RNA–Protein interactions for RNA: ENST00000637881.1

CDKL5-211, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 5

Gene CDKL5, Length 1,782 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-211ENST00000637881 FOXQ1Q9C009 403 aa6.94□□□□□ -1.3
CDKL5-211ENST00000637881 SLC35D1Q9NTN3 355 aa6.94□□□□□ -1.3
CDKL5-211ENST00000637881 C1orf123Q9NWV4 160 aa6.94□□□□□ -1.3
CDKL5-211ENST00000637881 CISD1Q9NZ45 108 aaKnown RBP6.94□□□□□ -1.3
CDKL5-211ENST00000637881 LAMP3Q9UQV4 416 aa6.94□□□□□ -1.3
CDKL5-211ENST00000637881 FCF1Q9Y324 198 aaKnown RBP6.94□□□□□ -1.3
CDKL5-211ENST00000637881 SCN2AQ99250 2005 aa6.94□□□□□ -1.3
CDKL5-211ENST00000637881 BDP1A6H8Y1 2624 aa6.94□□□□□ -1.3
CDKL5-211ENST00000637881 TRAV8-7A0A075B6U6 113 aa6.93□□□□□ -1.3
CDKL5-211ENST00000637881 MEGF11A6BM72 1044 aa6.93□□□□□ -1.3
CDKL5-211ENST00000637881 ZNF814B7Z6K7 855 aa6.93□□□□□ -1.3
CDKL5-211ENST00000637881 C22orf46C9J442 243 aa6.93□□□□□ -1.3
CDKL5-211ENST00000637881 ABHD16AO95870 558 aa6.93□□□□□ -1.3
CDKL5-211ENST00000637881 HRASP01112 189 aa6.93□□□□□ -1.3
CDKL5-211ENST00000637881 MAS1P04201 325 aa6.93□□□□□ -1.3
CDKL5-211ENST00000637881 THY1P04216 161 aa6.93□□□□□ -1.3
CDKL5-211ENST00000637881 ZNF43P17038 809 aa6.93□□□□□ -1.3
CDKL5-211ENST00000637881 FSTP19883 344 aa6.93□□□□□ -1.3
CDKL5-211ENST00000637881 MC5RP33032 325 aa6.93□□□□□ -1.3
CDKL5-211ENST00000637881 ECI1P42126 302 aa6.93□□□□□ -1.3
CDKL5-211ENST00000637881 MTCP1P56278 107 aa6.93□□□□□ -1.3
CDKL5-211ENST00000637881 ZFP36L1Q07352 338 aaKnown RBP6.93□□□□□ -1.3
CDKL5-211ENST00000637881 ZNF266Q14584 549 aa6.93□□□□□ -1.3
CDKL5-211ENST00000637881 IL13RA2Q14627 380 aa6.93□□□□□ -1.3
CDKL5-211ENST00000637881 ZNF260Q3ZCT1 412 aa6.93□□□□□ -1.3
CDKL5-211ENST00000637881 SAMD13Q5VXD3 122 aa6.93□□□□□ -1.3
CDKL5-211ENST00000637881 BATF2Q8N1L9 274 aa6.93□□□□□ -1.3
CDKL5-211ENST00000637881 TMEM156Q8N614 296 aa6.93□□□□□ -1.3
CDKL5-211ENST00000637881 OR51G1Q8NGK1 321 aa6.93□□□□□ -1.3
CDKL5-211ENST00000637881 OR10S1Q8NGN2 331 aa6.93□□□□□ -1.3
CDKL5-211ENST00000637881 ZNF519Q8TB69 540 aa6.93□□□□□ -1.3
CDKL5-211ENST00000637881 MARCH1Q8TCQ1 289 aa6.93□□□□□ -1.3
CDKL5-211ENST00000637881 GLYATL1Q969I3 302 aa6.93□□□□□ -1.3
CDKL5-211ENST00000637881 APH1AQ96BI3 265 aa6.93□□□□□ -1.3
CDKL5-211ENST00000637881 ZMYND19Q96E35 227 aaPredicted RBP6.93□□□□□ -1.3
CDKL5-211ENST00000637881 PRSS27Q9BQR3 290 aa6.93□□□□□ -1.3
CDKL5-211ENST00000637881 ABHD6Q9BV23 337 aa6.93□□□□□ -1.3
CDKL5-211ENST00000637881 PARP12Q9H0J9 701 aaKnown RBP6.93□□□□□ -1.3
CDKL5-211ENST00000637881 GPR84Q9NQS5 396 aa6.93□□□□□ -1.3
CDKL5-211ENST00000637881 TM7SF3Q9NS93 570 aa6.93□□□□□ -1.3
CDKL5-211ENST00000637881 FBXO34Q9NWN3 711 aa6.93□□□□□ -1.3
CDKL5-211ENST00000637881 CLEC5AQ9NY25 188 aa6.93□□□□□ -1.3
CDKL5-211ENST00000637881 CLN8Q9UBY8 286 aa6.93□□□□□ -1.3
CDKL5-211ENST00000637881 SLC7A7Q9UM01 511 aa6.93□□□□□ -1.3
CDKL5-211ENST00000637881 LIPGQ9Y5X9 500 aa6.93□□□□□ -1.3
CDKL5-211ENST00000637881 MRPS18BQ9Y676 258 aaKnown RBP6.93□□□□□ -1.3
CDKL5-211ENST00000637881 COL4A3Q01955 1670 aa6.93□□□□□ -1.3
CDKL5-211ENST00000637881 ZNF320A2RRD8 509 aa6.92□□□□□ -1.3
CDKL5-211ENST00000637881 UPK3AO75631 287 aa6.92□□□□□ -1.3
CDKL5-211ENST00000637881 CATP04040 527 aaKnown RBP6.92□□□□□ -1.3
CDKL5-211ENST00000637881 CSN2P05814 226 aa6.92□□□□□ -1.3
CDKL5-211ENST00000637881 UCP3P55916 312 aa6.92□□□□□ -1.3
CDKL5-211ENST00000637881 RAC3P60763 192 aa6.92□□□□□ -1.3
CDKL5-211ENST00000637881 TRA2BP62995 288 aaKnown RBP6.92□□□□□ -1.3
CDKL5-211ENST00000637881 ARF5P84085 180 aa6.92□□□□□ -1.3
CDKL5-211ENST00000637881 ZXDAP98168 799 aa6.92□□□□□ -1.3
CDKL5-211ENST00000637881 HSPB3Q12988 150 aa6.92□□□□□ -1.3
CDKL5-211ENST00000637881 ANKRD55Q3KP44 614 aa6.92□□□□□ -1.3
CDKL5-211ENST00000637881 FAM71F2Q6NXP2 309 aa6.92□□□□□ -1.3
CDKL5-211ENST00000637881 TMEM182Q6ZP80 229 aaPredicted RBP6.92□□□□□ -1.3
CDKL5-211ENST00000637881 COLCA1Q6ZS62 124 aa6.92□□□□□ -1.3
CDKL5-211ENST00000637881 NIT1Q86X76 327 aa6.92□□□□□ -1.3
CDKL5-211ENST00000637881 UBALD2Q8IYN6 164 aa6.92□□□□□ -1.3
CDKL5-211ENST00000637881 NPEPL1Q8NDH3 523 aa6.92□□□□□ -1.3
CDKL5-211ENST00000637881 CMTM2Q8TAZ6 248 aa6.92□□□□□ -1.3
CDKL5-211ENST00000637881 FNDC9Q8TBE3 224 aa6.92□□□□□ -1.3
CDKL5-211ENST00000637881 ERGIC1Q969X5 290 aa6.92□□□□□ -1.3
CDKL5-211ENST00000637881 ARRDC3Q96B67 414 aa6.92□□□□□ -1.3
CDKL5-211ENST00000637881 EID2BQ96D98 161 aa6.92□□□□□ -1.3
CDKL5-211ENST00000637881 ANAPC16Q96DE5 110 aa6.92□□□□□ -1.3
CDKL5-211ENST00000637881 SLAMF6Q96DU3 332 aa6.92□□□□□ -1.3
CDKL5-211ENST00000637881 LOXL4Q96JB6 756 aa6.92□□□□□ -1.3
CDKL5-211ENST00000637881 SMIM14Q96QK8 99 aa6.92□□□□□ -1.3
CDKL5-211ENST00000637881 NUDT9Q9BW91 350 aa6.92□□□□□ -1.3
CDKL5-211ENST00000637881 PRM3Q9NNZ6 103 aa6.92□□□□□ -1.3
CDKL5-211ENST00000637881 PNO1Q9NRX1 252 aaKnown RBP6.92□□□□□ -1.3
CDKL5-211ENST00000637881 WNT16Q9UBV4 365 aa6.92□□□□□ -1.3
CDKL5-211ENST00000637881 NAT8Q9UHE5 227 aa6.92□□□□□ -1.3
CDKL5-211ENST00000637881 SLC5A6Q9Y289 635 aa6.92□□□□□ -1.3
CDKL5-211ENST00000637881 PAM16Q9Y3D7 125 aa6.92□□□□□ -1.3
CDKL5-211ENST00000637881 F5P12259 2224 aa6.92□□□□□ -1.3
CDKL5-211ENST00000637881 A0A1W2PRS3 328 aa6.92□□□□□ -1.3
CDKL5-211ENST00000637881 C17orf105B2RV13 164 aa6.92□□□□□ -1.3
CDKL5-211ENST00000637881 K7EQS6 105 aa6.92□□□□□ -1.3
CDKL5-211ENST00000637881 IGLC2P0DOY2 106 aa6.92□□□□□ -1.3
CDKL5-211ENST00000637881 IGLC3P0DOY3 106 aa6.92□□□□□ -1.3
CDKL5-211ENST00000637881 ZNF16P17020 682 aaPredicted RBP6.92□□□□□ -1.3
CDKL5-211ENST00000637881 HRH1P35367 487 aa6.92□□□□□ -1.3
CDKL5-211ENST00000637881 GABRA2P47869 451 aa6.92□□□□□ -1.3
CDKL5-211ENST00000637881 SOX2P48431 317 aa6.92□□□□□ -1.3
CDKL5-211ENST00000637881 RPL23AP62750 156 aaKnown RBP6.92□□□□□ -1.3
CDKL5-211ENST00000637881 SUPT4H1P63272 117 aaKnown RBP6.92□□□□□ -1.3
CDKL5-211ENST00000637881 HTD2P86397 168 aa6.92□□□□□ -1.3
CDKL5-211ENST00000637881 PAX2Q02962 417 aa6.92□□□□□ -1.3
CDKL5-211ENST00000637881 CEBPEQ15744 281 aa6.92□□□□□ -1.3
CDKL5-211ENST00000637881 VAMP3Q15836 100 aa6.92□□□□□ -1.3
CDKL5-211ENST00000637881 IAH1Q2TAA2 248 aaPredicted RBP6.92□□□□□ -1.3
CDKL5-211ENST00000637881 ACSF3Q4G176 576 aaPredicted RBP6.92□□□□□ -1.3
CDKL5-211ENST00000637881 SLC22A6Q4U2R8 563 aa6.92□□□□□ -1.3
CDKL5-211ENST00000637881 LRRC10Q5BKY1 277 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms