RNA–Protein interactions for RNA: ENST00000638725.1

SNIP1-204, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 2

Gene SNIP1, Length 2,761 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-204ENST00000638725 OR1J1Q8NGS3 322 aa9.51□□□□□ -0.89
SNIP1-204ENST00000638725 OR11L1Q8NGX0 322 aa9.51□□□□□ -0.89
SNIP1-204ENST00000638725 OR2AE1Q8NHA4 323 aa9.51□□□□□ -0.89
SNIP1-204ENST00000638725 NABP1Q96AH0 204 aa9.51□□□□□ -0.89
SNIP1-204ENST00000638725 GALNT14Q96FL9 552 aa9.51□□□□□ -0.89
SNIP1-204ENST00000638725 ZNF385AQ96PM9 386 aaKnown RBP9.51□□□□□ -0.89
SNIP1-204ENST00000638725 TCEAL7Q9BRU2 100 aa9.51□□□□□ -0.89
SNIP1-204ENST00000638725 SLC35B3Q9H1N7 401 aa9.51□□□□□ -0.89
SNIP1-204ENST00000638725 OR51M1Q9H341 326 aa9.51□□□□□ -0.89
SNIP1-204ENST00000638725 LMAN1LQ9HAT1 526 aa9.51□□□□□ -0.89
SNIP1-204ENST00000638725 PLEK2Q9NYT0 353 aa9.51□□□□□ -0.89
SNIP1-204ENST00000638725 RCL1Q9Y2P8 373 aaKnown RBP9.51□□□□□ -0.89
SNIP1-204ENST00000638725 B3GALT1Q9Y5Z6 326 aa9.51□□□□□ -0.89
SNIP1-204ENST00000638725 ABCA7Q8IZY2 2146 aa9.5□□□□□ -0.89
SNIP1-204ENST00000638725 IGLV3-12A0A075B6K2 115 aa9.5□□□□□ -0.89
SNIP1-204ENST00000638725 TRBV23-1A0A0A0MS06 115 aa9.5□□□□□ -0.89
SNIP1-204ENST00000638725 NSG1A0A0A6YYJ2 146 aa9.5□□□□□ -0.89
SNIP1-204ENST00000638725 H7C1Q1 480 aa9.5□□□□□ -0.89
SNIP1-204ENST00000638725 PNLIPP16233 465 aa9.5□□□□□ -0.89
SNIP1-204ENST00000638725 LMO1P25800 156 aa9.5□□□□□ -0.89
SNIP1-204ENST00000638725 RHEBQ15382 184 aa9.5□□□□□ -0.89
SNIP1-204ENST00000638725 NKAIN1Q4KMZ8 207 aa9.5□□□□□ -0.89
SNIP1-204ENST00000638725 ACER2Q5QJU3 275 aa9.5□□□□□ -0.89
SNIP1-204ENST00000638725 LIAT1Q6ZQX7 453 aa9.5□□□□□ -0.89
SNIP1-204ENST00000638725 WDSUB1Q8N9V3 476 aa9.5□□□□□ -0.89
SNIP1-204ENST00000638725 C18orf12Q96KH6 178 aa9.5□□□□□ -0.89
SNIP1-204ENST00000638725 RARRES2Q99969 163 aa9.5□□□□□ -0.89
SNIP1-204ENST00000638725 RBM24Q9BX46 236 aaKnown RBP9.5□□□□□ -0.89
SNIP1-204ENST00000638725 METTL9Q9H1A3 318 aa9.5□□□□□ -0.89
SNIP1-204ENST00000638725 SLC2A9Q9NRM0 540 aa9.5□□□□□ -0.89
SNIP1-204ENST00000638725 SEMA5BQ9P283 1151 aa9.5□□□□□ -0.89
SNIP1-204ENST00000638725 PUS1Q9Y606 427 aaKnown RBP eCLIP9.5□□□□□ -0.89
SNIP1-204ENST00000638725 ADAMTS20P59510 1910 aa9.5□□□□□ -0.89
SNIP1-204ENST00000638725 IGKV1-27A0A075B6S5 117 aa9.5□□□□□ -0.89
SNIP1-204ENST00000638725 AP4M1O00189 453 aa9.5□□□□□ -0.89
SNIP1-204ENST00000638725 EIF2S3P41091 472 aaKnown RBP9.5□□□□□ -0.89
SNIP1-204ENST00000638725 RSU1Q15404 277 aa9.5□□□□□ -0.89
SNIP1-204ENST00000638725 GPR157Q5UAW9 335 aa9.5□□□□□ -0.89
SNIP1-204ENST00000638725 SLC22A25Q6T423 547 aa9.5□□□□□ -0.89
SNIP1-204ENST00000638725 OR5L2Q8NGL0 311 aa9.5□□□□□ -0.89
SNIP1-204ENST00000638725 EDARADDQ8WWZ3 215 aa9.5□□□□□ -0.89
SNIP1-204ENST00000638725 MSI2Q96DH6 328 aaKnown RBP9.5□□□□□ -0.89
SNIP1-204ENST00000638725 PBDC1Q9BVG4 233 aa9.5□□□□□ -0.89
SNIP1-204ENST00000638725 HDGFL3Q9Y3E1 203 aa9.5□□□□□ -0.89
SNIP1-204ENST00000638725 STRAPQ9Y3F4 350 aaKnown RBP9.5□□□□□ -0.89
SNIP1-204ENST00000638725 K7N7A8 449 aa9.49□□□□□ -0.89
SNIP1-204ENST00000638725 GPR37O15354 613 aa9.49□□□□□ -0.89
SNIP1-204ENST00000638725 ST8SIA3O43173 380 aa9.49□□□□□ -0.89
SNIP1-204ENST00000638725 DUSP1P28562 367 aa9.49□□□□□ -0.89
SNIP1-204ENST00000638725 OTX1P32242 354 aaPredicted RBP9.49□□□□□ -0.89
SNIP1-204ENST00000638725 RPS23P62266 143 aaKnown RBP9.49□□□□□ -0.89
SNIP1-204ENST00000638725 IL13RA2Q14627 380 aa9.49□□□□□ -0.89
SNIP1-204ENST00000638725 LINC00469Q8N7U9 141 aa9.49□□□□□ -0.89
SNIP1-204ENST00000638725 AKR7LQ8NHP1 331 aa9.49□□□□□ -0.89
SNIP1-204ENST00000638725 TCTEX1D2Q8WW35 142 aa9.49□□□□□ -0.89
SNIP1-204ENST00000638725 SGK3Q96BR1 496 aa9.49□□□□□ -0.89
SNIP1-204ENST00000638725 MALSU1Q96EH3 234 aa9.49□□□□□ -0.89
SNIP1-204ENST00000638725 SUCNR1Q9BXA5 334 aa9.49□□□□□ -0.89
SNIP1-204ENST00000638725 PHF1O43189 567 aaPredicted RBP9.49□□□□□ -0.89
SNIP1-204ENST00000638725 ZFAND5O76080 213 aa9.49□□□□□ -0.89
SNIP1-204ENST00000638725 GLB1P16278 677 aa9.49□□□□□ -0.89
SNIP1-204ENST00000638725 ITGA3P26006 1051 aa9.49□□□□□ -0.89
SNIP1-204ENST00000638725 CHATP28329 748 aa9.49□□□□□ -0.89
SNIP1-204ENST00000638725 RAB5CP51148 216 aa9.49□□□□□ -0.89
SNIP1-204ENST00000638725 CCL20P78556 96 aa9.49□□□□□ -0.89
SNIP1-204ENST00000638725 CLINT1Q14677 625 aa9.49□□□□□ -0.89
SNIP1-204ENST00000638725 PDCD1Q15116 288 aa9.49□□□□□ -0.89
SNIP1-204ENST00000638725 PIGYQ3MUY2 71 aa9.49□□□□□ -0.89
SNIP1-204ENST00000638725 MEX3BQ6ZN04 569 aaKnown RBP9.49□□□□□ -0.89
SNIP1-204ENST00000638725 Q6ZSR3 168 aa9.49□□□□□ -0.89
SNIP1-204ENST00000638725 CPEB2Q7Z5Q1 589 aaKnown RBP9.49□□□□□ -0.89
SNIP1-204ENST00000638725 ZNF837Q96EG3 531 aaPredicted RBP9.49□□□□□ -0.89
SNIP1-204ENST00000638725 UCN2Q96RP3 112 aa9.49□□□□□ -0.89
SNIP1-204ENST00000638725 RASL10BQ96S79 203 aa9.49□□□□□ -0.89
SNIP1-204ENST00000638725 ABHD14AQ9BUJ0 271 aa9.49□□□□□ -0.89
SNIP1-204ENST00000638725 TINAGQ9UJW2 476 aa9.49□□□□□ -0.89
SNIP1-204ENST00000638725 EML6Q6ZMW3 1958 aa9.49□□□□□ -0.89
SNIP1-204ENST00000638725 PRUNE2Q8WUY3 3088 aa9.49□□□□□ -0.89
SNIP1-204ENST00000638725 GEMIN2O14893 280 aaKnown RBP9.48□□□□□ -0.89
SNIP1-204ENST00000638725 PPIHO43447 177 aaKnown RBP9.48□□□□□ -0.89
SNIP1-204ENST00000638725 CD63P08962 238 aa9.48□□□□□ -0.89
SNIP1-204ENST00000638725 DTYMKP23919 212 aa9.48□□□□□ -0.89
SNIP1-204ENST00000638725 EWSR1Q01844 656 aaKnown RBP eCLIP9.48□□□□□ -0.89
SNIP1-204ENST00000638725 C10orf128Q5T292 105 aa9.48□□□□□ -0.89
SNIP1-204ENST00000638725 KMT5CQ86Y97 462 aa9.48□□□□□ -0.89
SNIP1-204ENST00000638725 LGI3Q8N145 548 aa9.48□□□□□ -0.89
SNIP1-204ENST00000638725 LRTM2Q8N967 370 aa9.48□□□□□ -0.89
SNIP1-204ENST00000638725 SUMF2Q8NBJ7 301 aa9.48□□□□□ -0.89
SNIP1-204ENST00000638725 SMRP1Q8NCR6 262 aa9.48□□□□□ -0.89
SNIP1-204ENST00000638725 MTCH2Q9Y6C9 303 aa9.48□□□□□ -0.89
SNIP1-204ENST00000638725 LOC102725191A0A1B0GVB3 256 aa9.48□□□□□ -0.89
SNIP1-204ENST00000638725 FAM24AA6NFZ4 105 aa9.48□□□□□ -0.89
SNIP1-204ENST00000638725 CDRT15L2A8MXV6 281 aa9.48□□□□□ -0.89
SNIP1-204ENST00000638725 DHHO43323 396 aa9.48□□□□□ -0.89
SNIP1-204ENST00000638725 OR2C1O95371 312 aa9.48□□□□□ -0.89
SNIP1-204ENST00000638725 IGHV2-70P01814 119 aa9.48□□□□□ -0.89
SNIP1-204ENST00000638725 S100PP25815 95 aa9.48□□□□□ -0.89
SNIP1-204ENST00000638725 HIST1H3AP68431 136 aa9.48□□□□□ -0.89
SNIP1-204ENST00000638725 SHBQ15464 509 aa9.48□□□□□ -0.89
SNIP1-204ENST00000638725 SOHLH1Q5JUK2 328 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms