RNA–Protein interactions for RNA: ENST00000615393.5

VEGFA-227, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 984 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-227ENST00000615393 ADAT3Q96EY9 351 aaPredicted RBP20.59■□□□□ 0.89
VEGFA-227ENST00000615393 HEXA-AS1Q9H8Q6 139 aa20.59■□□□□ 0.89
VEGFA-227ENST00000615393 K7N7A8 449 aa20.58■□□□□ 0.89
VEGFA-227ENST00000615393 CYB5AP00167 134 aa20.58■□□□□ 0.89
VEGFA-227ENST00000615393 GABRB1P18505 474 aa20.58■□□□□ 0.89
VEGFA-227ENST00000615393 NANOS3P60323 173 aaKnown RBP20.58■□□□□ 0.89
VEGFA-227ENST00000615393 ZNF91Q05481 1191 aa20.58■□□□□ 0.89
VEGFA-227ENST00000615393 ZBTB49Q6ZSB9 765 aa20.58■□□□□ 0.89
VEGFA-227ENST00000615393 UTS2BQ765I0 119 aa20.58■□□□□ 0.89
VEGFA-227ENST00000615393 EGFL6Q8IUX8 553 aa20.58■□□□□ 0.89
VEGFA-227ENST00000615393 ENTHD1Q8IYW4 607 aa20.58■□□□□ 0.89
VEGFA-227ENST00000615393 PQLC1Q8N2U9 271 aa20.58■□□□□ 0.89
VEGFA-227ENST00000615393 C4orf36Q96KX1 117 aa20.58■□□□□ 0.89
VEGFA-227ENST00000615393 AASSQ9UDR5 926 aa20.58■□□□□ 0.89
VEGFA-227ENST00000615393 NBEAL1Q6ZS30 2694 aa20.58■□□□□ 0.88
VEGFA-227ENST00000615393 INMTO95050 263 aa20.57■□□□□ 0.88
VEGFA-227ENST00000615393 OCM2P0CE71 109 aa20.57■□□□□ 0.88
VEGFA-227ENST00000615393 OCMP0CE72 109 aaPredicted RBP20.57■□□□□ 0.88
VEGFA-227ENST00000615393 DBTP11182 482 aaKnown RBP20.57■□□□□ 0.88
VEGFA-227ENST00000615393 ATF1P18846 271 aa20.57■□□□□ 0.88
VEGFA-227ENST00000615393 PRKACBP22694 351 aa20.57■□□□□ 0.88
VEGFA-227ENST00000615393 DHRS7BQ6IAN0 325 aaPredicted RBP20.57■□□□□ 0.88
VEGFA-227ENST00000615393 BEND2Q8NDZ0 799 aa20.57■□□□□ 0.88
VEGFA-227ENST00000615393 EMG1Q92979 244 aaKnown RBP20.57■□□□□ 0.88
VEGFA-227ENST00000615393 FGGYQ96C11 551 aa20.57■□□□□ 0.88
VEGFA-227ENST00000615393 PELI1Q96FA3 418 aa20.57■□□□□ 0.88
VEGFA-227ENST00000615393 HHLA2Q9UM44 414 aa20.57■□□□□ 0.88
VEGFA-227ENST00000615393 F8VVB4 439 aa20.56■□□□□ 0.88
VEGFA-227ENST00000615393 F8VWA3 439 aa20.56■□□□□ 0.88
VEGFA-227ENST00000615393 AZGP1P25311 298 aaKnown RBP20.56■□□□□ 0.88
VEGFA-227ENST00000615393 MTCP1P56278 107 aa20.56■□□□□ 0.88
VEGFA-227ENST00000615393 ERVFRD-1P60508 538 aa20.56■□□□□ 0.88
VEGFA-227ENST00000615393 GALEQ14376 348 aa20.56■□□□□ 0.88
VEGFA-227ENST00000615393 ZNF273Q14593 569 aa20.56■□□□□ 0.88
VEGFA-227ENST00000615393 LHFPL2Q6ZUX7 228 aa20.56■□□□□ 0.88
VEGFA-227ENST00000615393 RHOXF1Q8NHV9 184 aa20.56■□□□□ 0.88
VEGFA-227ENST00000615393 SPSB1Q96BD6 273 aa20.56■□□□□ 0.88
VEGFA-227ENST00000615393 SLC29A1Q99808 456 aa20.56■□□□□ 0.88
VEGFA-227ENST00000615393 ALG8Q9BVK2 526 aa20.56■□□□□ 0.88
VEGFA-227ENST00000615393 RNF114Q9Y508 228 aa20.56■□□□□ 0.88
VEGFA-227ENST00000615393 IGKV1-9A0A0C4DH69 117 aa20.55■□□□□ 0.88
VEGFA-227ENST00000615393 LOC100130705A0A1B0GUX0 176 aa20.55■□□□□ 0.88
VEGFA-227ENST00000615393 ZNF737O75373 536 aa20.55■□□□□ 0.88
VEGFA-227ENST00000615393 FADS2O95864 444 aaKnown RBP20.55■□□□□ 0.88
VEGFA-227ENST00000615393 PIPP12273 146 aaPredicted RBP20.55■□□□□ 0.88
VEGFA-227ENST00000615393 CCL3L1P16619 93 aa20.55■□□□□ 0.88
VEGFA-227ENST00000615393 POU3F4P49335 361 aa20.55■□□□□ 0.88
VEGFA-227ENST00000615393 ALKBH1Q13686 389 aaKnown RBP20.55■□□□□ 0.88
VEGFA-227ENST00000615393 GDPD3Q7L5L3 318 aa20.55■□□□□ 0.88
VEGFA-227ENST00000615393 LHFPL3Q86UP9 236 aa20.55■□□□□ 0.88
VEGFA-227ENST00000615393 C11orf42Q8N5U0 333 aa20.55■□□□□ 0.88
VEGFA-227ENST00000615393 ZNF676Q8N7Q3 588 aa20.55■□□□□ 0.88
VEGFA-227ENST00000615393 ZSCAN4Q8NAM6 433 aaPredicted RBP20.55■□□□□ 0.88
VEGFA-227ENST00000615393 OR13C3Q8NGS6 347 aa20.55■□□□□ 0.88
VEGFA-227ENST00000615393 LINC01006Q8NI28 216 aa20.55■□□□□ 0.88
VEGFA-227ENST00000615393 SNX22Q96L94 193 aa20.55■□□□□ 0.88
VEGFA-227ENST00000615393 INPP5EQ9NRR6 644 aa20.55■□□□□ 0.88
VEGFA-227ENST00000615393 RPSAP08865 295 aaKnown RBP20.54■□□□□ 0.88
VEGFA-227ENST00000615393 TGFBR2P37173 567 aa20.54■□□□□ 0.88
VEGFA-227ENST00000615393 EDDM3BP56851 147 aa20.54■□□□□ 0.88
VEGFA-227ENST00000615393 BRICD5Q6PL45 260 aa20.54■□□□□ 0.88
VEGFA-227ENST00000615393 OR8H2Q8N162 312 aa20.54■□□□□ 0.88
VEGFA-227ENST00000615393 SYS1Q8N2H4 156 aa20.54■□□□□ 0.88
VEGFA-227ENST00000615393 OPALINQ96PE5 141 aa20.54■□□□□ 0.88
VEGFA-227ENST00000615393 SEBOXQ9HB31 216 aaPredicted RBP20.54■□□□□ 0.88
VEGFA-227ENST00000615393 FAM118AQ9NWS6 357 aa20.54■□□□□ 0.88
VEGFA-227ENST00000615393 TRBV2A0A0J9YWF9 115 aa20.53■□□□□ 0.88
VEGFA-227ENST00000615393 OR4C45A6NMZ5 311 aa20.53■□□□□ 0.88
VEGFA-227ENST00000615393 HAND1O96004 215 aa20.53■□□□□ 0.88
VEGFA-227ENST00000615393 IGHA1P01876 353 aa20.53■□□□□ 0.88
VEGFA-227ENST00000615393 LGALS4P56470 323 aa20.53■□□□□ 0.88
VEGFA-227ENST00000615393 RAB40BQ12829 278 aa20.53■□□□□ 0.88
VEGFA-227ENST00000615393 MRPL28Q13084 256 aaKnown RBP20.53■□□□□ 0.88
VEGFA-227ENST00000615393 Q6ZSV7 163 aa20.53■□□□□ 0.88
VEGFA-227ENST00000615393 FAM58AQ8N1B3 248 aa20.53■□□□□ 0.88
VEGFA-227ENST00000615393 C17orf50Q8WW18 174 aa20.53■□□□□ 0.88
VEGFA-227ENST00000615393 SSX3Q99909 188 aa20.53■□□□□ 0.88
VEGFA-227ENST00000615393 MEGF9Q9H1U4 602 aa20.53■□□□□ 0.88
VEGFA-227ENST00000615393 NEK6Q9HC98 313 aa20.53■□□□□ 0.88
VEGFA-227ENST00000615393 AMBNQ9NP70 447 aa20.53■□□□□ 0.88
VEGFA-227ENST00000615393 GLS2Q9UI32 602 aa20.53■□□□□ 0.88
VEGFA-227ENST00000615393 RPL36Q9Y3U8 105 aaKnown RBP20.53■□□□□ 0.88
VEGFA-227ENST00000615393 BAG2O95816 211 aa20.52■□□□□ 0.88
VEGFA-227ENST00000615393 RBP4P02753 201 aa20.52■□□□□ 0.88
VEGFA-227ENST00000615393 COX7A1P24310 79 aa20.52■□□□□ 0.88
VEGFA-227ENST00000615393 OR51A4Q8NGJ6 313 aa20.52■□□□□ 0.88
VEGFA-227ENST00000615393 OR10AC1Q8NH08 325 aa20.52■□□□□ 0.88
VEGFA-227ENST00000615393 CITED1Q99966 193 aa20.52■□□□□ 0.88
VEGFA-227ENST00000615393 C16orf95Q9H693 158 aa20.52■□□□□ 0.88
VEGFA-227ENST00000615393 RBFOX1Q9NWB1 397 aaKnown RBP20.52■□□□□ 0.88
VEGFA-227ENST00000615393 ERVK13-1Q9NX77 482 aa20.52■□□□□ 0.88
VEGFA-227ENST00000615393 MYRFQ9Y2G1 1151 aa20.52■□□□□ 0.88
VEGFA-227ENST00000615393 C17orf98A8MV24 154 aa20.51■□□□□ 0.87
VEGFA-227ENST00000615393 H3BUX3 64 aa20.51■□□□□ 0.87
VEGFA-227ENST00000615393 MT-ND2P03891 347 aa20.51■□□□□ 0.87
VEGFA-227ENST00000615393 ZNF728P0DKX0 622 aa20.51■□□□□ 0.87
VEGFA-227ENST00000615393 BCL3P20749 454 aa20.51■□□□□ 0.87
VEGFA-227ENST00000615393 PEX2P28328 305 aa20.51■□□□□ 0.87
VEGFA-227ENST00000615393 NPBWR2P48146 333 aa20.51■□□□□ 0.87
VEGFA-227ENST00000615393 BMXP51813 675 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms