RNA–Protein interactions for RNA: ENST00000613122.4

CTDP1-208, Transcript of CTD phosphatase subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTDP1, Length 5,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-208ENST00000613122 OR2M3Q8NG83 312 aa17.86■□□□□ 0.45
CTDP1-208ENST00000613122 RYDENQ9NUL5 291 aaKnown RBP17.86■□□□□ 0.45
CTDP1-208ENST00000613122 UQCC1Q9NVA1 299 aa17.86■□□□□ 0.45
CTDP1-208ENST00000613122 ZNF629Q9UEG4 869 aaPredicted RBP17.86■□□□□ 0.45
CTDP1-208ENST00000613122 CD37P11049 281 aa17.85■□□□□ 0.45
CTDP1-208ENST00000613122 ZDHHC22Q8N966 263 aa17.85■□□□□ 0.45
CTDP1-208ENST00000613122 TMPRSS13Q9BYE2 586 aa17.85■□□□□ 0.45
CTDP1-208ENST00000613122 TTTY12Q9BZ98 90 aa17.85■□□□□ 0.45
CTDP1-208ENST00000613122 GPR35Q9HC97 309 aa17.85■□□□□ 0.45
CTDP1-208ENST00000613122 TMED3Q9Y3Q3 217 aa17.85■□□□□ 0.45
CTDP1-208ENST00000613122 A0A1W2PPV9 198 aa17.85■□□□□ 0.45
CTDP1-208ENST00000613122 CTDSP1Q9GZU7 261 aa17.85■□□□□ 0.45
CTDP1-208ENST00000613122 HRKO00198 91 aa17.85■□□□□ 0.45
CTDP1-208ENST00000613122 ETFDHQ16134 617 aa17.85■□□□□ 0.45
CTDP1-208ENST00000613122 BCL2L2Q92843 193 aaPredicted RBP17.85■□□□□ 0.45
CTDP1-208ENST00000613122 SIPA1L3O60292 1781 aaPredicted RBP17.85■□□□□ 0.45
CTDP1-208ENST00000613122 ADTRPQ96IZ2 230 aa17.85■□□□□ 0.45
CTDP1-208ENST00000613122 KCNMB2Q9Y691 235 aa17.85■□□□□ 0.45
CTDP1-208ENST00000613122 K7ESF4 209 aa17.85■□□□□ 0.45
CTDP1-208ENST00000613122 LGALS7P47929 136 aa17.85■□□□□ 0.45
CTDP1-208ENST00000613122 PIK3IP1Q96FE7 263 aa17.85■□□□□ 0.45
CTDP1-208ENST00000613122 GOLT1BQ9Y3E0 138 aa17.85■□□□□ 0.45
CTDP1-208ENST00000613122 CDC42EP2O14613 210 aa17.84■□□□□ 0.45
CTDP1-208ENST00000613122 LANCL1O43813 399 aa17.84■□□□□ 0.45
CTDP1-208ENST00000613122 ONECUT2O95948 504 aa17.84■□□□□ 0.45
CTDP1-208ENST00000613122 ANKRD34CP0C6C1 535 aa17.84■□□□□ 0.45
CTDP1-208ENST00000613122 GALP22466 123 aa17.84■□□□□ 0.45
CTDP1-208ENST00000613122 ID4P47928 161 aa17.84■□□□□ 0.45
CTDP1-208ENST00000613122 HMGA2P52926 109 aa17.84■□□□□ 0.45
CTDP1-208ENST00000613122 TNXAQ16473 311 aa17.84■□□□□ 0.45
CTDP1-208ENST00000613122 C1QL3Q5VWW1 255 aa17.84■□□□□ 0.45
CTDP1-208ENST00000613122 C10orf90Q96M02 699 aa17.84■□□□□ 0.45
CTDP1-208ENST00000613122 C3orf85A0A1B0GTC6 90 aa17.84■□□□□ 0.45
CTDP1-208ENST00000613122 PGA3P0DJD8 388 aa17.84■□□□□ 0.45
CTDP1-208ENST00000613122 PYCARD-AS1I3L0S3 204 aa17.84■□□□□ 0.45
CTDP1-208ENST00000613122 GFRA3O60609 400 aa17.84■□□□□ 0.45
CTDP1-208ENST00000613122 IGHV3-13P01766 116 aa17.84■□□□□ 0.45
CTDP1-208ENST00000613122 IGHV3-7P01780 117 aa17.84■□□□□ 0.45
CTDP1-208ENST00000613122 INO80CQ6PI98 192 aaPredicted RBP17.84■□□□□ 0.45
CTDP1-208ENST00000613122 SFTPA2Q8IWL1 248 aa17.84■□□□□ 0.45
CTDP1-208ENST00000613122 CADM3Q8N126 398 aa17.84■□□□□ 0.45
CTDP1-208ENST00000613122 TMEM208Q9BTX3 173 aa17.84■□□□□ 0.45
CTDP1-208ENST00000613122 SRRQ9GZT4 340 aa17.84■□□□□ 0.45
CTDP1-208ENST00000613122 HEXA-AS1Q9H8Q6 139 aa17.84■□□□□ 0.45
CTDP1-208ENST00000613122 CNTD2Q9H8S5 307 aa17.84■□□□□ 0.45
CTDP1-208ENST00000613122 TOX4O94842 621 aa17.84■□□□□ 0.45
CTDP1-208ENST00000613122 ZFP36L2P47974 494 aaKnown RBP17.84■□□□□ 0.45
CTDP1-208ENST00000613122 H3F3AP84243 136 aa17.84■□□□□ 0.45
CTDP1-208ENST00000613122 TMEM267Q0VDI3 215 aaPredicted RBP17.84■□□□□ 0.45
CTDP1-208ENST00000613122 HIKESHIQ53FT3 197 aa17.84■□□□□ 0.45
CTDP1-208ENST00000613122 SLC25A30Q5SVS4 291 aa17.84■□□□□ 0.45
CTDP1-208ENST00000613122 PRSS12P56730 875 aa17.83■□□□□ 0.45
CTDP1-208ENST00000613122 MESTQ5EB52 335 aa17.83■□□□□ 0.45
CTDP1-208ENST00000613122 RASL11BQ9BPW5 248 aa17.83■□□□□ 0.45
CTDP1-208ENST00000613122 OR2H1Q9GZK4 316 aa17.83■□□□□ 0.45
CTDP1-208ENST00000613122 FLRT3Q9NZU0 649 aa17.83■□□□□ 0.45
CTDP1-208ENST00000613122 S100A8P05109 93 aa17.83■□□□□ 0.45
CTDP1-208ENST00000613122 SSX8Q7RTT4 187 aa17.83■□□□□ 0.45
CTDP1-208ENST00000613122 HSD17B10Q99714 261 aaKnown RBP17.83■□□□□ 0.45
CTDP1-208ENST00000613122 COX6B1P14854 86 aa17.83■□□□□ 0.44
CTDP1-208ENST00000613122 FGF9P31371 208 aaPredicted RBP17.83■□□□□ 0.44
CTDP1-208ENST00000613122 MRPS11P82912 194 aaKnown RBP17.83■□□□□ 0.44
CTDP1-208ENST00000613122 C9orf40Q8IXQ3 194 aa17.83■□□□□ 0.44
CTDP1-208ENST00000613122 OR10Z1Q8NGY1 313 aa17.83■□□□□ 0.44
CTDP1-208ENST00000613122 TINAGQ9UJW2 476 aa17.83■□□□□ 0.44
CTDP1-208ENST00000613122 GAR1Q9NY12 217 aaKnown RBP17.83■□□□□ 0.44
CTDP1-208ENST00000613122 KIAA0141Q14154 515 aaPredicted RBP17.83■□□□□ 0.44
CTDP1-208ENST00000613122 C1RLQ9NZP8 487 aa17.83■□□□□ 0.44
CTDP1-208ENST00000613122 HAND1O96004 215 aa17.82■□□□□ 0.44
CTDP1-208ENST00000613122 OXA1LQ15070 435 aa17.82■□□□□ 0.44
CTDP1-208ENST00000613122 FAM162BQ5T6X4 162 aa17.82■□□□□ 0.44
CTDP1-208ENST00000613122 FBXW9Q5XUX1 488 aa17.82■□□□□ 0.44
CTDP1-208ENST00000613122 ZNF788Q6ZQV5 615 aa17.82■□□□□ 0.44
CTDP1-208ENST00000613122 WDR89Q96FK6 387 aaPredicted RBP17.82■□□□□ 0.44
CTDP1-208ENST00000613122 ZNF665Q9H7R5 613 aa17.82■□□□□ 0.44
CTDP1-208ENST00000613122 RHOBP62745 196 aa17.82■□□□□ 0.44
CTDP1-208ENST00000613122 VSTM2AQ8TAG5 236 aa17.82■□□□□ 0.44
CTDP1-208ENST00000613122 ZNF501Q96CX3 271 aaPredicted RBP17.82■□□□□ 0.44
CTDP1-208ENST00000613122 CA10Q9NS85 328 aa17.82■□□□□ 0.44
CTDP1-208ENST00000613122 COA4Q9NYJ1 87 aa17.82■□□□□ 0.44
CTDP1-208ENST00000613122 SP9P0CG40 484 aa17.82■□□□□ 0.44
CTDP1-208ENST00000613122 STARD6P59095 220 aa17.82■□□□□ 0.44
CTDP1-208ENST00000613122 BAK1Q16611 211 aa17.82■□□□□ 0.44
CTDP1-208ENST00000613122 ADAM5Q6NVV9 412 aa17.82■□□□□ 0.44
CTDP1-208ENST00000613122 DGAT2L6Q6ZPD8 337 aa17.82■□□□□ 0.44
CTDP1-208ENST00000613122 RAB40CQ96S21 281 aa17.82■□□□□ 0.44
CTDP1-208ENST00000613122 TMEM231Q9H6L2 316 aa17.82■□□□□ 0.44
CTDP1-208ENST00000613122 UBR3Q6ZT12 1888 aa17.82■□□□□ 0.44
CTDP1-208ENST00000613122 ACSM4P0C7M7 580 aa17.82■□□□□ 0.44
CTDP1-208ENST00000613122 SCAND1P57086 179 aa17.82■□□□□ 0.44
CTDP1-208ENST00000613122 ZNF705AQ6ZN79 300 aaPredicted RBP17.82■□□□□ 0.44
CTDP1-208ENST00000613122 OR4S2Q8NH73 311 aa17.82■□□□□ 0.44
CTDP1-208ENST00000613122 UCN2Q96RP3 112 aa17.82■□□□□ 0.44
CTDP1-208ENST00000613122 OOEPA6NGQ2 149 aa17.82■□□□□ 0.44
CTDP1-208ENST00000613122 CTAG2O75638 210 aa17.82■□□□□ 0.44
CTDP1-208ENST00000613122 NTF3P20783 257 aa17.82■□□□□ 0.44
CTDP1-208ENST00000613122 KRTCAP3Q53RY4 240 aa17.82■□□□□ 0.44
CTDP1-208ENST00000613122 NCR3LG1Q68D85 454 aa17.82■□□□□ 0.44
CTDP1-208ENST00000613122 LSMEM1Q8N8F7 131 aa17.82■□□□□ 0.44
CTDP1-208ENST00000613122 OR52L2PQ8NGH6 319 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms