RNA–Protein interactions for RNA: ENST00000620676.4

VPS13D-214, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13D, Length 16,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-214ENST00000620676 ZNF418Q8TF45 676 aaPredicted RBP4.48□□□□□ -1.69
VPS13D-214ENST00000620676 GALNT14Q96FL9 552 aa4.48□□□□□ -1.69
VPS13D-214ENST00000620676 MANBALQ9NQG1 85 aa4.48□□□□□ -1.69
VPS13D-214ENST00000620676 LINC01553A4QN01 128 aa4.48□□□□□ -1.69
VPS13D-214ENST00000620676 KRASP01116 189 aa4.48□□□□□ -1.69
VPS13D-214ENST00000620676 HNRNPA1P09651 372 aaKnown RBP eCLIP4.48□□□□□ -1.69
VPS13D-214ENST00000620676 EFNB1P98172 346 aa4.48□□□□□ -1.69
VPS13D-214ENST00000620676 AESQ08117 197 aa4.48□□□□□ -1.69
VPS13D-214ENST00000620676 HNRNPA1L2Q32P51 320 aaKnown RBP4.48□□□□□ -1.69
VPS13D-214ENST00000620676 WDR73Q6P4I2 378 aa4.48□□□□□ -1.69
VPS13D-214ENST00000620676 SLC22A12Q96S37 553 aa4.48□□□□□ -1.69
VPS13D-214ENST00000620676 PARP11Q9NR21 331 aa4.48□□□□□ -1.69
VPS13D-214ENST00000620676 MRPS18BQ9Y676 258 aaKnown RBP4.48□□□□□ -1.69
VPS13D-214ENST00000620676 A0A1W2PQU0 124 aa4.48□□□□□ -1.69
VPS13D-214ENST00000620676 IFITM10A6NMD0 228 aa4.48□□□□□ -1.69
VPS13D-214ENST00000620676 FABP2P12104 132 aa4.48□□□□□ -1.69
VPS13D-214ENST00000620676 CEACAM1P13688 526 aa4.48□□□□□ -1.69
VPS13D-214ENST00000620676 TIGITQ495A1 244 aa4.48□□□□□ -1.69
VPS13D-214ENST00000620676 ARIH2OSQ8N7S6 290 aa4.48□□□□□ -1.69
VPS13D-214ENST00000620676 ZDHHC22Q8N966 263 aa4.48□□□□□ -1.69
VPS13D-214ENST00000620676 OR10G4Q8NGN3 311 aa4.48□□□□□ -1.69
VPS13D-214ENST00000620676 OR10G9Q8NGN4 311 aa4.48□□□□□ -1.69
VPS13D-214ENST00000620676 OR10G7Q8NGN6 311 aa4.48□□□□□ -1.69
VPS13D-214ENST00000620676 IRF7Q92985 503 aa4.48□□□□□ -1.69
VPS13D-214ENST00000620676 MARS2Q96GW9 593 aaKnown RBP4.48□□□□□ -1.69
VPS13D-214ENST00000620676 TRAV14DV4A0A0A6YYC5 116 aa4.48□□□□□ -1.69
VPS13D-214ENST00000620676 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4.48□□□□□ -1.69
VPS13D-214ENST00000620676 OLFM2O95897 454 aa4.48□□□□□ -1.69
VPS13D-214ENST00000620676 GPM6AP51674 278 aa4.48□□□□□ -1.69
VPS13D-214ENST00000620676 PNLIPRP3Q17RR3 467 aa4.48□□□□□ -1.69
VPS13D-214ENST00000620676 OR2T6Q8NHC8 308 aa4.48□□□□□ -1.69
VPS13D-214ENST00000620676 LOXL4Q96JB6 756 aa4.48□□□□□ -1.69
VPS13D-214ENST00000620676 CDH20Q9HBT6 801 aa4.48□□□□□ -1.69
VPS13D-214ENST00000620676 PIEZO1Q92508 2521 aa4.48□□□□□ -1.69
VPS13D-214ENST00000620676 MSGN1A6NI15 193 aa4.48□□□□□ -1.69
VPS13D-214ENST00000620676 HSBP1O75506 76 aa4.48□□□□□ -1.69
VPS13D-214ENST00000620676 SELPP16109 830 aa4.48□□□□□ -1.69
VPS13D-214ENST00000620676 SLC26A10Q8NG04 563 aa4.48□□□□□ -1.69
VPS13D-214ENST00000620676 SMIM12Q96EX1 92 aa4.48□□□□□ -1.69
VPS13D-214ENST00000620676 WDR61Q9GZS3 305 aaKnown RBP4.48□□□□□ -1.69
VPS13D-214ENST00000620676 NAA60Q9H7X0 242 aa4.48□□□□□ -1.69
VPS13D-214ENST00000620676 HKR1P10072 659 aa4.48□□□□□ -1.69
VPS13D-214ENST00000620676 PSG1P11464 419 aa4.48□□□□□ -1.69
VPS13D-214ENST00000620676 NOVP48745 357 aa4.48□□□□□ -1.69
VPS13D-214ENST00000620676 GABREP78334 506 aa4.48□□□□□ -1.69
VPS13D-214ENST00000620676 GPM6BQ13491 265 aa4.48□□□□□ -1.69
VPS13D-214ENST00000620676 TMEM97Q5BJF2 176 aa4.48□□□□□ -1.69
VPS13D-214ENST00000620676 MRPL21Q7Z2W9 205 aaKnown RBP4.48□□□□□ -1.69
VPS13D-214ENST00000620676 ABHD3Q8WU67 409 aa4.48□□□□□ -1.69
VPS13D-214ENST00000620676 SPACA9Q96E40 222 aaPredicted RBP4.48□□□□□ -1.69
VPS13D-214ENST00000620676 MS4A8Q9BY19 250 aa4.48□□□□□ -1.69
VPS13D-214ENST00000620676 ZNF253O75346 499 aa4.47□□□□□ -1.69
VPS13D-214ENST00000620676 NUDT3O95989 172 aa4.47□□□□□ -1.69
VPS13D-214ENST00000620676 DUSP2Q05923 314 aa4.47□□□□□ -1.69
VPS13D-214ENST00000620676 MORN1Q5T089 497 aa4.47□□□□□ -1.69
VPS13D-214ENST00000620676 RDH5Q92781 318 aa4.47□□□□□ -1.69
VPS13D-214ENST00000620676 NPDC1Q9NQX5 325 aaPredicted RBP4.47□□□□□ -1.69
VPS13D-214ENST00000620676 TOX3O15405 576 aaPredicted RBP4.47□□□□□ -1.69
VPS13D-214ENST00000620676 HOXD9P28356 352 aaPredicted RBP4.47□□□□□ -1.69
VPS13D-214ENST00000620676 FAM3AP98173 230 aa4.47□□□□□ -1.69
VPS13D-214ENST00000620676 MGAT2Q10469 447 aa4.47□□□□□ -1.69
VPS13D-214ENST00000620676 IZUMO4Q1ZYL8 232 aa4.47□□□□□ -1.69
VPS13D-214ENST00000620676 CLLU1OSQ5K130 101 aa4.47□□□□□ -1.69
VPS13D-214ENST00000620676 GNPNAT1Q96EK6 184 aaPredicted RBP4.47□□□□□ -1.69
VPS13D-214ENST00000620676 LPAR2Q9HBW0 351 aa4.47□□□□□ -1.69
VPS13D-214ENST00000620676 CCL26Q9Y258 94 aa4.47□□□□□ -1.69
VPS13D-214ENST00000620676 CYR61O00622 381 aa4.47□□□□□ -1.69
VPS13D-214ENST00000620676 P2RY2P41231 377 aa4.47□□□□□ -1.69
VPS13D-214ENST00000620676 SP3Q02447 781 aa4.47□□□□□ -1.69
VPS13D-214ENST00000620676 FCRL6Q6DN72 434 aa4.47□□□□□ -1.69
VPS13D-214ENST00000620676 SLC35E4Q6ICL7 350 aa4.47□□□□□ -1.69
VPS13D-214ENST00000620676 EDAQ92838 391 aa4.47□□□□□ -1.69
VPS13D-214ENST00000620676 TMEM184BQ9Y519 407 aaPredicted RBP4.47□□□□□ -1.69
VPS13D-214ENST00000620676 WDR1O75083 606 aa4.47□□□□□ -1.69
VPS13D-214ENST00000620676 CDS2O95674 445 aa4.47□□□□□ -1.69
VPS13D-214ENST00000620676 CA6P23280 308 aa4.47□□□□□ -1.69
VPS13D-214ENST00000620676 GPR6P46095 362 aaPredicted RBP4.47□□□□□ -1.69
VPS13D-214ENST00000620676 FBXL14Q8N1E6 418 aa4.47□□□□□ -1.69
VPS13D-214ENST00000620676 KREMEN2Q8NCW0 462 aa4.47□□□□□ -1.69
VPS13D-214ENST00000620676 SLC25A43Q8WUT9 341 aaPredicted RBP4.47□□□□□ -1.69
VPS13D-214ENST00000620676 ASB10Q8WXI3 467 aa4.47□□□□□ -1.69
VPS13D-214ENST00000620676 DERL1Q9BUN8 251 aa4.47□□□□□ -1.69
VPS13D-214ENST00000620676 WBP1LQ9NX94 342 aa4.47□□□□□ -1.69
VPS13D-214ENST00000620676 MTCH2Q9Y6C9 303 aa4.47□□□□□ -1.69
VPS13D-214ENST00000620676 TMED7-TICAM2A0A0A6YYA0 188 aa4.47□□□□□ -1.69
VPS13D-214ENST00000620676 IGHG1P01857 330 aa4.47□□□□□ -1.69
VPS13D-214ENST00000620676 EDDM3AQ14507 147 aa4.47□□□□□ -1.69
VPS13D-214ENST00000620676 OR10G8Q8NGN5 311 aa4.47□□□□□ -1.69
VPS13D-214ENST00000620676 SLC2A8Q9NY64 477 aa4.47□□□□□ -1.69
VPS13D-214ENST00000620676 TYMSP04818 313 aa4.47□□□□□ -1.69
VPS13D-214ENST00000620676 M1APQ8TC57 530 aa4.47□□□□□ -1.69
VPS13D-214ENST00000620676 DIO2Q92813 273 aa4.47□□□□□ -1.69
VPS13D-214ENST00000620676 PECRQ9BY49 303 aa4.47□□□□□ -1.69
VPS13D-214ENST00000620676 IGHV2-70P01814 119 aa4.47□□□□□ -1.69
VPS13D-214ENST00000620676 FAM78AQ5JUQ0 283 aa4.47□□□□□ -1.69
VPS13D-214ENST00000620676 AGBL4Q5VU57 503 aa4.47□□□□□ -1.69
VPS13D-214ENST00000620676 SLC36A1Q7Z2H8 476 aa4.47□□□□□ -1.69
VPS13D-214ENST00000620676 SLC6A18Q96N87 628 aa4.47□□□□□ -1.69
VPS13D-214ENST00000620676 KCNE1BA0A087WTH5 132 aa4.47□□□□□ -1.69
VPS13D-214ENST00000620676 SLC17A2O00624 439 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms