RNA–Protein interactions for RNA: ENST00000613099.4

VPS13D-213, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13D, Length 16,245 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-213ENST00000613099 TAS2R45P59539 299 aa4.44□□□□□ -1.7
VPS13D-213ENST00000613099 C19orf48Q6RUI8 117 aa4.44□□□□□ -1.7
VPS13D-213ENST00000613099 GUCD1Q96NT3 240 aa4.44□□□□□ -1.7
VPS13D-213ENST00000613099 DCBLD2Q96PD2 775 aa4.44□□□□□ -1.7
VPS13D-213ENST00000613099 P2RX4Q99571 388 aa4.44□□□□□ -1.7
VPS13D-213ENST00000613099 TXNDC17Q9BRA2 123 aa4.44□□□□□ -1.7
VPS13D-213ENST00000613099 IGHV1-69-2A0A0G2JMI3 117 aa4.44□□□□□ -1.7
VPS13D-213ENST00000613099 CSN1S1P47710 185 aa4.44□□□□□ -1.7
VPS13D-213ENST00000613099 WDR25Q64LD2 544 aaPredicted RBP4.44□□□□□ -1.7
VPS13D-213ENST00000613099 KIAA0895LQ68EN5 471 aa4.44□□□□□ -1.7
VPS13D-213ENST00000613099 CALHM2Q9HA72 323 aa4.44□□□□□ -1.7
VPS13D-213ENST00000613099 NTNG1Q9Y2I2 539 aa4.44□□□□□ -1.7
VPS13D-213ENST00000613099 K7EP13 123 aa4.44□□□□□ -1.7
VPS13D-213ENST00000613099 SLC17A2O00624 439 aa4.44□□□□□ -1.7
VPS13D-213ENST00000613099 CTAG2O75638 210 aa4.44□□□□□ -1.7
VPS13D-213ENST00000613099 CD1AP06126 327 aa4.44□□□□□ -1.7
VPS13D-213ENST00000613099 ACRP10323 421 aa4.44□□□□□ -1.7
VPS13D-213ENST00000613099 ALOX5APP20292 161 aa4.44□□□□□ -1.7
VPS13D-213ENST00000613099 PPICP45877 212 aa4.44□□□□□ -1.7
VPS13D-213ENST00000613099 SPTSSAQ969W0 71 aa4.44□□□□□ -1.7
VPS13D-213ENST00000613099 PELI2Q9HAT8 420 aa4.44□□□□□ -1.7
VPS13D-213ENST00000613099 ZNF443Q9Y2A4 671 aaPredicted RBP4.44□□□□□ -1.7
VPS13D-213ENST00000613099 TIMM10BQ9Y5J6 103 aa4.44□□□□□ -1.7
VPS13D-213ENST00000613099 SPTBN2O15020 2390 aa4.44□□□□□ -1.7
VPS13D-213ENST00000613099 C18orf21Q32NC0 220 aaPredicted RBP4.44□□□□□ -1.7
VPS13D-213ENST00000613099 PHLDA2Q53GA4 152 aa4.44□□□□□ -1.7
VPS13D-213ENST00000613099 DCAF12L2Q5VW00 463 aa4.44□□□□□ -1.7
VPS13D-213ENST00000613099 OR4S2Q8NH73 311 aa4.44□□□□□ -1.7
VPS13D-213ENST00000613099 CLEC4CQ8WTT0 213 aa4.44□□□□□ -1.7
VPS13D-213ENST00000613099 SGCZQ96LD1 299 aa4.44□□□□□ -1.7
VPS13D-213ENST00000613099 IMMP2LQ96T52 175 aa4.44□□□□□ -1.7
VPS13D-213ENST00000613099 SLC6A13Q9NSD5 602 aa4.44□□□□□ -1.7
VPS13D-213ENST00000613099 RAB9AP51151 201 aa4.44□□□□□ -1.7
VPS13D-213ENST00000613099 SARGQ9BW04 601 aa4.44□□□□□ -1.7
VPS13D-213ENST00000613099 CST9LQ9H4G1 147 aa4.44□□□□□ -1.7
VPS13D-213ENST00000613099 A0A0G2JMM0 328 aa4.44□□□□□ -1.7
VPS13D-213ENST00000613099 A0A1W2PPB8 328 aa4.44□□□□□ -1.7
VPS13D-213ENST00000613099 KIR3DP1A8MWS1 328 aa4.44□□□□□ -1.7
VPS13D-213ENST00000613099 DEGS1O15121 323 aa4.44□□□□□ -1.7
VPS13D-213ENST00000613099 AOAHP28039 575 aa4.44□□□□□ -1.7
VPS13D-213ENST00000613099 DNAJA3Q96EY1 480 aa4.44□□□□□ -1.7
VPS13D-213ENST00000613099 NEU3Q9UQ49 428 aa4.44□□□□□ -1.7
VPS13D-213ENST00000613099 OR1A2Q9Y585 309 aa4.44□□□□□ -1.7
VPS13D-213ENST00000613099 OR2W5A6NFC9 320 aa4.44□□□□□ -1.7
VPS13D-213ENST00000613099 C4orf47A7E2U8 309 aa4.44□□□□□ -1.7
VPS13D-213ENST00000613099 VAMP5O95183 116 aa4.44□□□□□ -1.7
VPS13D-213ENST00000613099 AMBPP02760 352 aa4.44□□□□□ -1.7
VPS13D-213ENST00000613099 CLDN18P56856 261 aa4.44□□□□□ -1.7
VPS13D-213ENST00000613099 UBE2NP61088 152 aaKnown RBP4.44□□□□□ -1.7
VPS13D-213ENST00000613099 PRICKLE4Q2TBC4 344 aa4.44□□□□□ -1.7
VPS13D-213ENST00000613099 AMER3Q8N944 861 aa4.44□□□□□ -1.7
VPS13D-213ENST00000613099 SGMS2Q8NHU3 365 aa4.44□□□□□ -1.7
VPS13D-213ENST00000613099 CHST6Q9GZX3 395 aa4.44□□□□□ -1.7
VPS13D-213ENST00000613099 GEMIN7Q9H840 131 aaKnown RBP4.44□□□□□ -1.7
VPS13D-213ENST00000613099 CISD1Q9NZ45 108 aaKnown RBP4.44□□□□□ -1.7
VPS13D-213ENST00000613099 B4GALT6Q9UBX8 382 aa4.44□□□□□ -1.7
VPS13D-213ENST00000613099 ZNF257Q9Y2Q1 563 aa4.44□□□□□ -1.7
VPS13D-213ENST00000613099 LSM2Q9Y333 95 aaKnown RBP4.44□□□□□ -1.7
VPS13D-213ENST00000613099 OTOL1A6NHN0 477 aaPredicted RBP4.44□□□□□ -1.7
VPS13D-213ENST00000613099 HLA-DRB1P01911 266 aa4.44□□□□□ -1.7
VPS13D-213ENST00000613099 DAP3P51398 398 aaKnown RBP4.44□□□□□ -1.7
VPS13D-213ENST00000613099 FMODQ06828 376 aa4.44□□□□□ -1.7
VPS13D-213ENST00000613099 FCRL6Q6DN72 434 aa4.44□□□□□ -1.7
VPS13D-213ENST00000613099 OR4C11Q6IEV9 310 aa4.44□□□□□ -1.7
VPS13D-213ENST00000613099 MVB12AQ96EY5 273 aa4.44□□□□□ -1.7
VPS13D-213ENST00000613099 PCED1BQ96HM7 432 aa4.44□□□□□ -1.7
VPS13D-213ENST00000613099 SOSTQ9BQB4 213 aa4.44□□□□□ -1.7
VPS13D-213ENST00000613099 DUSP23Q9BVJ7 150 aa4.44□□□□□ -1.7
VPS13D-213ENST00000613099 LPAR5Q9H1C0 372 aa4.44□□□□□ -1.7
VPS13D-213ENST00000613099 TMEM30AQ9NV96 361 aa4.44□□□□□ -1.7
VPS13D-213ENST00000613099 GVINP1Q7Z2Y8 2422 aa4.43□□□□□ -1.7
VPS13D-213ENST00000613099 UBE2G1P62253 170 aa4.43□□□□□ -1.7
VPS13D-213ENST00000613099 SLAQ13239 276 aa4.43□□□□□ -1.7
VPS13D-213ENST00000613099 SLC10A6Q3KNW5 377 aa4.43□□□□□ -1.7
VPS13D-213ENST00000613099 PKDCCQ504Y2 493 aa4.43□□□□□ -1.7
VPS13D-213ENST00000613099 ZNF506Q5JVG8 444 aa4.43□□□□□ -1.7
VPS13D-213ENST00000613099 ZNF664Q8N3J9 261 aa4.43□□□□□ -1.7
VPS13D-213ENST00000613099 OR2A1Q8NGT9 310 aa4.43□□□□□ -1.7
VPS13D-213ENST00000613099 MARCH1Q8TCQ1 289 aa4.43□□□□□ -1.7
VPS13D-213ENST00000613099 GPBAR1Q8TDU6 330 aa4.43□□□□□ -1.7
VPS13D-213ENST00000613099 MYEOVQ96EZ4 313 aa4.43□□□□□ -1.7
VPS13D-213ENST00000613099 C11orf94C9JXX5 98 aa4.43□□□□□ -1.7
VPS13D-213ENST00000613099 GZMBP10144 247 aa4.43□□□□□ -1.7
VPS13D-213ENST00000613099 EIF3IQ13347 325 aaKnown RBP4.43□□□□□ -1.7
VPS13D-213ENST00000613099 NBPF12Q5TAG4 269 aaPredicted RBP4.43□□□□□ -1.7
VPS13D-213ENST00000613099 ISG20L2Q9H9L3 353 aaKnown RBP4.43□□□□□ -1.7
VPS13D-213ENST00000613099 ZMAT3Q9HA38 289 aaKnown RBP4.43□□□□□ -1.7
VPS13D-213ENST00000613099 SAP30LQ9HAJ7 183 aa4.43□□□□□ -1.7
VPS13D-213ENST00000613099 BCL2L10Q9HD36 194 aa4.43□□□□□ -1.7
VPS13D-213ENST00000613099 MRPL16Q9NX20 251 aaKnown RBP4.43□□□□□ -1.7
VPS13D-213ENST00000613099 SERTAD3Q9UJW9 196 aa4.43□□□□□ -1.7
VPS13D-213ENST00000613099 GREB1Q4ZG55 1949 aa4.43□□□□□ -1.7
VPS13D-213ENST00000613099 CRYBB1P53674 252 aaPredicted RBP4.43□□□□□ -1.7
VPS13D-213ENST00000613099 HES3Q5TGS1 186 aa4.43□□□□□ -1.7
VPS13D-213ENST00000613099 LHFPL4Q7Z7J7 247 aa4.43□□□□□ -1.7
VPS13D-213ENST00000613099 MEX3DQ86XN8 651 aaKnown RBP4.43□□□□□ -1.7
VPS13D-213ENST00000613099 OR8B3Q8NGG8 313 aa4.43□□□□□ -1.7
VPS13D-213ENST00000613099 NAT6Q93015 286 aa4.43□□□□□ -1.7
VPS13D-213ENST00000613099 SPACA9Q96E40 222 aaPredicted RBP4.43□□□□□ -1.7
VPS13D-213ENST00000613099 ALG14Q96F25 216 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms