RNA–Protein interactions for RNA: ENST00000616154.1

CDX1-202, Transcript of caudal type homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CDX1, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1-202ENST00000616154 OR14K1Q8NGZ2 314 aa15.53■□□□□ 0.08
CDX1-202ENST00000616154 MYCBPQ99417 103 aaPredicted RBP15.53■□□□□ 0.08
CDX1-202ENST00000616154 TBX5Q99593 518 aa15.53■□□□□ 0.08
CDX1-202ENST00000616154 ALG8Q9BVK2 526 aa15.53■□□□□ 0.08
CDX1-202ENST00000616154 TCF7L1Q9HCS4 588 aa15.53■□□□□ 0.08
CDX1-202ENST00000616154 PIGLQ9Y2B2 252 aa15.53■□□□□ 0.08
CDX1-202ENST00000616154 LSM2Q9Y333 95 aaKnown RBP15.53■□□□□ 0.08
CDX1-202ENST00000616154 BTBD17A6NE02 478 aa15.52■□□□□ 0.08
CDX1-202ENST00000616154 METTL15A6NJ78 407 aa15.52■□□□□ 0.08
CDX1-202ENST00000616154 ZNF732B4DXR9 585 aa15.52■□□□□ 0.08
CDX1-202ENST00000616154 NPFFO15130 113 aa15.52■□□□□ 0.08
CDX1-202ENST00000616154 SMIM18P0DKX4 95 aa15.52■□□□□ 0.08
CDX1-202ENST00000616154 CLVS2Q5SYC1 327 aa15.52■□□□□ 0.08
CDX1-202ENST00000616154 ZNF788Q6ZQV5 615 aa15.52■□□□□ 0.08
CDX1-202ENST00000616154 PLEKHG7Q6ZR37 379 aa15.52■□□□□ 0.08
CDX1-202ENST00000616154 KCTD20Q7Z5Y7 419 aa15.52■□□□□ 0.08
CDX1-202ENST00000616154 COMMD2Q86X83 199 aa15.52■□□□□ 0.08
CDX1-202ENST00000616154 TSPAN14Q8NG11 270 aa15.52■□□□□ 0.08
CDX1-202ENST00000616154 ANGPTL6Q8NI99 470 aa15.52■□□□□ 0.08
CDX1-202ENST00000616154 AQP3Q92482 292 aa15.52■□□□□ 0.08
CDX1-202ENST00000616154 RORBQ92753 470 aa15.52■□□□□ 0.08
CDX1-202ENST00000616154 RNF166Q96A37 237 aaPredicted RBP15.52■□□□□ 0.08
CDX1-202ENST00000616154 MRPL48Q96GC5 212 aaKnown RBP15.52■□□□□ 0.08
CDX1-202ENST00000616154 WDR13Q9H1Z4 485 aa15.52■□□□□ 0.08
CDX1-202ENST00000616154 DNAJB11Q9UBS4 358 aa15.52■□□□□ 0.08
CDX1-202ENST00000616154 A0A087WXM4 84 aa15.51■□□□□ 0.07
CDX1-202ENST00000616154 MAGEA13PA6NCF6 341 aa15.51■□□□□ 0.07
CDX1-202ENST00000616154 NKX6-3A6NJ46 265 aa15.51■□□□□ 0.07
CDX1-202ENST00000616154 TSPAN9O75954 239 aa15.51■□□□□ 0.07
CDX1-202ENST00000616154 NRASP01111 189 aa15.51■□□□□ 0.07
CDX1-202ENST00000616154 SELLP14151 372 aa15.51■□□□□ 0.07
CDX1-202ENST00000616154 CEP78Q5JTW2 689 aa15.51■□□□□ 0.07
CDX1-202ENST00000616154 C1orf122Q6ZSJ8 110 aa15.51■□□□□ 0.07
CDX1-202ENST00000616154 KCTD8Q6ZWB6 473 aa15.51■□□□□ 0.07
CDX1-202ENST00000616154 CCDC54Q8NEL0 328 aa15.51■□□□□ 0.07
CDX1-202ENST00000616154 OR5T2Q8NGG2 359 aa15.51■□□□□ 0.07
CDX1-202ENST00000616154 TNFRSF14Q92956 283 aa15.51■□□□□ 0.07
CDX1-202ENST00000616154 SLC22A13Q9Y226 551 aa15.51■□□□□ 0.07
CDX1-202ENST00000616154 A0A0G2JK05 382 aa15.5■□□□□ 0.07
CDX1-202ENST00000616154 AKR7A2O43488 359 aa15.5■□□□□ 0.07
CDX1-202ENST00000616154 NOS1APO75052 506 aaPredicted RBP15.5■□□□□ 0.07
CDX1-202ENST00000616154 RHBDL1O75783 438 aa15.5■□□□□ 0.07
CDX1-202ENST00000616154 PRB3Q04118 309 aaPredicted RBP15.5■□□□□ 0.07
CDX1-202ENST00000616154 EMX1Q04741 257 aaPredicted RBP15.5■□□□□ 0.07
CDX1-202ENST00000616154 DOC2BQ14184 412 aa15.5■□□□□ 0.07
CDX1-202ENST00000616154 PLCXD3Q63HM9 321 aa15.5■□□□□ 0.07
CDX1-202ENST00000616154 SVOPQ8N4V2 548 aa15.5■□□□□ 0.07
CDX1-202ENST00000616154 YIPF7Q8N8F6 280 aa15.5■□□□□ 0.07
CDX1-202ENST00000616154 OR5R1Q8NH85 324 aa15.5■□□□□ 0.07
CDX1-202ENST00000616154 H1FXQ92522 213 aaKnown RBP15.5■□□□□ 0.07
CDX1-202ENST00000616154 MED30Q96HR3 178 aa15.5■□□□□ 0.07
CDX1-202ENST00000616154 GAFA1Q96PS6 74 aa15.5■□□□□ 0.07
CDX1-202ENST00000616154 MND1Q9BWT6 205 aa15.5■□□□□ 0.07
CDX1-202ENST00000616154 ACOT13Q9NPJ3 140 aa15.5■□□□□ 0.07
CDX1-202ENST00000616154 SNTG1Q9NSN8 517 aa15.5■□□□□ 0.07
CDX1-202ENST00000616154 CHCHD3Q9NX63 227 aaKnown RBP15.5■□□□□ 0.07
CDX1-202ENST00000616154 NLKQ9UBE8 527 aa15.5■□□□□ 0.07
CDX1-202ENST00000616154 ZNF222Q9UK12 451 aa15.5■□□□□ 0.07
CDX1-202ENST00000616154 ERGIC3Q9Y282 383 aa15.5■□□□□ 0.07
CDX1-202ENST00000616154 TET2Q6N021 2002 aaPredicted RBP15.5■□□□□ 0.07
CDX1-202ENST00000616154 PQLC2LA1A4F0 135 aa15.49■□□□□ 0.07
CDX1-202ENST00000616154 M0R1W7 72 aa15.49■□□□□ 0.07
CDX1-202ENST00000616154 SIGLEC5O15389 551 aa15.49■□□□□ 0.07
CDX1-202ENST00000616154 TSPAN15O95858 294 aa15.49■□□□□ 0.07
CDX1-202ENST00000616154 ACAA1P09110 424 aaPredicted RBP15.49■□□□□ 0.07
CDX1-202ENST00000616154 MPZP25189 248 aa15.49■□□□□ 0.07
CDX1-202ENST00000616154 TGFBR2P37173 567 aa15.49■□□□□ 0.07
CDX1-202ENST00000616154 DLX1P56177 255 aa15.49■□□□□ 0.07
CDX1-202ENST00000616154 OR12D2P58182 307 aa15.49■□□□□ 0.07
CDX1-202ENST00000616154 GMFBP60983 142 aa15.49■□□□□ 0.07
CDX1-202ENST00000616154 ACSM1Q08AH1 577 aa15.49■□□□□ 0.07
CDX1-202ENST00000616154 KLRD1Q13241 179 aa15.49■□□□□ 0.07
CDX1-202ENST00000616154 DGUOKQ16854 277 aa15.49■□□□□ 0.07
CDX1-202ENST00000616154 OR2G6Q5TZ20 316 aa15.49■□□□□ 0.07
CDX1-202ENST00000616154 UBE2UQ5VVX9 321 aa15.49■□□□□ 0.07
CDX1-202ENST00000616154 NCR3LG1Q68D85 454 aa15.49■□□□□ 0.07
CDX1-202ENST00000616154 XAF1Q6GPH4 301 aa15.49■□□□□ 0.07
CDX1-202ENST00000616154 FDX2Q6P4F2 183 aa15.49■□□□□ 0.07
CDX1-202ENST00000616154 TMPRSS11AQ6ZMR5 421 aa15.49■□□□□ 0.07
CDX1-202ENST00000616154 MOB3CQ70IA8 216 aa15.49■□□□□ 0.07
CDX1-202ENST00000616154 ZNF671Q8TAW3 534 aa15.49■□□□□ 0.07
CDX1-202ENST00000616154 RPS4Y2Q8TD47 263 aa15.49■□□□□ 0.07
CDX1-202ENST00000616154 HAVCR2Q8TDQ0 301 aa15.49■□□□□ 0.07
CDX1-202ENST00000616154 PELI1Q96FA3 418 aa15.49■□□□□ 0.07
CDX1-202ENST00000616154 C4orf36Q96KX1 117 aa15.49■□□□□ 0.07
CDX1-202ENST00000616154 CCDC90BQ9GZT6 254 aa15.49■□□□□ 0.07
CDX1-202ENST00000616154 ISG20L2Q9H9L3 353 aaKnown RBP15.49■□□□□ 0.07
CDX1-202ENST00000616154 RASL12Q9NYN1 266 aa15.49■□□□□ 0.07
CDX1-202ENST00000616154 SLC25A10Q9UBX3 287 aaPredicted RBP15.49■□□□□ 0.07
CDX1-202ENST00000616154 GTF2A1LQ9UNN4 478 aa15.49■□□□□ 0.07
CDX1-202ENST00000616154 A0A1W2PRD5 423 aa15.48■□□□□ 0.07
CDX1-202ENST00000616154 A0A1W2PRF3 423 aa15.48■□□□□ 0.07
CDX1-202ENST00000616154 A0A1W2PRM7 423 aa15.48■□□□□ 0.07
CDX1-202ENST00000616154 OR2AT4A6NND4 320 aa15.48■□□□□ 0.07
CDX1-202ENST00000616154 J3QT63 122 aa15.48■□□□□ 0.07
CDX1-202ENST00000616154 MYL12BO14950 172 aa15.48■□□□□ 0.07
CDX1-202ENST00000616154 RPP14O95059 124 aaKnown RBP15.48■□□□□ 0.07
CDX1-202ENST00000616154 PAHP00439 452 aa15.48■□□□□ 0.07
CDX1-202ENST00000616154 SAA4P35542 130 aa15.48■□□□□ 0.07
CDX1-202ENST00000616154 UBE2E1P51965 193 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms