RNA–Protein interactions for RNA: ENST00000620787.4

PDLIM3-212, Transcript of PDZ and LIM domain 3, humanhuman

TSL 4 BASIC

Gene PDLIM3, Length 2,352 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-212ENST00000620787 TAF9Q16594 264 aa17.04■□□□□ 0.32
PDLIM3-212ENST00000620787 FAM69BQ5VUD6 431 aa17.04■□□□□ 0.32
PDLIM3-212ENST00000620787 HEPN1Q6WQI6 88 aa17.04■□□□□ 0.32
PDLIM3-212ENST00000620787 FBXW12Q6X9E4 464 aa17.04■□□□□ 0.32
PDLIM3-212ENST00000620787 LFNGQ8NES3 379 aa17.04■□□□□ 0.32
PDLIM3-212ENST00000620787 FAM213BQ8TBF2 198 aa17.04■□□□□ 0.32
PDLIM3-212ENST00000620787 SLC22A8Q8TCC7 542 aa17.04■□□□□ 0.32
PDLIM3-212ENST00000620787 RARRES2Q99969 163 aa17.04■□□□□ 0.32
PDLIM3-212ENST00000620787 WDR77Q9BQA1 342 aaPredicted RBP17.04■□□□□ 0.32
PDLIM3-212ENST00000620787 NELFAQ9H3P2 528 aa17.04■□□□□ 0.32
PDLIM3-212ENST00000620787 SLC2A9Q9NRM0 540 aa17.04■□□□□ 0.32
PDLIM3-212ENST00000620787 HSF4Q9ULV5 492 aa17.04■□□□□ 0.32
PDLIM3-212ENST00000620787 IGLV3-12A0A075B6K2 115 aa17.04■□□□□ 0.32
PDLIM3-212ENST00000620787 CCDC187A0A096LP49 1063 aa17.04■□□□□ 0.32
PDLIM3-212ENST00000620787 TRBV23-1A0A0A0MS06 115 aa17.04■□□□□ 0.32
PDLIM3-212ENST00000620787 TLX3O43711 291 aaPredicted RBP17.04■□□□□ 0.32
PDLIM3-212ENST00000620787 ANGPTL7O43827 346 aa17.04■□□□□ 0.32
PDLIM3-212ENST00000620787 IFNA17P01571 189 aa17.04■□□□□ 0.32
PDLIM3-212ENST00000620787 DBHP09172 617 aa17.04■□□□□ 0.32
PDLIM3-212ENST00000620787 GLI4P10075 376 aa17.04■□□□□ 0.32
PDLIM3-212ENST00000620787 DTYMKP23919 212 aa17.04■□□□□ 0.32
PDLIM3-212ENST00000620787 OTX1P32242 354 aaPredicted RBP17.04■□□□□ 0.32
PDLIM3-212ENST00000620787 OR5L1Q8NGL2 311 aa17.04■□□□□ 0.32
PDLIM3-212ENST00000620787 NABP1Q96AH0 204 aa17.04■□□□□ 0.32
PDLIM3-212ENST00000620787 C10orf35Q96D05 121 aa17.04■□□□□ 0.32
PDLIM3-212ENST00000620787 BCL2L14Q9BZR8 327 aa17.04■□□□□ 0.32
PDLIM3-212ENST00000620787 ST8SIA3O43173 380 aa17.03■□□□□ 0.32
PDLIM3-212ENST00000620787 OR2C1O95371 312 aa17.03■□□□□ 0.32
PDLIM3-212ENST00000620787 AKR7LQ8NHP1 331 aa17.03■□□□□ 0.32
PDLIM3-212ENST00000620787 DYRK2Q92630 601 aa17.03■□□□□ 0.32
PDLIM3-212ENST00000620787 METTL9Q9H1A3 318 aa17.03■□□□□ 0.32
PDLIM3-212ENST00000620787 SPRY1O43609 319 aaPredicted RBP17.03■□□□□ 0.32
PDLIM3-212ENST00000620787 FBP1P09467 338 aa17.03■□□□□ 0.32
PDLIM3-212ENST00000620787 MYF5P13349 255 aa17.03■□□□□ 0.32
PDLIM3-212ENST00000620787 EN2P19622 333 aaPredicted RBP17.03■□□□□ 0.32
PDLIM3-212ENST00000620787 MTCP1P56278 107 aa17.03■□□□□ 0.32
PDLIM3-212ENST00000620787 HIST1H3AP68431 136 aa17.03■□□□□ 0.32
PDLIM3-212ENST00000620787 C10orf128Q5T292 105 aa17.03■□□□□ 0.32
PDLIM3-212ENST00000620787 HIST2H3PS2Q5TEC6 136 aa17.03■□□□□ 0.32
PDLIM3-212ENST00000620787 LRRC18Q8N456 261 aa17.03■□□□□ 0.32
PDLIM3-212ENST00000620787 PUS1Q9Y606 427 aaKnown RBP eCLIP17.03■□□□□ 0.32
PDLIM3-212ENST00000620787 TRIOO75962 3097 aa17.03■□□□□ 0.32
PDLIM3-212ENST00000620787 SPAG17Q6Q759 2223 aa17.02■□□□□ 0.32
PDLIM3-212ENST00000620787 M0R135 149 aa17.02■□□□□ 0.32
PDLIM3-212ENST00000620787 OR2J2O76002 312 aa17.02■□□□□ 0.32
PDLIM3-212ENST00000620787 HTR5AP47898 357 aa17.02■□□□□ 0.32
PDLIM3-212ENST00000620787 SNAI3Q3KNW1 292 aa17.02■□□□□ 0.32
PDLIM3-212ENST00000620787 SOHLH1Q5JUK2 328 aa17.02■□□□□ 0.32
PDLIM3-212ENST00000620787 RHBDD2Q6NTF9 364 aa17.02■□□□□ 0.32
PDLIM3-212ENST00000620787 FOXL2NBQ6ZUU3 175 aa17.02■□□□□ 0.32
PDLIM3-212ENST00000620787 LGI3Q8N145 548 aa17.02■□□□□ 0.32
PDLIM3-212ENST00000620787 SUMF2Q8NBJ7 301 aa17.02■□□□□ 0.32
PDLIM3-212ENST00000620787 ZNF799Q96GE5 643 aa17.02■□□□□ 0.32
PDLIM3-212ENST00000620787 ANGPTL4Q9BY76 406 aa17.02■□□□□ 0.32
PDLIM3-212ENST00000620787 GUCA1AP43080 201 aaPredicted RBP17.02■□□□□ 0.31
PDLIM3-212ENST00000620787 ASCL1P50553 236 aa17.02■□□□□ 0.31
PDLIM3-212ENST00000620787 EWSR1Q01844 656 aaKnown RBP eCLIP17.02■□□□□ 0.31
PDLIM3-212ENST00000620787 CHAF1BQ13112 559 aa17.02■□□□□ 0.31
PDLIM3-212ENST00000620787 RSU1Q15404 277 aa17.02■□□□□ 0.31
PDLIM3-212ENST00000620787 OR4D5Q8NGN0 318 aa17.02■□□□□ 0.31
PDLIM3-212ENST00000620787 OR11L1Q8NGX0 322 aa17.02■□□□□ 0.31
PDLIM3-212ENST00000620787 MUCL1Q96DR8 90 aa17.02■□□□□ 0.31
PDLIM3-212ENST00000620787 BOD1Q96IK1 185 aa17.02■□□□□ 0.31
PDLIM3-212ENST00000620787 GGACTQ9BVM4 153 aa17.02■□□□□ 0.31
PDLIM3-212ENST00000620787 RFNGQ9Y644 331 aa17.02■□□□□ 0.31
PDLIM3-212ENST00000620787 EYSQ5T1H1 3165 aa17.01■□□□□ 0.31
PDLIM3-212ENST00000620787 IGKV1-27A0A075B6S5 117 aa17.01■□□□□ 0.31
PDLIM3-212ENST00000620787 CCL20P78556 96 aa17.01■□□□□ 0.31
PDLIM3-212ENST00000620787 C20orf196Q8IYI0 205 aa17.01■□□□□ 0.31
PDLIM3-212ENST00000620787 WDSUB1Q8N9V3 476 aa17.01■□□□□ 0.31
PDLIM3-212ENST00000620787 OR5L2Q8NGL0 311 aa17.01■□□□□ 0.31
PDLIM3-212ENST00000620787 TMEM54Q969K7 222 aa17.01■□□□□ 0.31
PDLIM3-212ENST00000620787 SGK3Q96BR1 496 aa17.01■□□□□ 0.31
PDLIM3-212ENST00000620787 SMDT1Q9H4I9 107 aa17.01■□□□□ 0.31
PDLIM3-212ENST00000620787 C11orf1Q9H5F2 150 aa17.01■□□□□ 0.31
PDLIM3-212ENST00000620787 MYOTQ9UBF9 498 aa17.01■□□□□ 0.31
PDLIM3-212ENST00000620787 BRWD1Q9NSI6 2320 aa17.01■□□□□ 0.31
PDLIM3-212ENST00000620787 GPR37O15354 613 aa17.01■□□□□ 0.31
PDLIM3-212ENST00000620787 SLC22A25Q6T423 547 aa17.01■□□□□ 0.31
PDLIM3-212ENST00000620787 CCDC54Q8NEL0 328 aa17.01■□□□□ 0.31
PDLIM3-212ENST00000620787 TSTD1Q8NFU3 115 aa17.01■□□□□ 0.31
PDLIM3-212ENST00000620787 SHANK1Q9Y566 2161 aa17.01■□□□□ 0.31
PDLIM3-212ENST00000620787 IFITM10A6NMD0 228 aa17■□□□□ 0.31
PDLIM3-212ENST00000620787 PIAS2O75928 621 aa17■□□□□ 0.31
PDLIM3-212ENST00000620787 NR2C1P13056 603 aa17■□□□□ 0.31
PDLIM3-212ENST00000620787 HOXA5P20719 270 aa17■□□□□ 0.31
PDLIM3-212ENST00000620787 HIKESHIQ53FT3 197 aa17■□□□□ 0.31
PDLIM3-212ENST00000620787 CDCP2Q5VXM1 449 aa17■□□□□ 0.31
PDLIM3-212ENST00000620787 SYT13Q7L8C5 426 aa17■□□□□ 0.31
PDLIM3-212ENST00000620787 KMT5CQ86Y97 462 aa17■□□□□ 0.31
PDLIM3-212ENST00000620787 MR1Q95460 341 aa17■□□□□ 0.31
PDLIM3-212ENST00000620787 TOLLIPQ9H0E2 274 aa17■□□□□ 0.31
PDLIM3-212ENST00000620787 YIF1AO95070 293 aa17■□□□□ 0.31
PDLIM3-212ENST00000620787 NXPH1P58417 271 aa17■□□□□ 0.31
PDLIM3-212ENST00000620787 KIAA0141Q14154 515 aaPredicted RBP17■□□□□ 0.31
PDLIM3-212ENST00000620787 SPSB3Q6PJ21 355 aa17■□□□□ 0.31
PDLIM3-212ENST00000620787 BRICD5Q6PL45 260 aa17■□□□□ 0.31
PDLIM3-212ENST00000620787 FADS6Q8N9I5 356 aa17■□□□□ 0.31
PDLIM3-212ENST00000620787 SPSB1Q96BD6 273 aa17■□□□□ 0.31
PDLIM3-212ENST00000620787 MOB3AQ96BX8 217 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms