RNA–Protein interactions for RNA: ENST00000614778.4

PDCD6-212, Transcript of programmed cell death 6, humanhuman

TSL 2 BASIC

Gene PDCD6, Length 1,050 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-212ENST00000614778 ATP1B3P54709 279 aa12.87□□□□□ -0.35
PDCD6-212ENST00000614778 ACTG1P63261 375 aa12.87□□□□□ -0.35
PDCD6-212ENST00000614778 MRPL28Q13084 256 aaKnown RBP12.87□□□□□ -0.35
PDCD6-212ENST00000614778 ASPHD2Q6ICH7 369 aa12.87□□□□□ -0.35
PDCD6-212ENST00000614778 PIP4P2Q8N4L2 257 aa12.87□□□□□ -0.35
PDCD6-212ENST00000614778 ZNF561Q8N587 486 aa12.87□□□□□ -0.35
PDCD6-212ENST00000614778 RPS4Y2Q8TD47 263 aa12.87□□□□□ -0.35
PDCD6-212ENST00000614778 FBLIM1Q8WUP2 373 aa12.87□□□□□ -0.35
PDCD6-212ENST00000614778 GATAD2BQ8WXI9 593 aa12.87□□□□□ -0.35
PDCD6-212ENST00000614778 TAF15Q92804 592 aaKnown RBP eCLIP12.87□□□□□ -0.35
PDCD6-212ENST00000614778 TNFRSF14Q92956 283 aa12.87□□□□□ -0.35
PDCD6-212ENST00000614778 SPSB1Q96BD6 273 aa12.87□□□□□ -0.35
PDCD6-212ENST00000614778 DMRTB1Q96MA1 342 aa12.87□□□□□ -0.35
PDCD6-212ENST00000614778 PRDM13Q9H4Q3 707 aa12.87□□□□□ -0.35
PDCD6-212ENST00000614778 RBFOX1Q9NWB1 397 aaKnown RBP12.87□□□□□ -0.35
PDCD6-212ENST00000614778 CAB39Q9Y376 341 aaPredicted RBP12.87□□□□□ -0.35
PDCD6-212ENST00000614778 IGKV1-12A0A0C4DH73 117 aa12.86□□□□□ -0.35
PDCD6-212ENST00000614778 A0A1W2PQ09 198 aa12.86□□□□□ -0.35
PDCD6-212ENST00000614778 SLC1A7O00341 560 aa12.86□□□□□ -0.35
PDCD6-212ENST00000614778 ANGPTL7O43827 346 aa12.86□□□□□ -0.35
PDCD6-212ENST00000614778 IGKV1D-12P01611 117 aa12.86□□□□□ -0.35
PDCD6-212ENST00000614778 MT-ND2P03891 347 aa12.86□□□□□ -0.35
PDCD6-212ENST00000614778 BPIFB3P59826 476 aa12.86□□□□□ -0.35
PDCD6-212ENST00000614778 COL10A1Q03692 680 aa12.86□□□□□ -0.35
PDCD6-212ENST00000614778 SLC34A1Q06495 639 aa12.86□□□□□ -0.35
PDCD6-212ENST00000614778 PDZK1IP1Q13113 114 aa12.86□□□□□ -0.35
PDCD6-212ENST00000614778 DOC2BQ14184 412 aa12.86□□□□□ -0.35
PDCD6-212ENST00000614778 CDK5R1Q15078 307 aa12.86□□□□□ -0.35
PDCD6-212ENST00000614778 LHFPL2Q6ZUX7 228 aa12.86□□□□□ -0.35
PDCD6-212ENST00000614778 C8orf59Q8N0T1 100 aaPredicted RBP12.86□□□□□ -0.35
PDCD6-212ENST00000614778 FAM185AQ8N0U4 392 aa12.86□□□□□ -0.35
PDCD6-212ENST00000614778 PNKDQ8N490 385 aa12.86□□□□□ -0.35
PDCD6-212ENST00000614778 ZNF485Q8NCK3 441 aa12.86□□□□□ -0.35
PDCD6-212ENST00000614778 OR4M1Q8NGD0 313 aa12.86□□□□□ -0.35
PDCD6-212ENST00000614778 OR5D18Q8NGL1 313 aa12.86□□□□□ -0.35
PDCD6-212ENST00000614778 TFAP2CQ92754 450 aa12.86□□□□□ -0.35
PDCD6-212ENST00000614778 TMEM80Q96HE8 168 aa12.86□□□□□ -0.35
PDCD6-212ENST00000614778 COMMD4Q9H0A8 199 aa12.86□□□□□ -0.35
PDCD6-212ENST00000614778 ZCCHC4Q9H5U6 513 aa12.86□□□□□ -0.35
PDCD6-212ENST00000614778 HSPE1-MOB4S4R3N1 261 aa12.86□□□□□ -0.35
PDCD6-212ENST00000614778 TRBV23-1A0A0A0MS06 115 aa12.85□□□□□ -0.35
PDCD6-212ENST00000614778 A0A0U1RQK1 487 aa12.85□□□□□ -0.35
PDCD6-212ENST00000614778 A0A1W2PRD5 423 aa12.85□□□□□ -0.35
PDCD6-212ENST00000614778 A0A1W2PRF3 423 aa12.85□□□□□ -0.35
PDCD6-212ENST00000614778 A0A1W2PRM7 423 aa12.85□□□□□ -0.35
PDCD6-212ENST00000614778 TMEM82A0PJX8 343 aa12.85□□□□□ -0.35
PDCD6-212ENST00000614778 IRGMA1A4Y4 181 aa12.85□□□□□ -0.35
PDCD6-212ENST00000614778 TMEM89A2RUT3 159 aa12.85□□□□□ -0.35
PDCD6-212ENST00000614778 HOXA3O43365 443 aaPredicted RBP12.85□□□□□ -0.35
PDCD6-212ENST00000614778 ZNF737O75373 536 aa12.85□□□□□ -0.35
PDCD6-212ENST00000614778 TK1P04183 234 aa12.85□□□□□ -0.35
PDCD6-212ENST00000614778 DUSP1P28562 367 aa12.85□□□□□ -0.35
PDCD6-212ENST00000614778 SOX2P48431 317 aa12.85□□□□□ -0.35
PDCD6-212ENST00000614778 ST3GAL4Q11206 333 aa12.85□□□□□ -0.35
PDCD6-212ENST00000614778 RPL22L1Q6P5R6 122 aaKnown RBP12.85□□□□□ -0.35
PDCD6-212ENST00000614778 TMPRSS11AQ6ZMR5 421 aa12.85□□□□□ -0.35
PDCD6-212ENST00000614778 CMTM4Q8IZR5 234 aa12.85□□□□□ -0.35
PDCD6-212ENST00000614778 PARP16Q8N5Y8 322 aa12.85□□□□□ -0.35
PDCD6-212ENST00000614778 TSEN15Q8WW01 171 aaKnown RBP12.85□□□□□ -0.35
PDCD6-212ENST00000614778 EMG1Q92979 244 aaKnown RBP12.85□□□□□ -0.35
PDCD6-212ENST00000614778 PSORS1C1Q9UIG5 152 aa12.85□□□□□ -0.35
PDCD6-212ENST00000614778 DHDHQ9UQ10 334 aa12.85□□□□□ -0.35
PDCD6-212ENST00000614778 EXOSC1Q9Y3B2 195 aaKnown RBP12.85□□□□□ -0.35
PDCD6-212ENST00000614778 MEX3AA1L020 520 aaKnown RBP12.84□□□□□ -0.35
PDCD6-212ENST00000614778 CLDN34H7C241 214 aa12.84□□□□□ -0.35
PDCD6-212ENST00000614778 K7N7A8 449 aa12.84□□□□□ -0.35
PDCD6-212ENST00000614778 M0R1W7 72 aa12.84□□□□□ -0.35
PDCD6-212ENST00000614778 OGG1O15527 345 aa12.84□□□□□ -0.35
PDCD6-212ENST00000614778 RNASE1P07998 156 aaKnown RBP12.84□□□□□ -0.35
PDCD6-212ENST00000614778 MYL12AP19105 171 aa12.84□□□□□ -0.35
PDCD6-212ENST00000614778 SNU13P55769 128 aaKnown RBP12.84□□□□□ -0.35
PDCD6-212ENST00000614778 ERVFRD-1P60508 538 aa12.84□□□□□ -0.35
PDCD6-212ENST00000614778 RPL31P62899 125 aaKnown RBP12.84□□□□□ -0.35
PDCD6-212ENST00000614778 ZNF273Q14593 569 aa12.84□□□□□ -0.35
PDCD6-212ENST00000614778 CCDC58Q4VC31 144 aa12.84□□□□□ -0.35
PDCD6-212ENST00000614778 TMEM200BQ69YZ2 307 aa12.84□□□□□ -0.35
PDCD6-212ENST00000614778 HCP5Q6MZN7 132 aa12.84□□□□□ -0.35
PDCD6-212ENST00000614778 METAP1DQ6UB28 335 aaPredicted RBP12.84□□□□□ -0.35
PDCD6-212ENST00000614778 Q6YL49 198 aa12.84□□□□□ -0.35
PDCD6-212ENST00000614778 C1orf122Q6ZSJ8 110 aa12.84□□□□□ -0.35
PDCD6-212ENST00000614778 SERPINA12Q8IW75 414 aa12.84□□□□□ -0.35
PDCD6-212ENST00000614778 MKXQ8IYA7 352 aa12.84□□□□□ -0.35
PDCD6-212ENST00000614778 C11orf42Q8N5U0 333 aa12.84□□□□□ -0.35
PDCD6-212ENST00000614778 ZFP41Q8N8Y5 198 aa12.84□□□□□ -0.35
PDCD6-212ENST00000614778 ASCC1Q8N9N2 400 aaKnown RBP12.84□□□□□ -0.35
PDCD6-212ENST00000614778 OR51A2Q8NGJ7 313 aa12.84□□□□□ -0.35
PDCD6-212ENST00000614778 OR13C5Q8NGS8 318 aa12.84□□□□□ -0.35
PDCD6-212ENST00000614778 GCDHQ92947 438 aaPredicted RBP12.84□□□□□ -0.35
PDCD6-212ENST00000614778 ZDHHC16Q969W1 377 aa12.84□□□□□ -0.35
PDCD6-212ENST00000614778 TNFRSF19Q9NS68 423 aa12.84□□□□□ -0.35
PDCD6-212ENST00000614778 BABAM2Q9NXR7 383 aa12.84□□□□□ -0.35
PDCD6-212ENST00000614778 FBN3Q75N90 2809 aa12.84□□□□□ -0.35
PDCD6-212ENST00000614778 SULT1B1O43704 296 aa12.83□□□□□ -0.36
PDCD6-212ENST00000614778 ALX3O95076 343 aa12.83□□□□□ -0.36
PDCD6-212ENST00000614778 HAND1O96004 215 aa12.83□□□□□ -0.36
PDCD6-212ENST00000614778 CHRM2P08172 466 aa12.83□□□□□ -0.36
PDCD6-212ENST00000614778 MELTFP08582 738 aa12.83□□□□□ -0.36
PDCD6-212ENST00000614778 OCM2P0CE71 109 aa12.83□□□□□ -0.36
PDCD6-212ENST00000614778 OCMP0CE72 109 aaPredicted RBP12.83□□□□□ -0.36
PDCD6-212ENST00000614778 PIPP12273 146 aaPredicted RBP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms