RNA–Protein interactions for RNA: ENST00000621399.1

CIRBP-245, Transcript of cold inducible RNA binding protein, humanhuman

TSL 1 (best)

Gene CIRBP, Length 1,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-245ENST00000621399 MED30Q96HR3 178 aa15.47■□□□□ 0.07
CIRBP-245ENST00000621399 NKX3-1Q99801 234 aaPredicted RBP15.47■□□□□ 0.07
CIRBP-245ENST00000621399 FAM192AQ9GZU8 254 aa15.47■□□□□ 0.07
CIRBP-245ENST00000621399 ZNF696Q9H7X3 374 aa15.47■□□□□ 0.07
CIRBP-245ENST00000621399 RBFOX1Q9NWB1 397 aaKnown RBP15.47■□□□□ 0.07
CIRBP-245ENST00000621399 NDUFB11Q9NX14 153 aa15.47■□□□□ 0.07
CIRBP-245ENST00000621399 OR5V1Q9UGF6 321 aa15.47■□□□□ 0.07
CIRBP-245ENST00000621399 ABCA1O95477 2261 aa15.47■□□□□ 0.07
CIRBP-245ENST00000621399 A0A1B0GW55 424 aa15.46■□□□□ 0.07
CIRBP-245ENST00000621399 MAGEA13PA6NCF6 341 aa15.46■□□□□ 0.07
CIRBP-245ENST00000621399 A8MXK9 166 aa15.46■□□□□ 0.07
CIRBP-245ENST00000621399 DVL1O14640 695 aa15.46■□□□□ 0.07
CIRBP-245ENST00000621399 KNG1P01042 644 aa15.46■□□□□ 0.07
CIRBP-245ENST00000621399 UCHL1P09936 223 aa15.46■□□□□ 0.07
CIRBP-245ENST00000621399 DUX4L2P0CJ85 424 aa15.46■□□□□ 0.07
CIRBP-245ENST00000621399 DUX4L3P0CJ86 424 aa15.46■□□□□ 0.07
CIRBP-245ENST00000621399 DUX4L4P0CJ87 422 aa15.46■□□□□ 0.07
CIRBP-245ENST00000621399 DUX4L5P0CJ88 424 aa15.46■□□□□ 0.07
CIRBP-245ENST00000621399 DUX4L6P0CJ89 424 aa15.46■□□□□ 0.07
CIRBP-245ENST00000621399 DUX4L7P0CJ90 424 aa15.46■□□□□ 0.07
CIRBP-245ENST00000621399 PRDX2P32119 198 aa15.46■□□□□ 0.07
CIRBP-245ENST00000621399 NPY4RP50391 375 aa15.46■□□□□ 0.07
CIRBP-245ENST00000621399 FABP5Q01469 135 aa15.46■□□□□ 0.07
CIRBP-245ENST00000621399 IKZF1Q13422 519 aa15.46■□□□□ 0.07
CIRBP-245ENST00000621399 DUX4L9Q6RFH8 374 aaPredicted RBP15.46■□□□□ 0.07
CIRBP-245ENST00000621399 ZNF788Q6ZQV5 615 aa15.46■□□□□ 0.07
CIRBP-245ENST00000621399 FAM58AQ8N1B3 248 aa15.46■□□□□ 0.07
CIRBP-245ENST00000621399 JAGN1Q8N5M9 183 aa15.46■□□□□ 0.07
CIRBP-245ENST00000621399 PNLDC1Q8NA58 520 aaKnown RBP15.46■□□□□ 0.07
CIRBP-245ENST00000621399 PHYHIPQ92561 330 aa15.46■□□□□ 0.07
CIRBP-245ENST00000621399 SLITRK2Q9H156 845 aa15.46■□□□□ 0.07
CIRBP-245ENST00000621399 PPIL3Q9H2H8 161 aaKnown RBP15.46■□□□□ 0.07
CIRBP-245ENST00000621399 ELL3Q9HB65 397 aaPredicted RBP15.46■□□□□ 0.07
CIRBP-245ENST00000621399 DUX4Q9UBX2 424 aa15.46■□□□□ 0.07
CIRBP-245ENST00000621399 OR14J1Q9UGF5 321 aa15.46■□□□□ 0.07
CIRBP-245ENST00000621399 MEGF11A6BM72 1044 aa15.45■□□□□ 0.06
CIRBP-245ENST00000621399 KIAA1324LA8MWY0 1029 aaPredicted RBP15.45■□□□□ 0.06
CIRBP-245ENST00000621399 NDUFB3O43676 98 aa15.45■□□□□ 0.06
CIRBP-245ENST00000621399 ARL6IP5O75915 188 aa15.45■□□□□ 0.06
CIRBP-245ENST00000621399 KDM4BO94953 1096 aa15.45■□□□□ 0.06
CIRBP-245ENST00000621399 CALCBP10092 127 aa15.45■□□□□ 0.06
CIRBP-245ENST00000621399 SRMP19623 302 aa15.45■□□□□ 0.06
CIRBP-245ENST00000621399 PTGFRP43088 359 aa15.45■□□□□ 0.06
CIRBP-245ENST00000621399 OR3A4PP47883 348 aa15.45■□□□□ 0.06
CIRBP-245ENST00000621399 GP2P55259 537 aaKnown RBP15.45■□□□□ 0.06
CIRBP-245ENST00000621399 IL13RA1P78552 427 aa15.45■□□□□ 0.06
CIRBP-245ENST00000621399 FAHD2BQ6P2I3 314 aaPredicted RBP15.45■□□□□ 0.06
CIRBP-245ENST00000621399 FIP1L1Q6UN15 594 aaKnown RBP15.45■□□□□ 0.06
CIRBP-245ENST00000621399 C1QL2Q7Z5L3 287 aa15.45■□□□□ 0.06
CIRBP-245ENST00000621399 CD177Q8N6Q3 437 aa15.45■□□□□ 0.06
CIRBP-245ENST00000621399 FAHD2AQ96GK7 314 aa15.45■□□□□ 0.06
CIRBP-245ENST00000621399 GAFA1Q96PS6 74 aa15.45■□□□□ 0.06
CIRBP-245ENST00000621399 VCX3AQ9NNX9 186 aa15.45■□□□□ 0.06
CIRBP-245ENST00000621399 ZNF222Q9UK12 451 aa15.45■□□□□ 0.06
CIRBP-245ENST00000621399 LOC105371242A0A075B767 164 aa15.44■□□□□ 0.06
CIRBP-245ENST00000621399 SIGLEC5O15389 551 aa15.44■□□□□ 0.06
CIRBP-245ENST00000621399 PRKACAP17612 351 aa15.44■□□□□ 0.06
CIRBP-245ENST00000621399 CEBPDP49716 269 aaPredicted RBP15.44■□□□□ 0.06
CIRBP-245ENST00000621399 SNU13P55769 128 aaKnown RBP15.44■□□□□ 0.06
CIRBP-245ENST00000621399 RSU1Q15404 277 aa15.44■□□□□ 0.06
CIRBP-245ENST00000621399 LRRC10Q5BKY1 277 aa15.44■□□□□ 0.06
CIRBP-245ENST00000621399 SYT6Q5T7P8 510 aaPredicted RBP15.44■□□□□ 0.06
CIRBP-245ENST00000621399 DCAF12L2Q5VW00 463 aa15.44■□□□□ 0.06
CIRBP-245ENST00000621399 CDH26Q8IXH8 852 aa15.44■□□□□ 0.06
CIRBP-245ENST00000621399 NKAIN3Q8N8D7 197 aa15.44■□□□□ 0.06
CIRBP-245ENST00000621399 PXT1Q8NFP0 134 aa15.44■□□□□ 0.06
CIRBP-245ENST00000621399 ST8SIA4Q92187 359 aa15.44■□□□□ 0.06
CIRBP-245ENST00000621399 SDSLQ96GA7 329 aa15.44■□□□□ 0.06
CIRBP-245ENST00000621399 NR1H4Q96RI1 486 aaPredicted RBP15.44■□□□□ 0.06
CIRBP-245ENST00000621399 S100A13Q99584 98 aa15.44■□□□□ 0.06
CIRBP-245ENST00000621399 RHOFQ9HBH0 211 aa15.44■□□□□ 0.06
CIRBP-245ENST00000621399 HMG20AQ9NP66 347 aa15.44■□□□□ 0.06
CIRBP-245ENST00000621399 MMP26Q9NRE1 261 aa15.44■□□□□ 0.06
CIRBP-245ENST00000621399 ING4Q9UNL4 249 aa15.44■□□□□ 0.06
CIRBP-245ENST00000621399 POLR3KQ9Y2Y1 108 aaPredicted RBP15.44■□□□□ 0.06
CIRBP-245ENST00000621399 ABCA2Q9BZC7 2435 aa15.44■□□□□ 0.06
CIRBP-245ENST00000621399 PPIAL4CA0A0B4J2A2 164 aa15.43■□□□□ 0.06
CIRBP-245ENST00000621399 A0A0G2JMP0 313 aa15.43■□□□□ 0.06
CIRBP-245ENST00000621399 A0A0X1KG70 313 aa15.43■□□□□ 0.06
CIRBP-245ENST00000621399 INAFM1C9JVW0 142 aa15.43■□□□□ 0.06
CIRBP-245ENST00000621399 CDRT1O95170 752 aa15.43■□□□□ 0.06
CIRBP-245ENST00000621399 SFTPBP07988 381 aa15.43■□□□□ 0.06
CIRBP-245ENST00000621399 SELLP14151 372 aa15.43■□□□□ 0.06
CIRBP-245ENST00000621399 CALRP27797 417 aaKnown RBP15.43■□□□□ 0.06
CIRBP-245ENST00000621399 DGUOKQ16854 277 aa15.43■□□□□ 0.06
CIRBP-245ENST00000621399 CD276Q5ZPR3 534 aa15.43■□□□□ 0.06
CIRBP-245ENST00000621399 LRRTM1Q86UE6 522 aa15.43■□□□□ 0.06
CIRBP-245ENST00000621399 ZNRF1Q8ND25 227 aa15.43■□□□□ 0.06
CIRBP-245ENST00000621399 OR4M2Q8NGB6 313 aa15.43■□□□□ 0.06
CIRBP-245ENST00000621399 MUL1Q969V5 352 aa15.43■□□□□ 0.06
CIRBP-245ENST00000621399 IL36RNQ9UBH0 155 aa15.43■□□□□ 0.06
CIRBP-245ENST00000621399 GSTK1Q9Y2Q3 226 aa15.43■□□□□ 0.06
CIRBP-245ENST00000621399 MAB21L2Q9Y586 359 aa15.43■□□□□ 0.06
CIRBP-245ENST00000621399 YLPM1P49750 1951 aaKnown RBP15.43■□□□□ 0.06
CIRBP-245ENST00000621399 HIVEP2P31629 2446 aa15.43■□□□□ 0.06
CIRBP-245ENST00000621399 TRDV1A0A1B0GX56 115 aa15.42■□□□□ 0.06
CIRBP-245ENST00000621399 FCN3O75636 299 aa15.42■□□□□ 0.06
CIRBP-245ENST00000621399 ADRA2CP18825 462 aa15.42■□□□□ 0.06
CIRBP-245ENST00000621399 GATA3P23771 443 aa15.42■□□□□ 0.06
CIRBP-245ENST00000621399 DUSP1P28562 367 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms