RNA–Protein interactions for RNA: ENSMUST00000022220.12

Msh3-201, Transcript of DNA mismatch repair protein Msh3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Msh3, Length 3,937 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3-201ENSMUST00000022220 A930004D18RikQ8C8W7 157 aa9.72□□□□□ -0.85
Msh3-201ENSMUST00000022220 Arl6ip5Q8R5J9 188 aa9.72□□□□□ -0.85
Msh3-201ENSMUST00000022220 Olfr639Q8VGY8 316 aa9.72□□□□□ -0.85
Msh3-201ENSMUST00000022220 Alkbh4Q9D8F1 300 aa9.72□□□□□ -0.85
Msh3-201ENSMUST00000022220 Q9DAE7 121 aa9.72□□□□□ -0.85
Msh3-201ENSMUST00000022220 Ak3Q9WTP7 227 aa9.72□□□□□ -0.85
Msh3-201ENSMUST00000022220 Wdr81Q5ND34 1934 aa9.72□□□□□ -0.85
Msh3-201ENSMUST00000022220 Usp36B1AQJ2 1098 aaKnown RBP9.72□□□□□ -0.85
Msh3-201ENSMUST00000022220 Gm11009F7CWA7 138 aa9.72□□□□□ -0.85
Msh3-201ENSMUST00000022220 Gm21761J3QK00 171 aa9.72□□□□□ -0.85
Msh3-201ENSMUST00000022220 Igh-1aP01865 398 aa9.72□□□□□ -0.85
Msh3-201ENSMUST00000022220 Selenbp1P17563 472 aa9.72□□□□□ -0.85
Msh3-201ENSMUST00000022220 Sdc1P18828 311 aa9.72□□□□□ -0.85
Msh3-201ENSMUST00000022220 Rab5cP35278 216 aa9.72□□□□□ -0.85
Msh3-201ENSMUST00000022220 Csnk2a1Q60737 391 aaKnown RBP9.72□□□□□ -0.85
Msh3-201ENSMUST00000022220 Calm5Q6W3E0 140 aa9.72□□□□□ -0.85
Msh3-201ENSMUST00000022220 Olfr205Q7TS37 305 aa9.72□□□□□ -0.85
Msh3-201ENSMUST00000022220 Muc20Q8BUE7 656 aa9.72□□□□□ -0.85
Msh3-201ENSMUST00000022220 Slc35e1Q8CD26 409 aa9.72□□□□□ -0.85
Msh3-201ENSMUST00000022220 PhyhipQ8K0S0 330 aa9.72□□□□□ -0.85
Msh3-201ENSMUST00000022220 Srpx2Q8R054 468 aa9.72□□□□□ -0.85
Msh3-201ENSMUST00000022220 Vmn1r17Q8R2D8 303 aa9.72□□□□□ -0.85
Msh3-201ENSMUST00000022220 Sectm1aQ921W8 192 aa9.72□□□□□ -0.85
Msh3-201ENSMUST00000022220 Glo1Q9CPU0 184 aa9.72□□□□□ -0.85
Msh3-201ENSMUST00000022220 Atg12Q9CQY1 141 aa9.72□□□□□ -0.85
Msh3-201ENSMUST00000022220 1700020A23RikQ9DA59 131 aa9.72□□□□□ -0.85
Msh3-201ENSMUST00000022220 Ascl3Q9JJR7 174 aa9.72□□□□□ -0.85
Msh3-201ENSMUST00000022220 Opn4Q9QXZ9 521 aa9.72□□□□□ -0.85
Msh3-201ENSMUST00000022220 Baz2aQ91YE5 1889 aaKnown RBP9.72□□□□□ -0.85
Msh3-201ENSMUST00000022220 Adamts9E9PUN6 1931 aa9.72□□□□□ -0.85
Msh3-201ENSMUST00000022220 Gm6880A3KG45 208 aa9.72□□□□□ -0.85
Msh3-201ENSMUST00000022220 Gm6576F6YTZ4 274 aa9.72□□□□□ -0.85
Msh3-201ENSMUST00000022220 Bloc1s1O55102 125 aa9.72□□□□□ -0.85
Msh3-201ENSMUST00000022220 Hprt1P00493 218 aa9.72□□□□□ -0.85
Msh3-201ENSMUST00000022220 P01654 111 aa9.72□□□□□ -0.85
Msh3-201ENSMUST00000022220 P01656 111 aa9.72□□□□□ -0.85
Msh3-201ENSMUST00000022220 P01808 119 aa9.72□□□□□ -0.85
Msh3-201ENSMUST00000022220 P03977 111 aa9.72□□□□□ -0.85
Msh3-201ENSMUST00000022220 Cox5bP19536 128 aa9.72□□□□□ -0.85
Msh3-201ENSMUST00000022220 Srp9P49962 86 aa9.72□□□□□ -0.85
Msh3-201ENSMUST00000022220 Ext1P97464 746 aa9.72□□□□□ -0.85
Msh3-201ENSMUST00000022220 Cass4Q08EC4 804 aa9.72□□□□□ -0.85
Msh3-201ENSMUST00000022220 Olfr1357Q7TQU7 313 aa9.72□□□□□ -0.85
Msh3-201ENSMUST00000022220 Kiaa1456Q80WQ4 447 aa9.72□□□□□ -0.85
Msh3-201ENSMUST00000022220 P4htmQ8BG58 503 aa9.72□□□□□ -0.85
Msh3-201ENSMUST00000022220 Tmem251Q8BH26 163 aa9.72□□□□□ -0.85
Msh3-201ENSMUST00000022220 Olfr578Q8VH17 313 aa9.72□□□□□ -0.85
Msh3-201ENSMUST00000022220 Tomm40lQ9CZR3 308 aa9.72□□□□□ -0.85
Msh3-201ENSMUST00000022220 Fam219aQ9D772 157 aa9.72□□□□□ -0.85
Msh3-201ENSMUST00000022220 Olfr568E9Q554 313 aa9.71□□□□□ -0.85
Msh3-201ENSMUST00000022220 Zfp760E9QAF5 666 aa9.71□□□□□ -0.85
Msh3-201ENSMUST00000022220 Vmn1r115K7N6Y3 295 aa9.71□□□□□ -0.85
Msh3-201ENSMUST00000022220 Vmn2r124K7N789 855 aa9.71□□□□□ -0.85
Msh3-201ENSMUST00000022220 Hoxb5P09079 269 aa9.71□□□□□ -0.85
Msh3-201ENSMUST00000022220 BlkP16277 499 aa9.71□□□□□ -0.85
Msh3-201ENSMUST00000022220 AregP31955 248 aa9.71□□□□□ -0.85
Msh3-201ENSMUST00000022220 Cnr1P47746 473 aa9.71□□□□□ -0.85
Msh3-201ENSMUST00000022220 GastP48757 101 aa9.71□□□□□ -0.85
Msh3-201ENSMUST00000022220 SelenohQ3UQA7 116 aa9.71□□□□□ -0.85
Msh3-201ENSMUST00000022220 Kat7Q5SVQ0 613 aaKnown RBP9.71□□□□□ -0.85
Msh3-201ENSMUST00000022220 Olfr259Q7TS20 312 aa9.71□□□□□ -0.85
Msh3-201ENSMUST00000022220 Stk35Q80ZW0 539 aa9.71□□□□□ -0.85
Msh3-201ENSMUST00000022220 Slc25a41Q8BVN7 312 aa9.71□□□□□ -0.85
Msh3-201ENSMUST00000022220 Ube3dQ8BX13 368 aa9.71□□□□□ -0.85
Msh3-201ENSMUST00000022220 Mmd2Q8R189 247 aa9.71□□□□□ -0.85
Msh3-201ENSMUST00000022220 Flvcr2Q91X85 551 aa9.71□□□□□ -0.85
Msh3-201ENSMUST00000022220 Olfr642Q924X8 314 aa9.71□□□□□ -0.85
Msh3-201ENSMUST00000022220 Tmem88Q9D0N8 159 aa9.71□□□□□ -0.85
Msh3-201ENSMUST00000022220 Rtl8bQ9D1F0 113 aa9.71□□□□□ -0.85
Msh3-201ENSMUST00000022220 Dmac2Q9D7K5 258 aaKnown RBP9.71□□□□□ -0.85
Msh3-201ENSMUST00000022220 Kcnj16Q9Z307 419 aa9.71□□□□□ -0.85
Msh3-201ENSMUST00000022220 Eml5Q8BQM8 1977 aa9.71□□□□□ -0.85
Msh3-201ENSMUST00000022220 Zfp407G3UVV3 2246 aa9.71□□□□□ -0.85
Msh3-201ENSMUST00000022220 MstnO08689 376 aa9.71□□□□□ -0.86
Msh3-201ENSMUST00000022220 Ndufb11O09111 151 aa9.71□□□□□ -0.86
Msh3-201ENSMUST00000022220 Glp1rO35659 463 aa9.71□□□□□ -0.86
Msh3-201ENSMUST00000022220 ArhgdigQ62160 225 aa9.71□□□□□ -0.86
Msh3-201ENSMUST00000022220 Olfr305Q7TS02 319 aa9.71□□□□□ -0.86
Msh3-201ENSMUST00000022220 Plcxd1Q8CHS4 345 aa9.71□□□□□ -0.86
Msh3-201ENSMUST00000022220 Acer2Q8VD53 275 aa9.71□□□□□ -0.86
Msh3-201ENSMUST00000022220 Olfr51Q8VGG9 307 aa9.71□□□□□ -0.86
Msh3-201ENSMUST00000022220 D730048I06RikQ9CQB8 106 aa9.71□□□□□ -0.86
Msh3-201ENSMUST00000022220 Mpped2Q9CZJ0 294 aa9.71□□□□□ -0.86
Msh3-201ENSMUST00000022220 Acot12Q9DBK0 556 aa9.71□□□□□ -0.86
Msh3-201ENSMUST00000022220 Wwtr1Q9EPK5 395 aa9.71□□□□□ -0.86
Msh3-201ENSMUST00000022220 Clec6aQ9JKF4 209 aa9.71□□□□□ -0.86
Msh3-201ENSMUST00000022220 Snrnp200Q6P4T2 2136 aaKnown RBP9.71□□□□□ -0.86
Msh3-201ENSMUST00000022220 Slc25a43A2A3V2 341 aa9.71□□□□□ -0.86
Msh3-201ENSMUST00000022220 AgmatA2AS89 358 aa9.71□□□□□ -0.86
Msh3-201ENSMUST00000022220 Gm20696H3BJN7 74 aa9.71□□□□□ -0.86
Msh3-201ENSMUST00000022220 Gfi1bO70237 330 aa9.71□□□□□ -0.86
Msh3-201ENSMUST00000022220 Mmp9P41245 730 aa9.71□□□□□ -0.86
Msh3-201ENSMUST00000022220 Tcl1aP56280 116 aa9.71□□□□□ -0.86
Msh3-201ENSMUST00000022220 Cyb5aP56395 134 aa9.71□□□□□ -0.86
Msh3-201ENSMUST00000022220 Il18P70380 192 aa9.71□□□□□ -0.86
Msh3-201ENSMUST00000022220 NppcQ61839 126 aa9.71□□□□□ -0.86
Msh3-201ENSMUST00000022220 Acp7Q8BX37 438 aa9.71□□□□□ -0.86
Msh3-201ENSMUST00000022220 Lsm10Q8QZX5 122 aa9.71□□□□□ -0.86
Msh3-201ENSMUST00000022220 Olfr446Q8VEV0 308 aa9.71□□□□□ -0.86
Msh3-201ENSMUST00000022220 Memo1Q91VH6 297 aa9.71□□□□□ -0.86
Retrieved 100 of 22,080 RNA–protein pairs in 33.7 ms