RNA–Protein interactions for RNA: ENST00000640872.1

PAX6-280, Transcript of paired box 6, humanhuman

TSL 1 (best)

Gene PAX6, Length 2,367 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-280ENST00000640872 D2HGDHQ8N465 521 aa11.93□□□□□ -0.5
PAX6-280ENST00000640872 MSI2Q96DH6 328 aaKnown RBP11.93□□□□□ -0.5
PAX6-280ENST00000640872 SDHAF3Q9NRP4 125 aa11.93□□□□□ -0.5
PAX6-280ENST00000640872 NECAP2Q9NVZ3 263 aa11.93□□□□□ -0.5
PAX6-280ENST00000640872 HSF4Q9ULV5 492 aa11.93□□□□□ -0.5
PAX6-280ENST00000640872 RCL1Q9Y2P8 373 aaKnown RBP11.93□□□□□ -0.5
PAX6-280ENST00000640872 A0A1B0GX78 115 aa11.93□□□□□ -0.5
PAX6-280ENST00000640872 A0A1W2PNR3 127 aa11.93□□□□□ -0.5
PAX6-280ENST00000640872 ST8SIA3O43173 380 aa11.93□□□□□ -0.5
PAX6-280ENST00000640872 ZNF205O95201 554 aa11.93□□□□□ -0.5
PAX6-280ENST00000640872 FOLR1P15328 257 aa11.93□□□□□ -0.5
PAX6-280ENST00000640872 RPS10P46783 165 aaKnown RBP11.93□□□□□ -0.5
PAX6-280ENST00000640872 ARL4DP49703 201 aa11.93□□□□□ -0.5
PAX6-280ENST00000640872 RRADP55042 308 aa11.93□□□□□ -0.5
PAX6-280ENST00000640872 ABCA11PQ4W5N1 156 aa11.93□□□□□ -0.5
PAX6-280ENST00000640872 FBXW12Q6X9E4 464 aa11.93□□□□□ -0.5
PAX6-280ENST00000640872 REEP6Q96HR9 211 aa11.93□□□□□ -0.5
PAX6-280ENST00000640872 OXGR1Q96P68 337 aa11.93□□□□□ -0.5
PAX6-280ENST00000640872 PIGQQ9BRB3 760 aa11.93□□□□□ -0.5
PAX6-280ENST00000640872 ZNF160Q9HCG1 818 aa11.93□□□□□ -0.5
PAX6-280ENST00000640872 AK3Q9UIJ7 227 aa11.93□□□□□ -0.5
PAX6-280ENST00000640872 CABIN1Q9Y6J0 2220 aa11.93□□□□□ -0.5
PAX6-280ENST00000640872 MYO7BQ6PIF6 2116 aa11.92□□□□□ -0.5
PAX6-280ENST00000640872 RD3LP0DJH9 198 aa11.92□□□□□ -0.5
PAX6-280ENST00000640872 CCL20P78556 96 aa11.92□□□□□ -0.5
PAX6-280ENST00000640872 DEFB133Q30KQ1 61 aa11.92□□□□□ -0.5
PAX6-280ENST00000640872 C9orf152Q5JTZ5 239 aa11.92□□□□□ -0.5
PAX6-280ENST00000640872 NFAM1Q8NET5 270 aaPredicted RBP11.92□□□□□ -0.5
PAX6-280ENST00000640872 SNIP1Q8TAD8 396 aaKnown RBP11.92□□□□□ -0.5
PAX6-280ENST00000640872 INTS12Q96CB8 462 aaKnown RBP11.92□□□□□ -0.5
PAX6-280ENST00000640872 MARS2Q96GW9 593 aaKnown RBP11.92□□□□□ -0.5
PAX6-280ENST00000640872 FAAP24Q9BTP7 215 aa11.92□□□□□ -0.5
PAX6-280ENST00000640872 CHRDQ9H2X0 955 aa11.92□□□□□ -0.5
PAX6-280ENST00000640872 SLC2A9Q9NRM0 540 aa11.92□□□□□ -0.5
PAX6-280ENST00000640872 KLRF1Q9NZS2 232 aa11.92□□□□□ -0.5
PAX6-280ENST00000640872 NXT1Q9UKK6 140 aaKnown RBP11.92□□□□□ -0.5
PAX6-280ENST00000640872 CA14Q9ULX7 337 aa11.92□□□□□ -0.5
PAX6-280ENST00000640872 PIGLQ9Y2B2 252 aa11.92□□□□□ -0.5
PAX6-280ENST00000640872 ZNF850A8MQ14 1090 aa11.92□□□□□ -0.5
PAX6-280ENST00000640872 GPR37O15354 613 aa11.92□□□□□ -0.5
PAX6-280ENST00000640872 KLK2P20151 261 aa11.92□□□□□ -0.5
PAX6-280ENST00000640872 DTYMKP23919 212 aa11.92□□□□□ -0.5
PAX6-280ENST00000640872 OPRM1P35372 400 aa11.92□□□□□ -0.5
PAX6-280ENST00000640872 PTGDSP41222 190 aa11.92□□□□□ -0.5
PAX6-280ENST00000640872 LSM6P62312 80 aaKnown RBP11.92□□□□□ -0.5
PAX6-280ENST00000640872 EWSR1Q01844 656 aaKnown RBP eCLIP11.92□□□□□ -0.5
PAX6-280ENST00000640872 SPSB3Q6PJ21 355 aa11.92□□□□□ -0.5
PAX6-280ENST00000640872 OR8G5Q8NG78 346 aa11.92□□□□□ -0.5
PAX6-280ENST00000640872 OR4D5Q8NGN0 318 aa11.92□□□□□ -0.5
PAX6-280ENST00000640872 BOD1Q96IK1 185 aa11.92□□□□□ -0.5
PAX6-280ENST00000640872 C11orf1Q9H5F2 150 aa11.92□□□□□ -0.5
PAX6-280ENST00000640872 ZNF581Q9P0T4 197 aa11.92□□□□□ -0.5
PAX6-280ENST00000640872 MMP24Q9Y5R2 645 aa11.92□□□□□ -0.5
PAX6-280ENST00000640872 NCOA6Q14686 2063 aaPredicted RBP11.91□□□□□ -0.5
PAX6-280ENST00000640872 CCDC187A0A096LP49 1063 aa11.91□□□□□ -0.5
PAX6-280ENST00000640872 IGLV3-32A0A0A0MS00 114 aa11.91□□□□□ -0.5
PAX6-280ENST00000640872 RBFOX3A6NFN3 312 aa11.91□□□□□ -0.5
PAX6-280ENST00000640872 F5H5K5 113 aa11.91□□□□□ -0.5
PAX6-280ENST00000640872 MSX1P28360 303 aa11.91□□□□□ -0.5
PAX6-280ENST00000640872 AFF3P51826 1226 aaKnown RBP11.91□□□□□ -0.5
PAX6-280ENST00000640872 CFHR1Q03591 330 aa11.91□□□□□ -0.5
PAX6-280ENST00000640872 RSPO1Q2MKA7 263 aaPredicted RBP11.91□□□□□ -0.5
PAX6-280ENST00000640872 PHLDA2Q53GA4 152 aa11.91□□□□□ -0.5
PAX6-280ENST00000640872 LGI3Q8N145 548 aa11.91□□□□□ -0.5
PAX6-280ENST00000640872 NTNG2Q96CW9 530 aa11.91□□□□□ -0.5
PAX6-280ENST00000640872 RAB39BQ96DA2 213 aa11.91□□□□□ -0.5
PAX6-280ENST00000640872 ANGPTL4Q9BY76 406 aa11.91□□□□□ -0.5
PAX6-280ENST00000640872 DOK5Q9P104 306 aa11.91□□□□□ -0.5
PAX6-280ENST00000640872 A0A087WWC5 75 aa11.91□□□□□ -0.5
PAX6-280ENST00000640872 ZNF726A6NNF4 738 aa11.91□□□□□ -0.5
PAX6-280ENST00000640872 H3BQ15 152 aa11.91□□□□□ -0.5
PAX6-280ENST00000640872 OR1D5P58170 312 aa11.91□□□□□ -0.5
PAX6-280ENST00000640872 FXYD4P59646 89 aa11.91□□□□□ -0.5
PAX6-280ENST00000640872 C14orf28Q4W4Y0 310 aa11.91□□□□□ -0.5
PAX6-280ENST00000640872 SP5Q6BEB4 398 aaPredicted RBP11.91□□□□□ -0.5
PAX6-280ENST00000640872 CDPF1Q6NVV7 123 aa11.91□□□□□ -0.5
PAX6-280ENST00000640872 OR5L1Q8NGL2 311 aa11.91□□□□□ -0.5
PAX6-280ENST00000640872 C10orf35Q96D05 121 aa11.91□□□□□ -0.5
PAX6-280ENST00000640872 PFDN5Q99471 154 aa11.91□□□□□ -0.5
PAX6-280ENST00000640872 OPA3Q9H6K4 179 aa11.91□□□□□ -0.5
PAX6-280ENST00000640872 RFNGQ9Y644 331 aa11.91□□□□□ -0.5
PAX6-280ENST00000640872 SPAG17Q6Q759 2223 aa11.9□□□□□ -0.5
PAX6-280ENST00000640872 IGHV1OR15-9A0A0B4J2B8 117 aa11.9□□□□□ -0.5
PAX6-280ENST00000640872 OR5H15A6NDH6 313 aa11.9□□□□□ -0.5
PAX6-280ENST00000640872 ZNF727A8MUV8 499 aa11.9□□□□□ -0.5
PAX6-280ENST00000640872 HSD17B6O14756 317 aa11.9□□□□□ -0.5
PAX6-280ENST00000640872 CXCL1P09341 107 aa11.9□□□□□ -0.5
PAX6-280ENST00000640872 GLI4P10075 376 aa11.9□□□□□ -0.5
PAX6-280ENST00000640872 MSR1P21757 451 aa11.9□□□□□ -0.5
PAX6-280ENST00000640872 ITGA3P26006 1051 aa11.9□□□□□ -0.5
PAX6-280ENST00000640872 OTX1P32242 354 aaPredicted RBP11.9□□□□□ -0.5
PAX6-280ENST00000640872 ASCL1P50553 236 aa11.9□□□□□ -0.5
PAX6-280ENST00000640872 NDUFA6P56556 154 aa11.9□□□□□ -0.5
PAX6-280ENST00000640872 ENDOGQ14249 297 aaKnown RBP11.9□□□□□ -0.5
PAX6-280ENST00000640872 ELOBQ15370 118 aa11.9□□□□□ -0.5
PAX6-280ENST00000640872 TAF9Q16594 264 aa11.9□□□□□ -0.5
PAX6-280ENST00000640872 Q8WTZ3 238 aa11.9□□□□□ -0.5
PAX6-280ENST00000640872 WDR77Q9BQA1 342 aaPredicted RBP11.9□□□□□ -0.5
PAX6-280ENST00000640872 ABHD14AQ9BUJ0 271 aa11.9□□□□□ -0.5
PAX6-280ENST00000640872 UNKLQ9H9P5 680 aaKnown RBP11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 105.2 ms