.93□□□□□ -1.78
CHD9-201ENST00000219084 OR4A4PQ8NGN8 299 aa3.93□□□□□ -1.78
CHD9-201ENST00000219084 OR1L1Q8NH94 360 aa3.93□□□□□ -1.78
CHD9-201ENST00000219084 ASB5Q8WWX0 329 aa3.93□□□□□ -1.78
CHD9-201ENST00000219084 ARHGAP5-AS1Q96IT6 56 aa3.93□□□□□ -1.78
CHD9-201ENST00000219084 WDR54Q9H977 334 aa3.93□□□□□ -1.78
CHD9-201ENST00000219084 MYOZ1Q9NP98 299 aaPredicted RBP3.93□□□□□ -1.78
CHD9-201ENST00000219084 TMEM38BQ9NVV0 291 aa3.93□□□□□ -1.78
CHD9-201ENST00000219084 THYN1Q9P016 225 aa3.93□□□□□ -1.78
CHD9-201ENST00000219084 ANXA10Q9UJ72 324 aa3.93□□□□□ -1.78
CHD9-201ENST00000219084 CDC42EP3Q9UKI2 254 aa3.93□□□□□ -1.78
CHD9-201ENST00000219084 KIAA1671Q9BY89 1806 aa3.93□□□□□ -1.78
CHD9-201ENST00000219084 CDK2AP1O14519 115 aa3.93□□□□□ -1.78
CHD9-201ENST00000219084 GZMMP51124 257 aa3.93□□□□□ -1.78
CHD9-201ENST00000219084 EDDM3BP56851 147 aa3.93□□□□□ -1.78
CHD9-201ENST00000219084 LIAT1Q6ZQX7 453 aa3.93□□□□□ -1.78
CHD9-201ENST00000219084 SLC25A26Q70HW3 274 aa3.93□□□□□ -1.78
CHD9-201ENST00000219084 SPEM1Q8N4L4 309 aa3.93□□□□□ -1.78
CHD9-201ENST00000219084 OR52B4Q8NGK2 314 aa3.93□□□□□ -1.78
CHD9-201ENST00000219084 COPS9Q8WXC6 57 aa3.93□□□□□ -1.78
CHD9-201ENST00000219084 ZG16BQ96DA0 208 aa3.93□□□□□ -1.78
CHD9-201ENST00000219084 THOC3Q96J01 351 aaKnown RBP3.93□□□□□ -1.78
CHD9-201ENST00000219084 PLSCR3Q9NRY6 295 aa3.93□□□□□ -1.78
CHD9-201ENST00000219084 ICAM5Q9UMF0 924 aa3.93□□□□□ -1.78
CHD9-201ENST00000219084 MPTX1A8MV57 137 aa3.93□□□□□ -1.78
CHD9-201ENST00000219084 PRRT4C9JH25 899 aa3.93□□□□□ -1.78
CHD9-201ENST00000219084 WDR1O75083 606 aa3.93□□□□□ -1.78
CHD9-201ENST00000219084 ST6GAL1P15907 406 aa3.93□□□□□ -1.78
CHD9-201ENST00000219084 COTL1Q14019 142 aa3.93□□□□□ -1.78
CHD9-201ENST00000219084 SLC36A1Q7Z2H8 476 aa3.93□□□□□ -1.78
CHD9-201ENST00000219084 FAM216AQ8WUB2 273 aa3.93□□□□□ -1.78
CHD9-201ENST00000219084 ORAI1Q96D31 301 aa3.93□□□□□ -1.78
CHD9-201ENST00000219084 MS4A10Q96PG2 267 aa3.93□□□□□ -1.78
CHD9-201ENST00000219084 PLXNA4Q9HCM2 1894 aa3.93□□□□□ -1.78
CHD9-201ENST00000219084 TNFSF18Q9UNG2 199 aa3.93□□□□□ -1.78
CHD9-201ENST00000219084 YY2O15391 372 aa3.92□□□□□ -1.78
CHD9-201ENST00000219084 LANCL1O43813 399 aa3.92□□□□□ -1.78
CHD9-201ENST00000219084 HSBP1O75506 76 aa3.92□□□□□ -1.78
CHD9-201ENST00000219084 ERGP11308 486 aa3.92□□□□□ -1.78
CHD9-201ENST00000219084 CDC34P49427 236 aaPredicted RBP3.92□□□□□ -1.78
CHD9-201ENST00000219084 PPIAP62937 165 aaKnown RBP3.92□□□□□ -1.78
CHD9-201ENST00000219084 VAMP3Q15836 100 aa3.92□□□□□ -1.78
CHD9-201ENST00000219084 STUMQ69YW2 141 aa3.92□□□□□ -1.78
CHD9-201ENST00000219084 CD200R1LQ6Q8B3 271 aa3.92□□□□□ -1.78
CHD9-201ENST00000219084 LCN15Q6UWW0 184 aa3.92□□□□□ -1.78
CHD9-201ENST00000219084 ZNF793Q6ZN11 406 aa3.92□□□□□ -1.78
CHD9-201ENST00000219084 DOLPP1Q86YN1 238 aa3.92□□□□□ -1.78
CHD9-201ENST00000219084 WBP2Q969T9 261 aa3.92□□□□□ -1.78
CHD9-201ENST00000219084 VSTM2LQ96N03 204 aa3.92□□□□□ -1.78
CHD9-201ENST00000219084 PHF7Q9BWX1 381 aaPredicted RBP3.92□□□□□ -1.78
CHD9-201ENST00000219084 PECRQ9BY49 303 aa3.92□□□□□ -1.78
CHD9-201ENST00000219084 TMEM9BQ9NQ34 198 aa3.92□□□□□ -1.78
CHD9-201ENST00000219084 TECRQ9NZ01 308 aaKnown RBP3.92□□□□□ -1.78
CHD9-201ENST00000219084 CLCF1Q9UBD9 225 aa3.92□□□□□ -1.78
CHD9-201ENST00000219084 LOC101059915A0A1B0GWI6 518 aaPredicted RBP3.92□□□□□ -1.78
CHD9-201ENST00000219084 FAM90A26D6RGX4 464 aa3.92□□□□□ -1.78
CHD9-201ENST00000219084 PHOX2AO14813 284 aa3.92□□□□□ -1.78
CHD9-201ENST00000219084 KCNAB3O43448 404 aa3.92□□□□□ -1.78
CHD9-201ENST00000219084 CRYAAP02489 173 aa3.92□□□□□ -1.78
CHD9-201ENST00000219084 FABP4P15090 132 aa3.92□□□□□ -1.78
CHD9-201ENST00000219084 SRD5A2P31213 254 aa3.92□□□□□ -1.78
CHD9-201ENST00000219084 MMP16P51512 607 aa3.92□□□□□ -1.78
CHD9-201ENST00000219084 ZP4Q12836 540 aa3.92□□□□□ -1.78
CHD9-201ENST00000219084 PABPC1L2AQ5JQF8 200 aa3.92□□□□□ -1.78
CHD9-201ENST00000219084 ATG4DQ86TL0 474 aaPredicted RBP3.92□□□□□ -1.78
CHD9-201ENST00000219084 RTN4RL1Q86UN2 441 aaPredicted RBP3.92□□□□□ -1.78
CHD9-201ENST00000219084 OR4F17Q8NGA8 305 aa3.92□□□□□ -1.78
CHD9-201ENST00000219084 OR13G1Q8NGZ3 307 aa3.92□□□□□ -1.78
CHD9-201ENST00000219084 OR2T6Q8NHC8 308 aa3.92□□□□□ -1.78
CHD9-201ENST00000219084 TMEM30AQ9NV96 361 aa3.92□□□□□ -1.78
CHD9-201ENST00000219084 CACNA1GO43497 2377 aa3.92□□□□□ -1.78
CHD9-201ENST00000219084 IGSF23A1L1A6 192 aa3.92□□□□□ -1.78
CHD9-201ENST00000219084 GPR37O15354 613 aa3.92□□□□□ -1.78
CHD9-201ENST00000219084 ADAM20O43506 726 aa3.92□□□□□ -1.78
CHD9-201ENST00000219084 TNFSF12O43508 249 aa3.92□□□□□ -1.78
CHD9-201ENST00000219084 COMPP49747 757 aaPredicted RBP3.92□□□□□ -1.78
CHD9-201ENST00000219084 BTLAQ7Z6A9 289 aa3.92□□□□□ -1.78
CHD9-201ENST00000219084 UBE3DQ7Z6J8 389 aa3.92□□□□□ -1.78
CHD9-201ENST00000219084 OR10V1Q8NGI7 309 aa3.92□□□□□ -1.78
CHD9-201ENST00000219084 GABRG3Q99928 467 aa3.92□□□□□ -1.78
CHD9-201ENST00000219084 GHITMQ9H3K2 345 aa3.92□□□□□ -1.78
CHD9-201ENST00000219084 ZNF106Q9H2Y7 1883 aaKnown RBP3.92□□□□□ -1.78
CHD9-201ENST00000219084 TRAV20A0A0B4J274 112 aa3.92□□□□□ -1.78
CHD9-201ENST00000219084 MFSD2BA6NFX1 497 aa3.92□□□□□ -1.78
CHD9-201ENST00000219084 RPLP1P05386 114 aaKnown RBP3.92□□□□□ -1.78
CHD9-201ENST00000219084 F2RP25116 425 aa3.92□□□□□ -1.78
CHD9-201ENST00000219084 TGFBR1P36897 503 aa3.92□□□□□ -1.78
CHD9-201ENST00000219084 TMEM33P57088 247 aa3.92□□□□□ -1.78
CHD9-201ENST00000219084 RAC3P60763 192 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms