RNA–Protein interactions for RNA: ENST00000622044.1

PCDHGA11-203, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA11, Length 3,633 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-203ENST00000622044 CXorf65A6NEN9 183 aa10.01□□□□□ -0.81
PCDHGA11-203ENST00000622044 H3BQ15 152 aa10.01□□□□□ -0.81
PCDHGA11-203ENST00000622044 HMGB3O15347 200 aaKnown RBP10.01□□□□□ -0.81
PCDHGA11-203ENST00000622044 TESK1Q15569 626 aa10.01□□□□□ -0.81
PCDHGA11-203ENST00000622044 NSUN5P2Q63ZY6 315 aa10.01□□□□□ -0.81
PCDHGA11-203ENST00000622044 OR5AS1Q8N127 324 aa10.01□□□□□ -0.81
PCDHGA11-203ENST00000622044 HPSE2Q8WWQ2 592 aa10.01□□□□□ -0.81
PCDHGA11-203ENST00000622044 INTS12Q96CB8 462 aaKnown RBP10.01□□□□□ -0.81
PCDHGA11-203ENST00000622044 DKKL1Q9UK85 242 aa10.01□□□□□ -0.81
PCDHGA11-203ENST00000622044 PCNX3Q9H6A9 2034 aa10.01□□□□□ -0.81
PCDHGA11-203ENST00000622044 A0A1B0GX78 115 aa10□□□□□ -0.81
PCDHGA11-203ENST00000622044 GPR137BO60478 399 aa10□□□□□ -0.81
PCDHGA11-203ENST00000622044 RAMP1O60894 148 aa10□□□□□ -0.81
PCDHGA11-203ENST00000622044 ELLP55199 621 aaPredicted RBP10□□□□□ -0.81
PCDHGA11-203ENST00000622044 SSX2Q16385 188 aa10□□□□□ -0.81
PCDHGA11-203ENST00000622044 ZNF600Q6ZNG1 722 aa10□□□□□ -0.81
PCDHGA11-203ENST00000622044 SNX22Q96L94 193 aa10□□□□□ -0.81
PCDHGA11-203ENST00000622044 DOK5Q9P104 306 aa10□□□□□ -0.81
PCDHGA11-203ENST00000622044 SPTBN5Q9NRC6 3674 aaKnown RBP10□□□□□ -0.81
PCDHGA11-203ENST00000622044 C5orf63A6NC05 138 aa10□□□□□ -0.81
PCDHGA11-203ENST00000622044 TSPAN2O60636 221 aa10□□□□□ -0.81
PCDHGA11-203ENST00000622044 FCGR3AP08637 254 aa10□□□□□ -0.81
PCDHGA11-203ENST00000622044 HTR5AP47898 357 aa10□□□□□ -0.81
PCDHGA11-203ENST00000622044 HNRNPKP61978 463 aaKnown RBP eCLIP10□□□□□ -0.81
PCDHGA11-203ENST00000622044 DLK1P80370 383 aa10□□□□□ -0.81
PCDHGA11-203ENST00000622044 ADIRFQ15847 76 aa10□□□□□ -0.81
PCDHGA11-203ENST00000622044 PIGYQ3MUY2 71 aa10□□□□□ -0.81
PCDHGA11-203ENST00000622044 AADACL3Q5VUY0 350 aa10□□□□□ -0.81
PCDHGA11-203ENST00000622044 BTNL8Q6UX41 500 aa10□□□□□ -0.81
PCDHGA11-203ENST00000622044 THNSL2Q86YJ6 484 aa10□□□□□ -0.81
PCDHGA11-203ENST00000622044 GJC3Q8NFK1 279 aa10□□□□□ -0.81
PCDHGA11-203ENST00000622044 ST8SIA1Q92185 356 aa10□□□□□ -0.81
PCDHGA11-203ENST00000622044 MR1Q95460 341 aa10□□□□□ -0.81
PCDHGA11-203ENST00000622044 RAB39BQ96DA2 213 aa10□□□□□ -0.81
PCDHGA11-203ENST00000622044 ABHD14AQ9BUJ0 271 aa10□□□□□ -0.81
PCDHGA11-203ENST00000622044 MOB1AQ9H8S9 216 aa10□□□□□ -0.81
PCDHGA11-203ENST00000622044 SLC2A9Q9NRM0 540 aa10□□□□□ -0.81
PCDHGA11-203ENST00000622044 KCNS2Q9ULS6 477 aa10□□□□□ -0.81
PCDHGA11-203ENST00000622044 ST3GAL6Q9Y274 331 aa10□□□□□ -0.81
PCDHGA11-203ENST00000622044 SPTBN2O15020 2390 aa10□□□□□ -0.81
PCDHGA11-203ENST00000622044 TRGC2P03986 189 aa10□□□□□ -0.81
PCDHGA11-203ENST00000622044 IGHV4-34P06331 123 aa10□□□□□ -0.81
PCDHGA11-203ENST00000622044 S100GP29377 79 aa10□□□□□ -0.81
PCDHGA11-203ENST00000622044 FGF8P55075 233 aaPredicted RBP10□□□□□ -0.81
PCDHGA11-203ENST00000622044 LILRB2Q8N423 598 aa10□□□□□ -0.81
PCDHGA11-203ENST00000622044 CYB561D1Q8N8Q1 229 aa10□□□□□ -0.81
PCDHGA11-203ENST00000622044 UBALD1Q8TB05 177 aa10□□□□□ -0.81
PCDHGA11-203ENST00000622044 POM121Q96HA1 1249 aa10□□□□□ -0.81
PCDHGA11-203ENST00000622044 NAA60Q9H7X0 242 aa10□□□□□ -0.81
PCDHGA11-203ENST00000622044 VPS13AQ96RL7 3174 aa9.99□□□□□ -0.81
PCDHGA11-203ENST00000622044 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.99□□□□□ -0.81
PCDHGA11-203ENST00000622044 IGHV3-64DA0A0J9YX35 117 aa9.99□□□□□ -0.81
PCDHGA11-203ENST00000622044 RBFOX3A6NFN3 312 aa9.99□□□□□ -0.81
PCDHGA11-203ENST00000622044 LIPT2A6NK58 231 aa9.99□□□□□ -0.81
PCDHGA11-203ENST00000622044 F10P00742 488 aa9.99□□□□□ -0.81
PCDHGA11-203ENST00000622044 CD63P08962 238 aa9.99□□□□□ -0.81
PCDHGA11-203ENST00000622044 OR8U8P0C7N1 319 aa9.99□□□□□ -0.81
PCDHGA11-203ENST00000622044 RNF224P0DH78 156 aa9.99□□□□□ -0.81
PCDHGA11-203ENST00000622044 MSR1P21757 451 aa9.99□□□□□ -0.81
PCDHGA11-203ENST00000622044 HAAOP46952 286 aa9.99□□□□□ -0.81
PCDHGA11-203ENST00000622044 GRB2P62993 217 aaKnown RBP9.99□□□□□ -0.81
PCDHGA11-203ENST00000622044 IGLV3-21P80748 117 aaPredicted RBP9.99□□□□□ -0.81
PCDHGA11-203ENST00000622044 OR10S1Q8NGN2 331 aa9.99□□□□□ -0.81
PCDHGA11-203ENST00000622044 CLDN16Q9Y5I7 305 aa9.99□□□□□ -0.81
PCDHGA11-203ENST00000622044 KLF2Q9Y5W3 355 aaPredicted RBP9.99□□□□□ -0.81
PCDHGA11-203ENST00000622044 TTC28Q96AY4 2481 aa9.99□□□□□ -0.81
PCDHGA11-203ENST00000622044 TGIF2-C20orf24A0A0A6YYL0 155 aa9.99□□□□□ -0.81
PCDHGA11-203ENST00000622044 A0A0U1RQK1 487 aa9.99□□□□□ -0.81
PCDHGA11-203ENST00000622044 ANKUB1A6NFN9 424 aa9.99□□□□□ -0.81
PCDHGA11-203ENST00000622044 CEBPZOSA8MTT3 80 aa9.99□□□□□ -0.81
PCDHGA11-203ENST00000622044 GEMIN2O14893 280 aaKnown RBP9.99□□□□□ -0.81
PCDHGA11-203ENST00000622044 HOXC4P09017 264 aaPredicted RBP9.99□□□□□ -0.81
PCDHGA11-203ENST00000622044 ATP6V0CP27449 155 aa9.99□□□□□ -0.81
PCDHGA11-203ENST00000622044 MRPS21P82921 87 aaKnown RBP9.99□□□□□ -0.81
PCDHGA11-203ENST00000622044 BEND4Q6ZU67 534 aa9.99□□□□□ -0.81
PCDHGA11-203ENST00000622044 WDFY1Q8IWB7 410 aa9.99□□□□□ -0.81
PCDHGA11-203ENST00000622044 OR2C3Q8N628 320 aa9.99□□□□□ -0.81
PCDHGA11-203ENST00000622044 CA5BP1Q8WTZ4 195 aa9.99□□□□□ -0.81
PCDHGA11-203ENST00000622044 METTL1Q9UBP6 276 aaKnown RBP9.99□□□□□ -0.81
PCDHGA11-203ENST00000622044 A0A1B0GV90 55 aa9.99□□□□□ -0.81
PCDHGA11-203ENST00000622044 CYTIPO60759 359 aa9.99□□□□□ -0.81
PCDHGA11-203ENST00000622044 SERPINE2P07093 398 aa9.99□□□□□ -0.81
PCDHGA11-203ENST00000622044 LFNGQ8NES3 379 aa9.99□□□□□ -0.81
PCDHGA11-203ENST00000622044 OR5L2Q8NGL0 311 aa9.99□□□□□ -0.81
PCDHGA11-203ENST00000622044 ALKBH3Q96Q83 286 aaPredicted RBP9.99□□□□□ -0.81
PCDHGA11-203ENST00000622044 HSF4Q9ULV5 492 aa9.99□□□□□ -0.81
PCDHGA11-203ENST00000622044 STRAPQ9Y3F4 350 aaKnown RBP9.99□□□□□ -0.81
PCDHGA11-203ENST00000622044 TRANK1O15050 2925 aa9.98□□□□□ -0.81
PCDHGA11-203ENST00000622044 A0A1W2PPC4 97 aa9.98□□□□□ -0.81
PCDHGA11-203ENST00000622044 DBX1A6NMT0 343 aa9.98□□□□□ -0.81
PCDHGA11-203ENST00000622044 UBE2CO00762 179 aa9.98□□□□□ -0.81
PCDHGA11-203ENST00000622044 YKT6O15498 198 aa9.98□□□□□ -0.81
PCDHGA11-203ENST00000622044 IGKV3-11P04433 115 aa9.98□□□□□ -0.81
PCDHGA11-203ENST00000622044 CD5P06127 495 aa9.98□□□□□ -0.81
PCDHGA11-203ENST00000622044 KLK3P07288 261 aaPredicted RBP9.98□□□□□ -0.81
PCDHGA11-203ENST00000622044 ZNF133P52736 654 aaPredicted RBP9.98□□□□□ -0.81
PCDHGA11-203ENST00000622044 EFNA3P52797 238 aa9.98□□□□□ -0.81
PCDHGA11-203ENST00000622044 RAB1AP62820 205 aa9.98□□□□□ -0.81
PCDHGA11-203ENST00000622044 FAM3AP98173 230 aa9.98□□□□□ -0.81
PCDHGA11-203ENST00000622044 UBE2V2Q15819 145 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms