RNA–Protein interactions for RNA: ENST00000618395.4

COL5A1-208, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL5A1, Length 8,437 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-208ENST00000618395 GLIPR2Q9H4G4 154 aa13.51□□□□□ -0.25
COL5A1-208ENST00000618395 TRBV11-1A0A0K0K1C0 115 aa13.51□□□□□ -0.25
COL5A1-208ENST00000618395 MUC1P15941 1255 aaPredicted RBP13.51□□□□□ -0.25
COL5A1-208ENST00000618395 COL8A1P27658 744 aa13.51□□□□□ -0.25
COL5A1-208ENST00000618395 MRPL58Q14197 206 aaKnown RBP13.51□□□□□ -0.25
COL5A1-208ENST00000618395 VHLLQ6RSH7 139 aa13.51□□□□□ -0.25
COL5A1-208ENST00000618395 OR51E1Q8TCB6 317 aa13.51□□□□□ -0.25
COL5A1-208ENST00000618395 MUCL1Q96DR8 90 aa13.51□□□□□ -0.25
COL5A1-208ENST00000618395 TIMP4Q99727 224 aa13.51□□□□□ -0.25
COL5A1-208ENST00000618395 CHST6Q9GZX3 395 aa13.51□□□□□ -0.25
COL5A1-208ENST00000618395 PLEKHB1Q9UF11 243 aaPredicted RBP13.51□□□□□ -0.25
COL5A1-208ENST00000618395 COA3Q9Y2R0 106 aaPredicted RBP13.51□□□□□ -0.25
COL5A1-208ENST00000618395 A6NCN8 305 aa13.51□□□□□ -0.25
COL5A1-208ENST00000618395 SRSF4Q08170 494 aaKnown RBP13.51□□□□□ -0.25
COL5A1-208ENST00000618395 IZUMO4Q1ZYL8 232 aa13.51□□□□□ -0.25
COL5A1-208ENST00000618395 Q6ZSR9 355 aa13.51□□□□□ -0.25
COL5A1-208ENST00000618395 PIMREGQ9BSJ6 248 aa13.51□□□□□ -0.25
COL5A1-208ENST00000618395 DYNLRB1Q9NP97 96 aa13.51□□□□□ -0.25
COL5A1-208ENST00000618395 HCRTO43612 131 aa13.51□□□□□ -0.25
COL5A1-208ENST00000618395 OPN1LWP04000 364 aa13.51□□□□□ -0.25
COL5A1-208ENST00000618395 LGALS4P56470 323 aa13.51□□□□□ -0.25
COL5A1-208ENST00000618395 TNFRSF9Q07011 255 aa13.51□□□□□ -0.25
COL5A1-208ENST00000618395 ADAMTS5Q9UNA0 930 aa13.51□□□□□ -0.25
COL5A1-208ENST00000618395 A0A0A6YYC8 382 aaPredicted RBP13.5□□□□□ -0.25
COL5A1-208ENST00000618395 I3L1I5 382 aaPredicted RBP13.5□□□□□ -0.25
COL5A1-208ENST00000618395 MORN1Q5T089 497 aa13.5□□□□□ -0.25
COL5A1-208ENST00000618395 ZNF785A8K8V0 405 aa13.5□□□□□ -0.25
COL5A1-208ENST00000618395 TAZQ16635 292 aa13.5□□□□□ -0.25
COL5A1-208ENST00000618395 RTL8AQ9BWD3 113 aa13.5□□□□□ -0.25
COL5A1-208ENST00000618395 SPHK2Q9NRA0 654 aa13.5□□□□□ -0.25
COL5A1-208ENST00000618395 RARRES3Q9UL19 164 aa13.5□□□□□ -0.25
COL5A1-208ENST00000618395 A0A1W2PP55 124 aa13.5□□□□□ -0.25
COL5A1-208ENST00000618395 M0R296 226 aa13.5□□□□□ -0.25
COL5A1-208ENST00000618395 ARSAP15289 507 aa13.5□□□□□ -0.25
COL5A1-208ENST00000618395 LDLRAD2Q5SZI1 272 aa13.5□□□□□ -0.25
COL5A1-208ENST00000618395 ZFAND6Q6FIF0 208 aa13.5□□□□□ -0.25
COL5A1-208ENST00000618395 CYB561D1Q8N8Q1 229 aa13.5□□□□□ -0.25
COL5A1-208ENST00000618395 TSACCQ96A04 125 aaPredicted RBP13.5□□□□□ -0.25
COL5A1-208ENST00000618395 C16orf70Q9BSU1 422 aa13.5□□□□□ -0.25
COL5A1-208ENST00000618395 MEGF9Q9H1U4 602 aa13.5□□□□□ -0.25
COL5A1-208ENST00000618395 KLF3P57682 345 aaPredicted RBP13.5□□□□□ -0.25
COL5A1-208ENST00000618395 BTG2P78543 158 aa13.5□□□□□ -0.25
COL5A1-208ENST00000618395 ASCL4Q6XD76 172 aa13.5□□□□□ -0.25
COL5A1-208ENST00000618395 TMEM179BQ7Z7N9 219 aa13.5□□□□□ -0.25
COL5A1-208ENST00000618395 TBC1D26Q86UD7 250 aa13.5□□□□□ -0.25
COL5A1-208ENST00000618395 RGP1Q92546 391 aaPredicted RBP13.5□□□□□ -0.25
COL5A1-208ENST00000618395 SPACA5Q96QH8 159 aa13.5□□□□□ -0.25
COL5A1-208ENST00000618395 ZNF407Q9C0G0 2248 aa13.5□□□□□ -0.25
COL5A1-208ENST00000618395 MPTX1A8MV57 137 aa13.5□□□□□ -0.25
COL5A1-208ENST00000618395 TNFSF11O14788 317 aa13.5□□□□□ -0.25
COL5A1-208ENST00000618395 CTDSPLO15194 276 aa13.5□□□□□ -0.25
COL5A1-208ENST00000618395 RER1O15258 196 aa13.5□□□□□ -0.25
COL5A1-208ENST00000618395 C21orf58P58505 322 aa13.5□□□□□ -0.25
COL5A1-208ENST00000618395 PYCR3Q53H96 274 aa13.5□□□□□ -0.25
COL5A1-208ENST00000618395 LBX2Q6XYB7 198 aa13.5□□□□□ -0.25
COL5A1-208ENST00000618395 CDC14CA4D256 554 aa13.5□□□□□ -0.25
COL5A1-208ENST00000618395 MT-CO3P00414 261 aa13.5□□□□□ -0.25
COL5A1-208ENST00000618395 PIK3IP1Q96FE7 263 aa13.5□□□□□ -0.25
COL5A1-208ENST00000618395 GMPPAQ96IJ6 420 aaPredicted RBP13.5□□□□□ -0.25
COL5A1-208ENST00000618395 SELEP16581 610 aa13.49□□□□□ -0.25
COL5A1-208ENST00000618395 YRDCQ86U90 279 aaKnown RBP13.49□□□□□ -0.25
COL5A1-208ENST00000618395 SLAMF6Q96DU3 332 aa13.49□□□□□ -0.25
COL5A1-208ENST00000618395 NRIP2Q9BQI9 281 aa13.49□□□□□ -0.25
COL5A1-208ENST00000618395 LOC389332A0A1B0GUA5 103 aa13.49□□□□□ -0.25
COL5A1-208ENST00000618395 PLPP2O43688 288 aa13.49□□□□□ -0.25
COL5A1-208ENST00000618395 EIF1P41567 113 aaKnown RBP13.49□□□□□ -0.25
COL5A1-208ENST00000618395 ANKRD55Q3KP44 614 aa13.49□□□□□ -0.25
COL5A1-208ENST00000618395 H1FNTQ75WM6 255 aaPredicted RBP13.49□□□□□ -0.25
COL5A1-208ENST00000618395 TAS1R1Q7RTX1 841 aa13.49□□□□□ -0.25
COL5A1-208ENST00000618395 ZDHHC8Q9ULC8 765 aa13.49□□□□□ -0.25
COL5A1-208ENST00000618395 ERVH48-1M5A8F1 160 aa13.49□□□□□ -0.25
COL5A1-208ENST00000618395 SRSF10O75494 262 aaKnown RBP13.49□□□□□ -0.25
COL5A1-208ENST00000618395 DEFB110Q30KQ9 67 aa13.49□□□□□ -0.25
COL5A1-208ENST00000618395 AAED1Q7RTV5 226 aa13.49□□□□□ -0.25
COL5A1-208ENST00000618395 OR8I2Q8N0Y5 310 aa13.49□□□□□ -0.25
COL5A1-208ENST00000618395 TMED7-TICAM2A0A0A6YYA0 188 aa13.49□□□□□ -0.25
COL5A1-208ENST00000618395 ANKRD20A5PA0PJZ0 165 aa13.49□□□□□ -0.25
COL5A1-208ENST00000618395 PITX1P78337 314 aaPredicted RBP13.49□□□□□ -0.25
COL5A1-208ENST00000618395 SMAGPQ0VAQ4 97 aa13.49□□□□□ -0.25
COL5A1-208ENST00000618395 PRTGQ2VWP7 1150 aa13.49□□□□□ -0.25
COL5A1-208ENST00000618395 GHITMQ9H3K2 345 aa13.49□□□□□ -0.25
COL5A1-208ENST00000618395 ELOVL5Q9NYP7 299 aa13.49□□□□□ -0.25
COL5A1-208ENST00000618395 IL17CQ9P0M4 197 aa13.49□□□□□ -0.25
COL5A1-208ENST00000618395 TMED7Q9Y3B3 224 aa13.49□□□□□ -0.25
COL5A1-208ENST00000618395 TDRD15B5MCY1 1934 aaKnown RBP13.49□□□□□ -0.25
COL5A1-208ENST00000618395 ZFAND5O76080 213 aa13.49□□□□□ -0.25
COL5A1-208ENST00000618395 CST9Q5W186 159 aa13.49□□□□□ -0.25
COL5A1-208ENST00000618395 CTU1Q7Z7A3 348 aaKnown RBP13.49□□□□□ -0.25
COL5A1-208ENST00000618395 SPANXA1Q9NS26 97 aa13.49□□□□□ -0.25
COL5A1-208ENST00000618395 CLDND1Q9NY35 253 aa13.49□□□□□ -0.25
COL5A1-208ENST00000618395 LDLRAD3Q86YD5 345 aa13.49□□□□□ -0.25
COL5A1-208ENST00000618395 OSR2Q8N2R0 312 aa13.49□□□□□ -0.25
COL5A1-208ENST00000618395 MRPS16Q9Y3D3 137 aaKnown RBP13.49□□□□□ -0.25
COL5A1-208ENST00000618395 NALCNQ8IZF0 1738 aa13.49□□□□□ -0.25
COL5A1-208ENST00000618395 BCL9LQ86UU0 1499 aa13.48□□□□□ -0.25
COL5A1-208ENST00000618395 FAM221AA4D161 298 aa13.48□□□□□ -0.25
COL5A1-208ENST00000618395 HLA-DQA1P01909 254 aa13.48□□□□□ -0.25
COL5A1-208ENST00000618395 CYBAP13498 195 aa13.48□□□□□ -0.25
COL5A1-208ENST00000618395 OPRK1P41145 380 aa13.48□□□□□ -0.25
COL5A1-208ENST00000618395 MUC15Q8N387 334 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms