RNA–Protein interactions for RNA: ENST00000640289.1

GTF3A-209, Transcript of general transcription factor IIIA, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-209ENST00000640289 TMPRSS2O15393 492 aa10.99□□□□□ -0.65
GTF3A-209ENST00000640289 PHF1O43189 567 aaPredicted RBP10.99□□□□□ -0.65
GTF3A-209ENST00000640289 NDUFA2O43678 99 aa10.99□□□□□ -0.65
GTF3A-209ENST00000640289 TGFAP01135 160 aa10.99□□□□□ -0.65
GTF3A-209ENST00000640289 PRKACAP17612 351 aa10.99□□□□□ -0.65
GTF3A-209ENST00000640289 GADD45AP24522 165 aa10.99□□□□□ -0.65
GTF3A-209ENST00000640289 PTGFRP43088 359 aa10.99□□□□□ -0.65
GTF3A-209ENST00000640289 PITPNBP48739 271 aa10.99□□□□□ -0.65
GTF3A-209ENST00000640289 LCN2P80188 198 aa10.99□□□□□ -0.65
GTF3A-209ENST00000640289 IKZF1Q13422 519 aa10.99□□□□□ -0.65
GTF3A-209ENST00000640289 ATPAF1Q5TC12 328 aaPredicted RBP10.99□□□□□ -0.65
GTF3A-209ENST00000640289 ZNF788Q6ZQV5 615 aa10.99□□□□□ -0.65
GTF3A-209ENST00000640289 Q71RC1 249 aaPredicted RBP10.99□□□□□ -0.65
GTF3A-209ENST00000640289 Q8IYB0 196 aa10.99□□□□□ -0.65
GTF3A-209ENST00000640289 SAXO1Q8IYX7 474 aa10.99□□□□□ -0.65
GTF3A-209ENST00000640289 FAM58AQ8N1B3 248 aa10.99□□□□□ -0.65
GTF3A-209ENST00000640289 CD177Q8N6Q3 437 aa10.99□□□□□ -0.65
GTF3A-209ENST00000640289 NKAIN3Q8N8D7 197 aa10.99□□□□□ -0.65
GTF3A-209ENST00000640289 LINC01356Q8N9X3 169 aa10.99□□□□□ -0.65
GTF3A-209ENST00000640289 PNLDC1Q8NA58 520 aaKnown RBP10.99□□□□□ -0.65
GTF3A-209ENST00000640289 ZSCAN4Q8NAM6 433 aaPredicted RBP10.99□□□□□ -0.65
GTF3A-209ENST00000640289 PXT1Q8NFP0 134 aa10.99□□□□□ -0.65
GTF3A-209ENST00000640289 OR8B3Q8NGG8 313 aa10.99□□□□□ -0.65
GTF3A-209ENST00000640289 OR4D6Q8NGJ1 314 aa10.99□□□□□ -0.65
GTF3A-209ENST00000640289 YIPF6Q96EC8 236 aa10.99□□□□□ -0.65
GTF3A-209ENST00000640289 OR8B2Q96RD0 313 aa10.99□□□□□ -0.65
GTF3A-209ENST00000640289 CHCHD6Q9BRQ6 235 aa10.99□□□□□ -0.65
GTF3A-209ENST00000640289 MRPS26Q9BYN8 205 aaKnown RBP10.99□□□□□ -0.65
GTF3A-209ENST00000640289 SLITRK2Q9H156 845 aa10.99□□□□□ -0.65
GTF3A-209ENST00000640289 RNF167Q9H6Y7 350 aa10.99□□□□□ -0.65
GTF3A-209ENST00000640289 ELL3Q9HB65 397 aaPredicted RBP10.99□□□□□ -0.65
GTF3A-209ENST00000640289 TXNL4BQ9NX01 149 aaKnown RBP10.99□□□□□ -0.65
GTF3A-209ENST00000640289 KAAG1Q9UBP8 84 aa10.99□□□□□ -0.65
GTF3A-209ENST00000640289 ING4Q9UNL4 249 aa10.99□□□□□ -0.65
GTF3A-209ENST00000640289 AK6Q9Y3D8 172 aaKnown RBP10.99□□□□□ -0.65
GTF3A-209ENST00000640289 ITPR3Q14573 2671 aa10.98□□□□□ -0.65
GTF3A-209ENST00000640289 MEGF11A6BM72 1044 aa10.98□□□□□ -0.65
GTF3A-209ENST00000640289 KIAA1324LA8MWY0 1029 aaPredicted RBP10.98□□□□□ -0.65
GTF3A-209ENST00000640289 B4DSR2 109 aa10.98□□□□□ -0.65
GTF3A-209ENST00000640289 CD5LO43866 347 aa10.98□□□□□ -0.65
GTF3A-209ENST00000640289 GALP22466 123 aa10.98□□□□□ -0.65
GTF3A-209ENST00000640289 DUSP1P28562 367 aa10.98□□□□□ -0.65
GTF3A-209ENST00000640289 GNB2P62879 340 aa10.98□□□□□ -0.65
GTF3A-209ENST00000640289 RSU1Q15404 277 aa10.98□□□□□ -0.65
GTF3A-209ENST00000640289 DGUOKQ16854 277 aa10.98□□□□□ -0.65
GTF3A-209ENST00000640289 ESCO2Q56NI9 601 aa10.98□□□□□ -0.65
GTF3A-209ENST00000640289 WDR25Q64LD2 544 aaPredicted RBP10.98□□□□□ -0.65
GTF3A-209ENST00000640289 GLT8D1Q68CQ7 371 aa10.98□□□□□ -0.65
GTF3A-209ENST00000640289 GLIPR1L1Q6UWM5 242 aa10.98□□□□□ -0.65
GTF3A-209ENST00000640289 CLEC9AQ6UXN8 241 aa10.98□□□□□ -0.65
GTF3A-209ENST00000640289 ASCL4Q6XD76 172 aa10.98□□□□□ -0.65
GTF3A-209ENST00000640289 NLRC3Q7RTR2 1065 aa10.98□□□□□ -0.65
GTF3A-209ENST00000640289 BIVMQ86UB2 503 aa10.98□□□□□ -0.65
GTF3A-209ENST00000640289 ZNRF1Q8ND25 227 aa10.98□□□□□ -0.65
GTF3A-209ENST00000640289 SSBP3Q9BWW4 388 aaPredicted RBP10.98□□□□□ -0.65
GTF3A-209ENST00000640289 HMG20AQ9NP66 347 aa10.98□□□□□ -0.65
GTF3A-209ENST00000640289 CLN8Q9UBY8 286 aa10.98□□□□□ -0.65
GTF3A-209ENST00000640289 SSR3Q9UNL2 185 aa10.98□□□□□ -0.65
GTF3A-209ENST00000640289 GSTK1Q9Y2Q3 226 aa10.98□□□□□ -0.65
GTF3A-209ENST00000640289 MRPS28Q9Y2Q9 187 aaKnown RBP10.98□□□□□ -0.65
GTF3A-209ENST00000640289 MAB21L2Q9Y586 359 aa10.98□□□□□ -0.65
GTF3A-209ENST00000640289 LOC100506127A0A0U1RQW1 187 aa10.97□□□□□ -0.65
GTF3A-209ENST00000640289 A0A1W2PP11 408 aa10.97□□□□□ -0.65
GTF3A-209ENST00000640289 NKX6-3A6NJ46 265 aa10.97□□□□□ -0.65
GTF3A-209ENST00000640289 DVL1O14640 695 aa10.97□□□□□ -0.65
GTF3A-209ENST00000640289 SIGLEC5O15389 551 aa10.97□□□□□ -0.65
GTF3A-209ENST00000640289 HTR3BO95264 441 aa10.97□□□□□ -0.65
GTF3A-209ENST00000640289 KNG1P01042 644 aa10.97□□□□□ -0.65
GTF3A-209ENST00000640289 MSMBP08118 114 aa10.97□□□□□ -0.65
GTF3A-209ENST00000640289 SERPINA2P20848 420 aa10.97□□□□□ -0.65
GTF3A-209ENST00000640289 FGF9P31371 208 aaPredicted RBP10.97□□□□□ -0.65
GTF3A-209ENST00000640289 PRDX2P32119 198 aa10.97□□□□□ -0.65
GTF3A-209ENST00000640289 IL13RA1P78552 427 aa10.97□□□□□ -0.65
GTF3A-209ENST00000640289 PDCD1Q15116 288 aa10.97□□□□□ -0.65
GTF3A-209ENST00000640289 AWAT2Q6E213 333 aa10.97□□□□□ -0.65
GTF3A-209ENST00000640289 SLC36A1Q7Z2H8 476 aa10.97□□□□□ -0.65
GTF3A-209ENST00000640289 CDH26Q8IXH8 852 aa10.97□□□□□ -0.65
GTF3A-209ENST00000640289 OR13F1Q8NGS4 319 aa10.97□□□□□ -0.65
GTF3A-209ENST00000640289 ST8SIA4Q92187 359 aa10.97□□□□□ -0.65
GTF3A-209ENST00000640289 S100A13Q99584 98 aa10.97□□□□□ -0.65
GTF3A-209ENST00000640289 DNTTIP1Q9H147 329 aa10.97□□□□□ -0.65
GTF3A-209ENST00000640289 METTL9Q9H1A3 318 aa10.97□□□□□ -0.65
GTF3A-209ENST00000640289 MAST4O15021 2626 aa10.97□□□□□ -0.65
GTF3A-209ENST00000640289 TRAV1-2A0A0B4J238 106 aa10.96□□□□□ -0.65
GTF3A-209ENST00000640289 SMIM30A4D0T7 59 aa10.96□□□□□ -0.65
GTF3A-209ENST00000640289 A8MXK9 166 aa10.96□□□□□ -0.65
GTF3A-209ENST00000640289 FOXH1O75593 365 aa10.96□□□□□ -0.65
GTF3A-209ENST00000640289 HAND1O96004 215 aa10.96□□□□□ -0.65
GTF3A-209ENST00000640289 TFAP2AP05549 437 aa10.96□□□□□ -0.65
GTF3A-209ENST00000640289 CD37P11049 281 aa10.96□□□□□ -0.65
GTF3A-209ENST00000640289 MYL9P24844 172 aa10.96□□□□□ -0.65
GTF3A-209ENST00000640289 TGFBR1P36897 503 aa10.96□□□□□ -0.65
GTF3A-209ENST00000640289 MTNR1BP49286 362 aa10.96□□□□□ -0.65
GTF3A-209ENST00000640289 OR10A3P58181 314 aa10.96□□□□□ -0.65
GTF3A-209ENST00000640289 COL10A1Q03692 680 aa10.96□□□□□ -0.65
GTF3A-209ENST00000640289 SLC22A6Q4U2R8 563 aa10.96□□□□□ -0.65
GTF3A-209ENST00000640289 C1orf100Q5SVJ3 147 aa10.96□□□□□ -0.65
GTF3A-209ENST00000640289 ELP2Q6IA86 826 aa10.96□□□□□ -0.65
GTF3A-209ENST00000640289 TMEM185AQ8NFB2 350 aa10.96□□□□□ -0.65
GTF3A-209ENST00000640289 FOXRED1Q96CU9 486 aaPredicted RBP10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms