RNA–Protein interactions for RNA: ENST00000005226.11

USH1C-201, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USH1C, Length 2,700 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-201ENST00000005226 EIF1P41567 113 aaKnown RBP12.17□□□□□ -0.46
USH1C-201ENST00000005226 HMGN3Q15651 99 aa12.17□□□□□ -0.46
USH1C-201ENST00000005226 ZMAT5Q9UDW3 170 aaKnown RBP12.17□□□□□ -0.46
USH1C-201ENST00000005226 MTCH2Q9Y6C9 303 aa12.17□□□□□ -0.46
USH1C-201ENST00000005226 H7C1Q1 480 aa12.17□□□□□ -0.46
USH1C-201ENST00000005226 ST8SIA3O43173 380 aa12.17□□□□□ -0.46
USH1C-201ENST00000005226 AADACP22760 399 aa12.17□□□□□ -0.46
USH1C-201ENST00000005226 PAX6P26367 422 aa12.17□□□□□ -0.46
USH1C-201ENST00000005226 CHATP28329 748 aa12.17□□□□□ -0.46
USH1C-201ENST00000005226 NTF4P34130 210 aa12.17□□□□□ -0.46
USH1C-201ENST00000005226 UCP2P55851 309 aa12.17□□□□□ -0.46
USH1C-201ENST00000005226 RPS23P62266 143 aaKnown RBP12.17□□□□□ -0.46
USH1C-201ENST00000005226 HAGHQ16775 308 aa12.17□□□□□ -0.46
USH1C-201ENST00000005226 ZNF343Q6P1L6 599 aa12.17□□□□□ -0.46
USH1C-201ENST00000005226 ULBP2Q9BZM5 246 aa12.17□□□□□ -0.46
USH1C-201ENST00000005226 METTL1Q9UBP6 276 aaKnown RBP12.17□□□□□ -0.46
USH1C-201ENST00000005226 HDGFL3Q9Y3E1 203 aa12.17□□□□□ -0.46
USH1C-201ENST00000005226 CHCHD2Q9Y6H1 151 aaPredicted RBP12.17□□□□□ -0.46
USH1C-201ENST00000005226 IGLV3-32A0A0A0MS00 114 aa12.17□□□□□ -0.46
USH1C-201ENST00000005226 OR2C1O95371 312 aa12.17□□□□□ -0.46
USH1C-201ENST00000005226 SPINK2P20155 84 aa12.17□□□□□ -0.46
USH1C-201ENST00000005226 RPS10P46783 165 aaKnown RBP12.17□□□□□ -0.46
USH1C-201ENST00000005226 ZNF133P52736 654 aaPredicted RBP12.17□□□□□ -0.46
USH1C-201ENST00000005226 SHBQ15464 509 aa12.17□□□□□ -0.46
USH1C-201ENST00000005226 TAAR9Q96RI9 348 aa12.17□□□□□ -0.46
USH1C-201ENST00000005226 SEMA5BQ9P283 1151 aa12.17□□□□□ -0.46
USH1C-201ENST00000005226 URGCP-MRPS24S4R325 110 aa12.17□□□□□ -0.46
USH1C-201ENST00000005226 TNFSF11O14788 317 aa12.16□□□□□ -0.46
USH1C-201ENST00000005226 DUSP1P28562 367 aa12.16□□□□□ -0.46
USH1C-201ENST00000005226 H3F3AP84243 136 aa12.16□□□□□ -0.46
USH1C-201ENST00000005226 EWSR1Q01844 656 aaKnown RBP eCLIP12.16□□□□□ -0.46
USH1C-201ENST00000005226 SOHLH1Q5JUK2 328 aa12.16□□□□□ -0.46
USH1C-201ENST00000005226 RABEPKQ7Z6M1 372 aa12.16□□□□□ -0.46
USH1C-201ENST00000005226 ZIC4Q8N9L1 334 aa12.16□□□□□ -0.46
USH1C-201ENST00000005226 OR2G3Q8NGZ4 309 aa12.16□□□□□ -0.46
USH1C-201ENST00000005226 TMEM54Q969K7 222 aa12.16□□□□□ -0.46
USH1C-201ENST00000005226 FSCN3Q9NQT6 498 aa12.16□□□□□ -0.46
USH1C-201ENST00000005226 ST3GAL6Q9Y274 331 aa12.16□□□□□ -0.46
USH1C-201ENST00000005226 IGSF23A1L1A6 192 aa12.16□□□□□ -0.46
USH1C-201ENST00000005226 CCL3P10147 92 aa12.16□□□□□ -0.46
USH1C-201ENST00000005226 ECI1P42126 302 aa12.16□□□□□ -0.46
USH1C-201ENST00000005226 PPA1Q15181 289 aa12.16□□□□□ -0.46
USH1C-201ENST00000005226 ZNF468Q5VIY5 522 aaPredicted RBP12.16□□□□□ -0.46
USH1C-201ENST00000005226 CDPF1Q6NVV7 123 aa12.16□□□□□ -0.46
USH1C-201ENST00000005226 GUSBP11Q6P575 273 aa12.16□□□□□ -0.46
USH1C-201ENST00000005226 FADS6Q8N9I5 356 aa12.16□□□□□ -0.46
USH1C-201ENST00000005226 NTNG2Q96CW9 530 aa12.16□□□□□ -0.46
USH1C-201ENST00000005226 BORCS8Q96FH0 119 aa12.16□□□□□ -0.46
USH1C-201ENST00000005226 AP4M1O00189 453 aa12.15□□□□□ -0.46
USH1C-201ENST00000005226 CA11O75493 328 aa12.15□□□□□ -0.46
USH1C-201ENST00000005226 CST7O76096 145 aa12.15□□□□□ -0.46
USH1C-201ENST00000005226 ATP6V0CP27449 155 aa12.15□□□□□ -0.46
USH1C-201ENST00000005226 OTX1P32242 354 aaPredicted RBP12.15□□□□□ -0.46
USH1C-201ENST00000005226 ARL6IP1Q15041 203 aa12.15□□□□□ -0.46
USH1C-201ENST00000005226 CXorf66Q5JRM2 361 aaPredicted RBP12.15□□□□□ -0.46
USH1C-201ENST00000005226 WDR74Q6RFH5 385 aaPredicted RBP12.15□□□□□ -0.46
USH1C-201ENST00000005226 TMEM123Q8N131 208 aa12.15□□□□□ -0.46
USH1C-201ENST00000005226 LGI3Q8N145 548 aa12.15□□□□□ -0.46
USH1C-201ENST00000005226 TMEM217Q8N7C4 229 aa12.15□□□□□ -0.46
USH1C-201ENST00000005226 SUMF2Q8NBJ7 301 aa12.15□□□□□ -0.46
USH1C-201ENST00000005226 OR1J1Q8NGS3 322 aa12.15□□□□□ -0.46
USH1C-201ENST00000005226 MR1Q95460 341 aa12.15□□□□□ -0.46
USH1C-201ENST00000005226 SPTSSAQ969W0 71 aa12.15□□□□□ -0.46
USH1C-201ENST00000005226 GALNT14Q96FL9 552 aa12.15□□□□□ -0.46
USH1C-201ENST00000005226 ZNF700Q9H0M5 742 aa12.15□□□□□ -0.46
USH1C-201ENST00000005226 A0A0J9YW62 118 aa12.15□□□□□ -0.47
USH1C-201ENST00000005226 ZNF724A8MTY0 619 aa12.15□□□□□ -0.47
USH1C-201ENST00000005226 H0YL77 283 aa12.15□□□□□ -0.47
USH1C-201ENST00000005226 K7N7A8 449 aa12.15□□□□□ -0.47
USH1C-201ENST00000005226 EIF2S3P41091 472 aaKnown RBP12.15□□□□□ -0.47
USH1C-201ENST00000005226 RUNX1Q01196 453 aa12.15□□□□□ -0.47
USH1C-201ENST00000005226 C10orf128Q5T292 105 aa12.15□□□□□ -0.47
USH1C-201ENST00000005226 GPR157Q5UAW9 335 aa12.15□□□□□ -0.47
USH1C-201ENST00000005226 FGFBP3Q8TAT2 258 aa12.15□□□□□ -0.47
USH1C-201ENST00000005226 SRXN1Q9BYN0 137 aa12.15□□□□□ -0.47
USH1C-201ENST00000005226 TUBA4BQ9H853 241 aa12.15□□□□□ -0.47
USH1C-201ENST00000005226 C3orf80F5H4A9 247 aa12.14□□□□□ -0.47
USH1C-201ENST00000005226 DKK1O94907 266 aa12.14□□□□□ -0.47
USH1C-201ENST00000005226 JMJD7P0C870 316 aa12.14□□□□□ -0.47
USH1C-201ENST00000005226 B4GALT1P15291 398 aa12.14□□□□□ -0.47
USH1C-201ENST00000005226 TMEM171Q8WVE6 324 aa12.14□□□□□ -0.47
USH1C-201ENST00000005226 TCTEX1D2Q8WW35 142 aa12.14□□□□□ -0.47
USH1C-201ENST00000005226 PIGCQ92535 297 aa12.14□□□□□ -0.47
USH1C-201ENST00000005226 OR51M1Q9H341 326 aa12.14□□□□□ -0.47
USH1C-201ENST00000005226 HSF4Q9ULV5 492 aa12.14□□□□□ -0.47
USH1C-201ENST00000005226 A0A1W2PQM1 296 aa12.14□□□□□ -0.47
USH1C-201ENST00000005226 PPIHO43447 177 aaKnown RBP12.14□□□□□ -0.47
USH1C-201ENST00000005226 SSSCA1O60232 199 aa12.14□□□□□ -0.47
USH1C-201ENST00000005226 EPHA1P21709 976 aa12.14□□□□□ -0.47
USH1C-201ENST00000005226 LMO1P25800 156 aa12.14□□□□□ -0.47
USH1C-201ENST00000005226 NPBWR2P48146 333 aa12.14□□□□□ -0.47
USH1C-201ENST00000005226 RBP2P50120 134 aa12.14□□□□□ -0.47
USH1C-201ENST00000005226 NDUFA6P56556 154 aa12.14□□□□□ -0.47
USH1C-201ENST00000005226 HIST1H3AP68431 136 aa12.14□□□□□ -0.47
USH1C-201ENST00000005226 CCL7P80098 99 aa12.14□□□□□ -0.47
USH1C-201ENST00000005226 SPIN3Q5JUX0 258 aa12.14□□□□□ -0.47
USH1C-201ENST00000005226 HIST2H3PS2Q5TEC6 136 aa12.14□□□□□ -0.47
USH1C-201ENST00000005226 RTL6Q6ICC9 239 aa12.14□□□□□ -0.47
USH1C-201ENST00000005226 HIST2H3AQ71DI3 136 aa12.14□□□□□ -0.47
USH1C-201ENST00000005226 P4HA3Q7Z4N8 544 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms