RNA–Protein interactions for RNA: ENST00000639244.1

SCN3A-209, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5 BASIC

Gene SCN3A, Length 8,854 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-209ENST00000639244 KIR2DS5Q14953 304 aa3.82□□□□□ -1.8
SCN3A-209ENST00000639244 ELAVL1Q15717 326 aaKnown RBP3.82□□□□□ -1.8
SCN3A-209ENST00000639244 LRRC75BQ2VPJ9 315 aa3.82□□□□□ -1.8
SCN3A-209ENST00000639244 OPN5Q6U736 354 aa3.82□□□□□ -1.8
SCN3A-209ENST00000639244 TMEM192Q8IY95 271 aa3.82□□□□□ -1.8
SCN3A-209ENST00000639244 GALNT16Q8N428 558 aa3.82□□□□□ -1.8
SCN3A-209ENST00000639244 OR8S1Q8NH09 359 aa3.82□□□□□ -1.8
SCN3A-209ENST00000639244 C8orf44Q96CB5 159 aa3.82□□□□□ -1.8
SCN3A-209ENST00000639244 SNRNP40Q96DI7 357 aaKnown RBP3.82□□□□□ -1.8
SCN3A-209ENST00000639244 COA1Q9GZY4 146 aa3.82□□□□□ -1.8
SCN3A-209ENST00000639244 TMEM9BQ9NQ34 198 aa3.82□□□□□ -1.8
SCN3A-209ENST00000639244 ABCA4P78363 2273 aa3.82□□□□□ -1.8
SCN3A-209ENST00000639244 USP6P35125 1406 aa3.82□□□□□ -1.8
SCN3A-209ENST00000639244 PEAK1Q9H792 1746 aa3.82□□□□□ -1.8
SCN3A-209ENST00000639244 J3KR12 359 aa3.82□□□□□ -1.8
SCN3A-209ENST00000639244 P04436 131 aa3.82□□□□□ -1.8
SCN3A-209ENST00000639244 RPL22P35268 128 aaKnown RBP3.82□□□□□ -1.8
SCN3A-209ENST00000639244 PLXDC2Q6UX71 529 aa3.82□□□□□ -1.8
SCN3A-209ENST00000639244 MEPCEQ7L2J0 689 aaKnown RBP3.82□□□□□ -1.8
SCN3A-209ENST00000639244 BMPERQ8N8U9 685 aa3.82□□□□□ -1.8
SCN3A-209ENST00000639244 CNIH3Q8TBE1 160 aa3.82□□□□□ -1.8
SCN3A-209ENST00000639244 SLC35B3Q9H1N7 401 aa3.82□□□□□ -1.8
SCN3A-209ENST00000639244 BARX1Q9HBU1 254 aaPredicted RBP3.82□□□□□ -1.8
SCN3A-209ENST00000639244 MEPEQ9NQ76 525 aaPredicted RBP3.82□□□□□ -1.8
SCN3A-209ENST00000639244 PIPOXQ9P0Z9 390 aa3.82□□□□□ -1.8
SCN3A-209ENST00000639244 CNOT1A5YKK6 2376 aaKnown RBP3.82□□□□□ -1.8
SCN3A-209ENST00000639244 A0A0B4J2A0 478 aa3.81□□□□□ -1.8
SCN3A-209ENST00000639244 VPREB1P12018 145 aa3.81□□□□□ -1.8
SCN3A-209ENST00000639244 ISL1P61371 349 aa3.81□□□□□ -1.8
SCN3A-209ENST00000639244 SRPXP78539 464 aa3.81□□□□□ -1.8
SCN3A-209ENST00000639244 ZNF474Q6S9Z5 364 aaPredicted RBP3.81□□□□□ -1.8
SCN3A-209ENST00000639244 CBLN3Q6UW01 205 aa3.81□□□□□ -1.8
SCN3A-209ENST00000639244 SP8Q8IXZ3 490 aa3.81□□□□□ -1.8
SCN3A-209ENST00000639244 STPG4Q8N801 248 aa3.81□□□□□ -1.8
SCN3A-209ENST00000639244 OR10C1Q96KK4 312 aa3.81□□□□□ -1.8
SCN3A-209ENST00000639244 ELL3Q9HB65 397 aaPredicted RBP3.81□□□□□ -1.8
SCN3A-209ENST00000639244 SHPKQ9UHJ6 478 aa3.81□□□□□ -1.8
SCN3A-209ENST00000639244 MMP17Q9ULZ9 603 aa3.81□□□□□ -1.8
SCN3A-209ENST00000639244 OSGIN2Q9Y236 505 aa3.81□□□□□ -1.8
SCN3A-209ENST00000639244 NPIPB5A8MRT5 1133 aa3.81□□□□□ -1.8
SCN3A-209ENST00000639244 FURINP09958 794 aa3.81□□□□□ -1.8
SCN3A-209ENST00000639244 CDK2P24941 298 aa3.81□□□□□ -1.8
SCN3A-209ENST00000639244 MANFP55145 182 aaKnown RBP3.81□□□□□ -1.8
SCN3A-209ENST00000639244 PIGFQ07326 219 aa3.81□□□□□ -1.8
SCN3A-209ENST00000639244 SRSF7Q16629 238 aaKnown RBP eCLIP3.81□□□□□ -1.8
SCN3A-209ENST00000639244 FAM159AQ6UWV7 190 aa3.81□□□□□ -1.8
SCN3A-209ENST00000639244 Q6ZTK2 550 aa3.81□□□□□ -1.8
SCN3A-209ENST00000639244 C16orf82Q7Z2V1 217 aa3.81□□□□□ -1.8
SCN3A-209ENST00000639244 ADGRE4PQ86SQ3 457 aa3.81□□□□□ -1.8
SCN3A-209ENST00000639244 PPTC7Q8NI37 304 aa3.81□□□□□ -1.8
SCN3A-209ENST00000639244 NPFFR1Q9GZQ6 430 aa3.81□□□□□ -1.8
SCN3A-209ENST00000639244 KCNE5Q9UJ90 142 aa3.81□□□□□ -1.8
SCN3A-209ENST00000639244 FZD1Q9UP38 647 aa3.81□□□□□ -1.8
SCN3A-209ENST00000639244 NFAT5O94916 1531 aa3.81□□□□□ -1.8
SCN3A-209ENST00000639244 NAV3Q8IVL0 2385 aa3.81□□□□□ -1.8
SCN3A-209ENST00000639244 C4AP0C0L4 1744 aa3.81□□□□□ -1.8
SCN3A-209ENST00000639244 C4BP0C0L5 1744 aa3.81□□□□□ -1.8
SCN3A-209ENST00000639244 A0A087WWC5 75 aa3.81□□□□□ -1.8
SCN3A-209ENST00000639244 CPSF4O95639 269 aaKnown RBP3.81□□□□□ -1.8
SCN3A-209ENST00000639244 HRH1P35367 487 aa3.81□□□□□ -1.8
SCN3A-209ENST00000639244 RGRP47804 291 aa3.81□□□□□ -1.8
SCN3A-209ENST00000639244 ZNF140P52738 457 aaPredicted RBP3.81□□□□□ -1.8
SCN3A-209ENST00000639244 WNT3P56703 355 aa3.81□□□□□ -1.8
SCN3A-209ENST00000639244 ADAM8P78325 824 aa3.81□□□□□ -1.8
SCN3A-209ENST00000639244 AGERQ15109 404 aa3.81□□□□□ -1.8
SCN3A-209ENST00000639244 TTC32Q5I0X7 151 aa3.81□□□□□ -1.8
SCN3A-209ENST00000639244 STUMQ69YW2 141 aa3.81□□□□□ -1.8
SCN3A-209ENST00000639244 IL17RELQ6ZVW7 336 aa3.81□□□□□ -1.8
SCN3A-209ENST00000639244 C20orf196Q8IYI0 205 aa3.81□□□□□ -1.8
SCN3A-209ENST00000639244 CAPNS2Q96L46 248 aa3.81□□□□□ -1.8
SCN3A-209ENST00000639244 ATP5SQ99766 215 aa3.81□□□□□ -1.8
SCN3A-209ENST00000639244 CLEC1BQ9P126 229 aa3.81□□□□□ -1.8
SCN3A-209ENST00000639244 CDC42BPGQ6DT37 1551 aa3.81□□□□□ -1.8
SCN3A-209ENST00000639244 PYCARD-AS1I3L0S3 204 aa3.81□□□□□ -1.8
SCN3A-209ENST00000639244 HPXP02790 462 aa3.81□□□□□ -1.8
SCN3A-209ENST00000639244 PPIBP23284 216 aaKnown RBP3.81□□□□□ -1.8
SCN3A-209ENST00000639244 FAM3BP58499 235 aaPredicted RBP3.81□□□□□ -1.8
SCN3A-209ENST00000639244 SLC10A2Q12908 348 aaPredicted RBP3.81□□□□□ -1.8
SCN3A-209ENST00000639244 PLCH1Q4KWH8 1693 aa3.81□□□□□ -1.8
SCN3A-209ENST00000639244 NEXMIFQ5QGS0 1516 aa3.81□□□□□ -1.8
SCN3A-209ENST00000639244 GFI1BQ5VTD9 330 aa3.81□□□□□ -1.8
SCN3A-209ENST00000639244 TMEM151AQ8N4L1 468 aa3.81□□□□□ -1.8
SCN3A-209ENST00000639244 C20orf173Q96LM9 149 aa3.81□□□□□ -1.8
SCN3A-209ENST00000639244 PNMA5Q96PV4 448 aa3.81□□□□□ -1.8
SCN3A-209ENST00000639244 CDX2Q99626 313 aaPredicted RBP3.81□□□□□ -1.8
SCN3A-209ENST00000639244 EIF5A2Q9GZV4 153 aaKnown RBP3.81□□□□□ -1.8
SCN3A-209ENST00000639244 TULP4Q9NRJ4 1543 aa3.81□□□□□ -1.8
SCN3A-209ENST00000639244 COQ4Q9Y3A0 265 aa3.81□□□□□ -1.8
SCN3A-209ENST00000639244 WNK1Q9H4A3 2382 aa3.81□□□□□ -1.8
SCN3A-209ENST00000639244 MED13LQ71F56 2210 aa3.81□□□□□ -1.8
SCN3A-209ENST00000639244 C3orf70A6NLC5 250 aaPredicted RBP3.81□□□□□ -1.8
SCN3A-209ENST00000639244 DSCR3O14972 297 aa3.81□□□□□ -1.8
SCN3A-209ENST00000639244 CD1DP15813 335 aa3.81□□□□□ -1.8
SCN3A-209ENST00000639244 TAS2R31P59538 309 aa3.81□□□□□ -1.8
SCN3A-209ENST00000639244 GSG1Q2KHT4 349 aa3.81□□□□□ -1.8
SCN3A-209ENST00000639244 TBC1D28Q2M2D7 210 aa3.81□□□□□ -1.8
SCN3A-209ENST00000639244 GLDNQ6ZMI3 551 aaPredicted RBP3.81□□□□□ -1.8
SCN3A-209ENST00000639244 LRP11Q86VZ4 500 aa3.81□□□□□ -1.8
SCN3A-209ENST00000639244 MUC20Q8N307 709 aaPredicted RBP3.81□□□□□ -1.8
SCN3A-209ENST00000639244 SNED1Q8TER0 1413 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms