RNA–Protein interactions for RNA: ENST00000615671.1

GABPB1-212, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

Gene GABPB1, Length 6,266 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-212ENST00000615671 ITGB4P16144 1822 aa16.59■□□□□ 0.25
GABPB1-212ENST00000615671 PLPP3O14495 311 aa16.59■□□□□ 0.25
GABPB1-212ENST00000615671 ACSM4P0C7M7 580 aa16.59■□□□□ 0.25
GABPB1-212ENST00000615671 RAB7AP51149 207 aa16.59■□□□□ 0.25
GABPB1-212ENST00000615671 ABHD3Q8WU67 409 aa16.59■□□□□ 0.25
GABPB1-212ENST00000615671 A0A1W2PPE3 182 aa16.59■□□□□ 0.25
GABPB1-212ENST00000615671 JUNBP17275 347 aaPredicted RBP16.59■□□□□ 0.25
GABPB1-212ENST00000615671 ZNF574Q6ZN55 896 aaPredicted RBP16.59■□□□□ 0.25
GABPB1-212ENST00000615671 CADM3Q8N126 398 aa16.59■□□□□ 0.25
GABPB1-212ENST00000615671 A0A1W2PN81 502 aa16.59■□□□□ 0.25
GABPB1-212ENST00000615671 ARG1P05089 322 aa16.59■□□□□ 0.25
GABPB1-212ENST00000615671 SPNP16150 400 aa16.59■□□□□ 0.25
GABPB1-212ENST00000615671 CHRNA7P36544 502 aa16.59■□□□□ 0.25
GABPB1-212ENST00000615671 SLC25A30Q5SVS4 291 aa16.59■□□□□ 0.25
GABPB1-212ENST00000615671 RIMKLAQ8IXN7 391 aa16.59■□□□□ 0.25
GABPB1-212ENST00000615671 TINAGQ9UJW2 476 aa16.59■□□□□ 0.25
GABPB1-212ENST00000615671 CD1BP29016 333 aa16.58■□□□□ 0.25
GABPB1-212ENST00000615671 EVX1P49640 407 aa16.58■□□□□ 0.25
GABPB1-212ENST00000615671 NHLH1Q02575 133 aa16.58■□□□□ 0.25
GABPB1-212ENST00000615671 NHLH2Q02577 135 aa16.58■□□□□ 0.25
GABPB1-212ENST00000615671 IGFBP7Q16270 282 aa16.58■□□□□ 0.25
GABPB1-212ENST00000615671 DGAT2L7PQ6IED9 249 aa16.58■□□□□ 0.25
GABPB1-212ENST00000615671 IGHV5-10-1A0A0J9YXX1 117 aa16.58■□□□□ 0.25
GABPB1-212ENST00000615671 ASAH1Q13510 395 aa16.58■□□□□ 0.25
GABPB1-212ENST00000615671 ETV3LQ6ZN32 361 aa16.58■□□□□ 0.25
GABPB1-212ENST00000615671 AMDHD2Q9Y303 409 aa16.58■□□□□ 0.25
GABPB1-212ENST00000615671 ADRB1P08588 477 aa16.58■□□□□ 0.24
GABPB1-212ENST00000615671 COX6B1P14854 86 aa16.58■□□□□ 0.24
GABPB1-212ENST00000615671 SRD5A2P31213 254 aa16.58■□□□□ 0.24
GABPB1-212ENST00000615671 BAK1Q16611 211 aa16.58■□□□□ 0.24
GABPB1-212ENST00000615671 LSM11P83369 360 aaKnown RBP eCLIP16.58■□□□□ 0.24
GABPB1-212ENST00000615671 HSPB2A8KAH6 182 aa16.58■□□□□ 0.24
GABPB1-212ENST00000615671 RNASEK-C17orf49H0YIS7 233 aa16.58■□□□□ 0.24
GABPB1-212ENST00000615671 OR5AL1P0C617 328 aa16.58■□□□□ 0.24
GABPB1-212ENST00000615671 PTBP1P26599 531 aaKnown RBP eCLIP16.58■□□□□ 0.242e-8■■■■□ 24.2
GABPB1-212ENST00000615671 SELENOPP49908 381 aa16.58■□□□□ 0.24
GABPB1-212ENST00000615671 GNG4P50150 75 aa16.58■□□□□ 0.24
GABPB1-212ENST00000615671 HSPB2Q16082 182 aa16.58■□□□□ 0.24
GABPB1-212ENST00000615671 SPSB1Q96BD6 273 aa16.58■□□□□ 0.24
GABPB1-212ENST00000615671 IGHV3OR16-12A0A075B7B8 117 aa16.57■□□□□ 0.24
GABPB1-212ENST00000615671 ICMTO60725 284 aa16.57■□□□□ 0.24
GABPB1-212ENST00000615671 RPL34P49207 117 aaKnown RBP16.57■□□□□ 0.24
GABPB1-212ENST00000615671 WASHC3Q9Y3C0 194 aa16.57■□□□□ 0.24
GABPB1-212ENST00000615671 TRAV39A0A0B4J263 110 aa16.57■□□□□ 0.24
GABPB1-212ENST00000615671 GABRA1P14867 456 aa16.57■□□□□ 0.24
GABPB1-212ENST00000615671 CDKN2AP42771 156 aaKnown RBP16.57■□□□□ 0.24
GABPB1-212ENST00000615671 ZNF141Q15928 474 aa16.57■□□□□ 0.24
GABPB1-212ENST00000615671 MOGAT1Q96PD6 335 aa16.57■□□□□ 0.24
GABPB1-212ENST00000615671 YTHDF2Q9Y5A9 579 aaKnown RBP16.57■□□□□ 0.24
GABPB1-212ENST00000615671 FAM24AA6NFZ4 105 aa16.57■□□□□ 0.24
GABPB1-212ENST00000615671 KIAA1324LA8MWY0 1029 aaPredicted RBP16.57■□□□□ 0.24
GABPB1-212ENST00000615671 TOX3O15405 576 aaPredicted RBP16.57■□□□□ 0.24
GABPB1-212ENST00000615671 CSN3P07498 182 aa16.57■□□□□ 0.24
GABPB1-212ENST00000615671 CD1EP15812 388 aa16.57■□□□□ 0.24
GABPB1-212ENST00000615671 CAMPP49913 170 aa16.57■□□□□ 0.24
GABPB1-212ENST00000615671 MIDNQ504T8 468 aa16.57■□□□□ 0.24
GABPB1-212ENST00000615671 MS4A7Q9GZW8 240 aaPredicted RBP16.57■□□□□ 0.24
GABPB1-212ENST00000615671 IGHA1P01876 353 aa16.57■□□□□ 0.24
GABPB1-212ENST00000615671 IGHA2P01877 340 aa16.57■□□□□ 0.24
GABPB1-212ENST00000615671 C1QBP02746 253 aa16.57■□□□□ 0.24
GABPB1-212ENST00000615671 RAB5AP20339 215 aa16.57■□□□□ 0.24
GABPB1-212ENST00000615671 GVQW1Q8N7I0 195 aa16.57■□□□□ 0.24
GABPB1-212ENST00000615671 ZNF441Q8N8Z8 693 aa16.57■□□□□ 0.24
GABPB1-212ENST00000615671 PRRC2BQ5JSZ5 2229 aaKnown RBP16.57■□□□□ 0.24
GABPB1-212ENST00000615671 CDIPTO14735 213 aa16.57■□□□□ 0.24
GABPB1-212ENST00000615671 PJVKQ0ZLH3 352 aa16.57■□□□□ 0.24
GABPB1-212ENST00000615671 ZNF429Q86V71 674 aa16.57■□□□□ 0.24
GABPB1-212ENST00000615671 CNTD2Q9H8S5 307 aa16.57■□□□□ 0.24
GABPB1-212ENST00000615671 TRIM77I1YAP6 450 aa16.56■□□□□ 0.24
GABPB1-212ENST00000615671 HTR1DP28221 377 aa16.56■□□□□ 0.24
GABPB1-212ENST00000615671 HOXA4Q00056 320 aaPredicted RBP16.56■□□□□ 0.24
GABPB1-212ENST00000615671 NSUN5P2Q63ZY6 315 aa16.56■□□□□ 0.24
GABPB1-212ENST00000615671 OR2M3Q8NG83 312 aa16.56■□□□□ 0.24
GABPB1-212ENST00000615671 SIGLEC7Q9Y286 467 aa16.56■□□□□ 0.24
GABPB1-212ENST00000615671 OR5AC1P0C628 307 aa16.56■□□□□ 0.24
GABPB1-212ENST00000615671 BRS3P32247 399 aa16.56■□□□□ 0.24
GABPB1-212ENST00000615671 ZNF596Q8TC21 504 aa16.56■□□□□ 0.24
GABPB1-212ENST00000615671 ASCL3Q9NQ33 180 aa16.56■□□□□ 0.24
GABPB1-212ENST00000615671 TTC3P53804 2025 aa16.56■□□□□ 0.24
GABPB1-212ENST00000615671 SLC17A2O00624 439 aa16.56■□□□□ 0.24
GABPB1-212ENST00000615671 CCL3P10147 92 aa16.56■□□□□ 0.24
GABPB1-212ENST00000615671 PCED1AQ9H1Q7 454 aa16.56■□□□□ 0.24
GABPB1-212ENST00000615671 CTNNBIP1Q9NSA3 81 aaPredicted RBP16.56■□□□□ 0.24
GABPB1-212ENST00000615671 THYN1Q9P016 225 aa16.56■□□□□ 0.24
GABPB1-212ENST00000615671 HIST1H1DP16402 221 aaKnown RBP16.56■□□□□ 0.24
GABPB1-212ENST00000615671 DRD3P35462 400 aa16.56■□□□□ 0.24
GABPB1-212ENST00000615671 TMEM97Q5BJF2 176 aa16.56■□□□□ 0.24
GABPB1-212ENST00000615671 TMEM128Q5BJH2 165 aa16.56■□□□□ 0.24
GABPB1-212ENST00000615671 TSPO2Q5TGU0 170 aa16.56■□□□□ 0.24
GABPB1-212ENST00000615671 OR5C1Q8NGR4 320 aa16.56■□□□□ 0.24
GABPB1-212ENST00000615671 VSTM2LQ96N03 204 aa16.56■□□□□ 0.24
GABPB1-212ENST00000615671 VPS25Q9BRG1 176 aa16.56■□□□□ 0.24
GABPB1-212ENST00000615671 GNG7O60262 68 aa16.56■□□□□ 0.24
GABPB1-212ENST00000615671 GALR1P47211 349 aa16.56■□□□□ 0.24
GABPB1-212ENST00000615671 PRSS3P2Q8NHM4 247 aa16.56■□□□□ 0.24
GABPB1-212ENST00000615671 HRKO00198 91 aa16.55■□□□□ 0.24
GABPB1-212ENST00000615671 HAND1O96004 215 aa16.55■□□□□ 0.24
GABPB1-212ENST00000615671 SFTA3P0C7M3 94 aa16.55■□□□□ 0.24
GABPB1-212ENST00000615671 PRF1P14222 555 aa16.55■□□□□ 0.24
GABPB1-212ENST00000615671 CLDN20P56880 219 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms