RNA–Protein interactions for RNA: ENST00000618081.4

CCDC144B-208, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

TSL 1 (best) BASIC

Gene CCDC144B, Length 8,688 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-208ENST00000618081 PSG11Q9UQ72 335 aa9.97□□□□□ -0.81
CCDC144B-208ENST00000618081 OR2T8A6NH00 312 aa9.97□□□□□ -0.81
CCDC144B-208ENST00000618081 TUBAL3A6NHL2 446 aa9.97□□□□□ -0.81
CCDC144B-208ENST00000618081 PCMT1P22061 227 aa9.97□□□□□ -0.81
CCDC144B-208ENST00000618081 ANKRD34AQ69YU3 496 aa9.97□□□□□ -0.81
CCDC144B-208ENST00000618081 RND1Q92730 232 aa9.97□□□□□ -0.81
CCDC144B-208ENST00000618081 MCHR2Q969V1 340 aa9.97□□□□□ -0.81
CCDC144B-208ENST00000618081 ING1Q9UK53 422 aaPredicted RBP9.97□□□□□ -0.81
CCDC144B-208ENST00000618081 KLK8O60259 260 aa9.97□□□□□ -0.81
CCDC144B-208ENST00000618081 NEURL1O76050 574 aa9.97□□□□□ -0.81
CCDC144B-208ENST00000618081 IGLV3-25P01717 112 aa9.97□□□□□ -0.81
CCDC144B-208ENST00000618081 GYPAP02724 150 aa9.97□□□□□ -0.81
CCDC144B-208ENST00000618081 TGIF2LXQ8IUE1 241 aa9.97□□□□□ -0.81
CCDC144B-208ENST00000618081 CST7O76096 145 aa9.97□□□□□ -0.81
CCDC144B-208ENST00000618081 GCSHP23434 173 aa9.97□□□□□ -0.81
CCDC144B-208ENST00000618081 COX7A1P24310 79 aa9.97□□□□□ -0.81
CCDC144B-208ENST00000618081 CD82P27701 267 aa9.97□□□□□ -0.81
CCDC144B-208ENST00000618081 RNASEKQ6P5S7 137 aaKnown RBP9.97□□□□□ -0.81
CCDC144B-208ENST00000618081 VWA1Q6PCB0 445 aa9.97□□□□□ -0.81
CCDC144B-208ENST00000618081 SSX8Q7RTT4 187 aa9.97□□□□□ -0.81
CCDC144B-208ENST00000618081 OCEL1Q9H607 264 aa9.97□□□□□ -0.81
CCDC144B-208ENST00000618081 SLC7A10Q9NS82 523 aa9.97□□□□□ -0.81
CCDC144B-208ENST00000618081 SLC25A37Q9NYZ2 338 aa9.97□□□□□ -0.81
CCDC144B-208ENST00000618081 TBX21Q9UL17 535 aa9.97□□□□□ -0.81
CCDC144B-208ENST00000618081 ADAM20O43506 726 aa9.97□□□□□ -0.81
CCDC144B-208ENST00000618081 GP1BAP07359 652 aa9.97□□□□□ -0.81
CCDC144B-208ENST00000618081 Q3ZCU0 254 aa9.97□□□□□ -0.81
CCDC144B-208ENST00000618081 ANKRD37Q7Z713 158 aa9.97□□□□□ -0.81
CCDC144B-208ENST00000618081 SAP30LQ9HAJ7 183 aa9.97□□□□□ -0.81
CCDC144B-208ENST00000618081 ZNF831Q5JPB2 1677 aa9.97□□□□□ -0.81
CCDC144B-208ENST00000618081 PRSS36Q5K4E3 855 aa9.97□□□□□ -0.81
CCDC144B-208ENST00000618081 RNF2Q99496 336 aa9.97□□□□□ -0.81
CCDC144B-208ENST00000618081 MMP26Q9NRE1 261 aa9.97□□□□□ -0.81
CCDC144B-208ENST00000618081 DEFB108AA8MXU0 73 aa9.96□□□□□ -0.81
CCDC144B-208ENST00000618081 C3orf80F5H4A9 247 aa9.96□□□□□ -0.81
CCDC144B-208ENST00000618081 OR4A8P0C604 315 aa9.96□□□□□ -0.81
CCDC144B-208ENST00000618081 HERVK_113P61574 105 aa9.96□□□□□ -0.81
CCDC144B-208ENST00000618081 SLC38A11Q08AI6 406 aa9.96□□□□□ -0.81
CCDC144B-208ENST00000618081 AGERQ15109 404 aa9.96□□□□□ -0.81
CCDC144B-208ENST00000618081 CXCL16Q9H2A7 254 aa9.96□□□□□ -0.81
CCDC144B-208ENST00000618081 C20orf141Q9NUB4 165 aa9.96□□□□□ -0.81
CCDC144B-208ENST00000618081 ZMAT5Q9UDW3 170 aaKnown RBP9.96□□□□□ -0.81
CCDC144B-208ENST00000618081 TRBV5-4A0A0C4DH59 114 aa9.96□□□□□ -0.81
CCDC144B-208ENST00000618081 OR5AL1P0C617 328 aa9.96□□□□□ -0.81
CCDC144B-208ENST00000618081 MIDNQ504T8 468 aa9.96□□□□□ -0.81
CCDC144B-208ENST00000618081 SLC25A30Q5SVS4 291 aa9.96□□□□□ -0.81
CCDC144B-208ENST00000618081 SLC26A10Q8NG04 563 aa9.96□□□□□ -0.81
CCDC144B-208ENST00000618081 SMIM4Q8WVI0 70 aa9.96□□□□□ -0.81
CCDC144B-208ENST00000618081 RNF167Q9H6Y7 350 aa9.96□□□□□ -0.81
CCDC144B-208ENST00000618081 SLC25A22Q9H936 323 aa9.96□□□□□ -0.81
CCDC144B-208ENST00000618081 ZNF71Q9NQZ8 489 aaPredicted RBP9.96□□□□□ -0.81
CCDC144B-208ENST00000618081 SEMA7AO75326 666 aa9.96□□□□□ -0.81
CCDC144B-208ENST00000618081 PTBP3O95758 552 aaKnown RBP9.96□□□□□ -0.81
CCDC144B-208ENST00000618081 EPPINO95925 133 aa9.96□□□□□ -0.81
CCDC144B-208ENST00000618081 DCTDP32321 178 aa9.96□□□□□ -0.81
CCDC144B-208ENST00000618081 PCBP3P57721 371 aaKnown RBP9.96□□□□□ -0.81
CCDC144B-208ENST00000618081 LYZP61626 148 aa9.96□□□□□ -0.81
CCDC144B-208ENST00000618081 TMEM183BQ1AE95 376 aa9.96□□□□□ -0.81
CCDC144B-208ENST00000618081 WDR73Q6P4I2 378 aa9.96□□□□□ -0.81
CCDC144B-208ENST00000618081 MYPOPQ86VE0 399 aaPredicted RBP9.96□□□□□ -0.81
CCDC144B-208ENST00000618081 OOEPA6NGQ2 149 aa9.96□□□□□ -0.81
CCDC144B-208ENST00000618081 GPX5O75715 221 aa9.96□□□□□ -0.81
CCDC144B-208ENST00000618081 PMCHP20382 165 aa9.96□□□□□ -0.81
CCDC144B-208ENST00000618081 HES3Q5TGS1 186 aa9.96□□□□□ -0.81
CCDC144B-208ENST00000618081 ZNF429Q86V71 674 aa9.96□□□□□ -0.81
CCDC144B-208ENST00000618081 PERPQ96FX8 193 aa9.96□□□□□ -0.81
CCDC144B-208ENST00000618081 ZFP64Q9NPA5 681 aa9.96□□□□□ -0.81
CCDC144B-208ENST00000618081 WSB2Q9NYS7 404 aaPredicted RBP9.96□□□□□ -0.81
CCDC144B-208ENST00000618081 NAT8BQ9UHF3 227 aa9.96□□□□□ -0.81
CCDC144B-208ENST00000618081 HOXC4P09017 264 aaPredicted RBP9.96□□□□□ -0.82
CCDC144B-208ENST00000618081 MMP7P09237 267 aaPredicted RBP9.96□□□□□ -0.82
CCDC144B-208ENST00000618081 SMIM12Q96EX1 92 aa9.96□□□□□ -0.82
CCDC144B-208ENST00000618081 KCNK15Q9H427 330 aa9.96□□□□□ -0.82
CCDC144B-208ENST00000618081 PRKNO60260 465 aaPredicted RBP9.96□□□□□ -0.82
CCDC144B-208ENST00000618081 PSMB2P49721 201 aa9.96□□□□□ -0.82
CCDC144B-208ENST00000618081 C11orf87Q6NUJ2 197 aa9.96□□□□□ -0.82
CCDC144B-208ENST00000618081 GABRG3Q99928 467 aa9.96□□□□□ -0.82
CCDC144B-208ENST00000618081 MANBALQ9NQG1 85 aa9.96□□□□□ -0.82
CCDC144B-208ENST00000618081 ERRFI1Q9UJM3 462 aaPredicted RBP9.96□□□□□ -0.82
CCDC144B-208ENST00000618081 GTF3C1Q12789 2109 aa9.96□□□□□ -0.82
CCDC144B-208ENST00000618081 CRISP2P16562 243 aa9.96□□□□□ -0.82
CCDC144B-208ENST00000618081 MRGPREQ86SM8 312 aa9.96□□□□□ -0.82
CCDC144B-208ENST00000618081 OR4A4PQ8NGN8 299 aa9.96□□□□□ -0.82
CCDC144B-208ENST00000618081 SRD5A2P31213 254 aa9.95□□□□□ -0.82
CCDC144B-208ENST00000618081 TGIF2LYQ8IUE0 185 aa9.95□□□□□ -0.82
CCDC144B-208ENST00000618081 DERL3Q96Q80 235 aa9.95□□□□□ -0.82
CCDC144B-208ENST00000618081 LPAR3Q9UBY5 353 aa9.95□□□□□ -0.82
CCDC144B-208ENST00000618081 PRSS44E7EML9 344 aa9.95□□□□□ -0.82
CCDC144B-208ENST00000618081 BMPR1BO00238 502 aa9.95□□□□□ -0.82
CCDC144B-208ENST00000618081 MYF5P13349 255 aa9.95□□□□□ -0.82
CCDC144B-208ENST00000618081 SLC16A12Q6ZSM3 486 aa9.95□□□□□ -0.82
CCDC144B-208ENST00000618081 LRRC29Q8WV35 223 aa9.95□□□□□ -0.82
CCDC144B-208ENST00000618081 PLSCR3Q9NRY6 295 aa9.95□□□□□ -0.82
CCDC144B-208ENST00000618081 ETHE1O95571 254 aa9.95□□□□□ -0.82
CCDC144B-208ENST00000618081 IZUMO4Q1ZYL8 232 aa9.95□□□□□ -0.82
CCDC144B-208ENST00000618081 OR4D10Q8NGI6 311 aa9.95□□□□□ -0.82
CCDC144B-208ENST00000618081 WDR89Q96FK6 387 aaPredicted RBP9.95□□□□□ -0.82
CCDC144B-208ENST00000618081 MASP2O00187 686 aa9.95□□□□□ -0.82
CCDC144B-208ENST00000618081 HIST1H1EP10412 219 aaKnown RBP9.95□□□□□ -0.82
CCDC144B-208ENST00000618081 ORM2P19652 201 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms