RNA–Protein interactions for RNA: ENST00000615061.4

CBWD3-211, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,771 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-211ENST00000615061 VCX3BQ9H321 246 aa13.81□□□□□ -0.2
CBWD3-211ENST00000615061 RBFOX1Q9NWB1 397 aaKnown RBP13.81□□□□□ -0.2
CBWD3-211ENST00000615061 PCDHGB5Q9Y5G0 923 aa13.81□□□□□ -0.2
CBWD3-211ENST00000615061 KIAA2026Q5HYC2 2103 aa13.8□□□□□ -0.2
CBWD3-211ENST00000615061 ANGPTL7O43827 346 aa13.8□□□□□ -0.2
CBWD3-211ENST00000615061 VENTXO95231 258 aa13.8□□□□□ -0.2
CBWD3-211ENST00000615061 LIPFP07098 398 aa13.8□□□□□ -0.2
CBWD3-211ENST00000615061 DMKNQ6E0U4 476 aaPredicted RBP13.8□□□□□ -0.2
CBWD3-211ENST00000615061 LY6G5BQ8NDX9 201 aa13.8□□□□□ -0.2
CBWD3-211ENST00000615061 OR5D14Q8NGL3 314 aa13.8□□□□□ -0.2
CBWD3-211ENST00000615061 GPR148Q8TDV2 347 aa13.8□□□□□ -0.2
CBWD3-211ENST00000615061 GHSRQ92847 366 aa13.8□□□□□ -0.2
CBWD3-211ENST00000615061 PGLYRP3Q96LB9 341 aa13.8□□□□□ -0.2
CBWD3-211ENST00000615061 WDFY2Q96P53 400 aa13.8□□□□□ -0.2
CBWD3-211ENST00000615061 NKX3-1Q99801 234 aaPredicted RBP13.8□□□□□ -0.2
CBWD3-211ENST00000615061 IGKV1-12A0A0C4DH73 117 aa13.79□□□□□ -0.2
CBWD3-211ENST00000615061 RNF212BA8MTL3 300 aa13.79□□□□□ -0.2
CBWD3-211ENST00000615061 MYL12BO14950 172 aa13.79□□□□□ -0.2
CBWD3-211ENST00000615061 SULT1B1O43704 296 aa13.79□□□□□ -0.2
CBWD3-211ENST00000615061 TOX4O94842 621 aa13.79□□□□□ -0.2
CBWD3-211ENST00000615061 IGKV1D-12P01611 117 aa13.79□□□□□ -0.2
CBWD3-211ENST00000615061 MT-ND2P03891 347 aa13.79□□□□□ -0.2
CBWD3-211ENST00000615061 CDK1P06493 297 aa13.79□□□□□ -0.2
CBWD3-211ENST00000615061 BCL3P20749 454 aa13.79□□□□□ -0.2
CBWD3-211ENST00000615061 DLX1P56177 255 aa13.79□□□□□ -0.2
CBWD3-211ENST00000615061 PRB3Q04118 309 aaPredicted RBP13.79□□□□□ -0.2
CBWD3-211ENST00000615061 PDZK1IP1Q13113 114 aa13.79□□□□□ -0.2
CBWD3-211ENST00000615061 BRD3OSQ6XYD6 125 aa13.79□□□□□ -0.2
CBWD3-211ENST00000615061 BPIFB2Q8N4F0 458 aa13.79□□□□□ -0.2
CBWD3-211ENST00000615061 NANOGP1Q8N7R0 232 aa13.79□□□□□ -0.2
CBWD3-211ENST00000615061 TMEM106AQ96A25 262 aa13.79□□□□□ -0.2
CBWD3-211ENST00000615061 SIRPDQ9H106 197 aa13.79□□□□□ -0.2
CBWD3-211ENST00000615061 CNTD2Q9H8S5 307 aa13.79□□□□□ -0.2
CBWD3-211ENST00000615061 TAS2R4Q9NYW5 299 aa13.79□□□□□ -0.2
CBWD3-211ENST00000615061 ZNF281Q9Y2X9 895 aa13.79□□□□□ -0.2
CBWD3-211ENST00000615061 HCKP08631 526 aa13.78□□□□□ -0.2
CBWD3-211ENST00000615061 RPSAP08865 295 aaKnown RBP13.78□□□□□ -0.2
CBWD3-211ENST00000615061 CAPZA1P52907 286 aa13.78□□□□□ -0.2
CBWD3-211ENST00000615061 SNU13P55769 128 aaKnown RBP13.78□□□□□ -0.2
CBWD3-211ENST00000615061 CAV3P56539 151 aa13.78□□□□□ -0.2
CBWD3-211ENST00000615061 WNT4P56705 351 aa13.78□□□□□ -0.2
CBWD3-211ENST00000615061 RPS11P62280 158 aaKnown RBP eCLIP13.78□□□□□ -0.2
CBWD3-211ENST00000615061 SCGB2A2Q13296 93 aa13.78□□□□□ -0.2
CBWD3-211ENST00000615061 METTL11BQ5VVY1 283 aa13.78□□□□□ -0.2
CBWD3-211ENST00000615061 EMG1Q92979 244 aaKnown RBP13.78□□□□□ -0.2
CBWD3-211ENST00000615061 ONECUT1Q9UBC0 465 aa13.78□□□□□ -0.2
CBWD3-211ENST00000615061 GPR37O15354 613 aa13.78□□□□□ -0.2
CBWD3-211ENST00000615061 KNG1P01042 644 aa13.78□□□□□ -0.2
CBWD3-211ENST00000615061 DUSP1P28562 367 aa13.78□□□□□ -0.2
CBWD3-211ENST00000615061 C11orf91Q3C1V1 193 aa13.78□□□□□ -0.2
CBWD3-211ENST00000615061 RUSC1-AS1Q66K80 236 aa13.78□□□□□ -0.2
CBWD3-211ENST00000615061 PDZD9Q8IXQ8 264 aa13.78□□□□□ -0.2
CBWD3-211ENST00000615061 ZNF418Q8TF45 676 aaPredicted RBP13.78□□□□□ -0.2
CBWD3-211ENST00000615061 ZNF48Q96MX3 618 aaPredicted RBP13.78□□□□□ -0.2
CBWD3-211ENST00000615061 CELP19835 753 aa13.77□□□□□ -0.21
CBWD3-211ENST00000615061 SLC35A2P78381 396 aa13.77□□□□□ -0.21
CBWD3-211ENST00000615061 COL10A1Q03692 680 aa13.77□□□□□ -0.21
CBWD3-211ENST00000615061 KISS1Q15726 138 aa13.77□□□□□ -0.21
CBWD3-211ENST00000615061 ZNF529Q6P280 563 aa13.77□□□□□ -0.21
CBWD3-211ENST00000615061 PHC2Q8IXK0 858 aa13.77□□□□□ -0.21
CBWD3-211ENST00000615061 MKXQ8IYA7 352 aa13.77□□□□□ -0.21
CBWD3-211ENST00000615061 ZNF561Q8N587 486 aa13.77□□□□□ -0.21
CBWD3-211ENST00000615061 SIGLECL1Q8N7X8 197 aa13.77□□□□□ -0.21
CBWD3-211ENST00000615061 C8orf46Q8TAG6 207 aa13.77□□□□□ -0.21
CBWD3-211ENST00000615061 CNBD2Q96M20 576 aa13.77□□□□□ -0.21
CBWD3-211ENST00000615061 MS4A7Q9GZW8 240 aaPredicted RBP13.77□□□□□ -0.21
CBWD3-211ENST00000615061 ESM1Q9NQ30 184 aa13.77□□□□□ -0.21
CBWD3-211ENST00000615061 C19orf12Q9NSK7 152 aa13.77□□□□□ -0.21
CBWD3-211ENST00000615061 SCN3BQ9NY72 215 aa13.77□□□□□ -0.21
CBWD3-211ENST00000615061 ERGIC3Q9Y282 383 aa13.77□□□□□ -0.21
CBWD3-211ENST00000615061 TRBV5-5A0A0J9YX44 114 aa13.76□□□□□ -0.21
CBWD3-211ENST00000615061 A0A1W2PPK0 400 aa13.76□□□□□ -0.21
CBWD3-211ENST00000615061 ALX3O95076 343 aa13.76□□□□□ -0.21
CBWD3-211ENST00000615061 CYB5AP00167 134 aa13.76□□□□□ -0.21
CBWD3-211ENST00000615061 RAB3AP20336 220 aa13.76□□□□□ -0.21
CBWD3-211ENST00000615061 FPR2P25090 351 aa13.76□□□□□ -0.21
CBWD3-211ENST00000615061 HILS1P60008 231 aa13.76□□□□□ -0.21
CBWD3-211ENST00000615061 ZP1P60852 638 aa13.76□□□□□ -0.21
CBWD3-211ENST00000615061 TUSC1Q2TAM9 212 aa13.76□□□□□ -0.21
CBWD3-211ENST00000615061 VMO1Q7Z5L0 202 aa13.76□□□□□ -0.21
CBWD3-211ENST00000615061 FAM58AQ8N1B3 248 aa13.76□□□□□ -0.21
CBWD3-211ENST00000615061 Q8N7P7 452 aa13.76□□□□□ -0.21
CBWD3-211ENST00000615061 ASCC1Q8N9N2 400 aaKnown RBP13.76□□□□□ -0.21
CBWD3-211ENST00000615061 OR4M1Q8NGD0 313 aa13.76□□□□□ -0.21
CBWD3-211ENST00000615061 OR52N4Q8NGI2 321 aa13.76□□□□□ -0.21
CBWD3-211ENST00000615061 OR5M11Q96RB7 305 aa13.76□□□□□ -0.21
CBWD3-211ENST00000615061 NEK6Q9HC98 313 aa13.76□□□□□ -0.21
CBWD3-211ENST00000615061 SIRT7Q9NRC8 400 aa13.76□□□□□ -0.21
CBWD3-211ENST00000615061 CENPVL3A0A0U1RRI6 287 aa13.76□□□□□ -0.21
CBWD3-211ENST00000615061 MDFIC2A0A1B0GVS7 189 aa13.76□□□□□ -0.21
CBWD3-211ENST00000615061 A0A1W2PQ09 198 aa13.76□□□□□ -0.21
CBWD3-211ENST00000615061 TK1P04183 234 aa13.76□□□□□ -0.21
CBWD3-211ENST00000615061 CD2P06729 351 aa13.76□□□□□ -0.21
CBWD3-211ENST00000615061 PRKACAP17612 351 aa13.76□□□□□ -0.21
CBWD3-211ENST00000615061 GPR157Q5UAW9 335 aa13.76□□□□□ -0.21
CBWD3-211ENST00000615061 TMEM158Q8WZ71 300 aa13.76□□□□□ -0.21
CBWD3-211ENST00000615061 LHX4Q969G2 390 aa13.76□□□□□ -0.21
CBWD3-211ENST00000615061 MYDGFQ969H8 173 aa13.76□□□□□ -0.21
CBWD3-211ENST00000615061 OR14A2Q96R54 314 aa13.76□□□□□ -0.21
CBWD3-211ENST00000615061 SUCNR1Q9BXA5 334 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms