RNA–Protein interactions for RNA: ENST00000612856.4

FAM3A-221, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 3,995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-221ENST00000612856 SMCO3A2RU48 225 aa9.57□□□□□ -0.88
FAM3A-221ENST00000612856 C7orf77A4D0Y5 90 aa9.57□□□□□ -0.88
FAM3A-221ENST00000612856 KIR3DP1A8MWS1 328 aa9.57□□□□□ -0.88
FAM3A-221ENST00000612856 TRAPPC2LH3BP13 241 aa9.57□□□□□ -0.88
FAM3A-221ENST00000612856 PHYHO14832 338 aa9.57□□□□□ -0.88
FAM3A-221ENST00000612856 ZNF808Q8N4W9 903 aaPredicted RBP9.57□□□□□ -0.88
FAM3A-221ENST00000612856 OR5L1Q8NGL2 311 aa9.57□□□□□ -0.88
FAM3A-221ENST00000612856 CPNE4Q96A23 557 aaPredicted RBP9.57□□□□□ -0.88
FAM3A-221ENST00000612856 HAVCR1Q96D42 359 aa9.57□□□□□ -0.88
FAM3A-221ENST00000612856 KIRREL1Q96J84 757 aa9.57□□□□□ -0.88
FAM3A-221ENST00000612856 SLC5A7Q9GZV3 580 aa9.57□□□□□ -0.88
FAM3A-221ENST00000612856 LPAR2Q9HBW0 351 aa9.57□□□□□ -0.88
FAM3A-221ENST00000612856 TP53TG5Q9Y2B4 290 aa9.57□□□□□ -0.88
FAM3A-221ENST00000612856 HDGFL3Q9Y3E1 203 aa9.57□□□□□ -0.88
FAM3A-221ENST00000612856 IGHV1-45A0A0A0MS14 117 aa9.56□□□□□ -0.88
FAM3A-221ENST00000612856 TERTO14746 1132 aaKnown RBP9.56□□□□□ -0.88
FAM3A-221ENST00000612856 SCAF4O95104 1147 aaKnown RBP9.56□□□□□ -0.88
FAM3A-221ENST00000612856 PSMB6P28072 239 aa9.56□□□□□ -0.88
FAM3A-221ENST00000612856 RAC1P63000 192 aa9.56□□□□□ -0.88
FAM3A-221ENST00000612856 MITD1Q8WV92 249 aa9.56□□□□□ -0.88
FAM3A-221ENST00000612856 RBM14Q96PK6 669 aaKnown RBP9.56□□□□□ -0.88
FAM3A-221ENST00000612856 NRIP2Q9BQI9 281 aa9.56□□□□□ -0.88
FAM3A-221ENST00000612856 UCK1Q9HA47 277 aa9.56□□□□□ -0.88
FAM3A-221ENST00000612856 GDF2Q9UK05 429 aaPredicted RBP9.56□□□□□ -0.88
FAM3A-221ENST00000612856 KCNK7Q9Y2U2 307 aa9.56□□□□□ -0.88
FAM3A-221ENST00000612856 NPTNQ9Y639 398 aa9.56□□□□□ -0.88
FAM3A-221ENST00000612856 LOC107986453A0A1B0GWG9 222 aa9.56□□□□□ -0.88
FAM3A-221ENST00000612856 ZFPL1O95159 310 aa9.56□□□□□ -0.88
FAM3A-221ENST00000612856 RAB5AP20339 215 aa9.56□□□□□ -0.88
FAM3A-221ENST00000612856 TNFSF4P23510 183 aa9.56□□□□□ -0.88
FAM3A-221ENST00000612856 ACP1P24666 158 aa9.56□□□□□ -0.88
FAM3A-221ENST00000612856 ELFN2Q5R3F8 820 aa9.56□□□□□ -0.88
FAM3A-221ENST00000612856 STAC2Q6ZMT1 411 aa9.56□□□□□ -0.88
FAM3A-221ENST00000612856 WDR88Q6ZMY6 472 aa9.56□□□□□ -0.88
FAM3A-221ENST00000612856 ANGPTL5Q86XS5 388 aa9.56□□□□□ -0.88
FAM3A-221ENST00000612856 TMEM104Q8NE00 496 aa9.56□□□□□ -0.88
FAM3A-221ENST00000612856 OR2G2Q8NGZ5 317 aa9.56□□□□□ -0.88
FAM3A-221ENST00000612856 TAF9BQ9HBM6 251 aa9.56□□□□□ -0.88
FAM3A-221ENST00000612856 ZNF729A6NN14 1252 aaPredicted RBP9.56□□□□□ -0.88
FAM3A-221ENST00000612856 ERCC1P07992 297 aaPredicted RBP9.56□□□□□ -0.88
FAM3A-221ENST00000612856 SRD5A2P31213 254 aa9.56□□□□□ -0.88
FAM3A-221ENST00000612856 MLF1P58340 268 aa9.56□□□□□ -0.88
FAM3A-221ENST00000612856 SURF2Q15527 256 aaPredicted RBP9.56□□□□□ -0.88
FAM3A-221ENST00000612856 TAF9Q16594 264 aa9.56□□□□□ -0.88
FAM3A-221ENST00000612856 DHRS7BQ6IAN0 325 aaPredicted RBP9.56□□□□□ -0.88
FAM3A-221ENST00000612856 HSD17B11Q8NBQ5 300 aa9.56□□□□□ -0.88
FAM3A-221ENST00000612856 SCCPDHQ8NBX0 429 aa9.56□□□□□ -0.88
FAM3A-221ENST00000612856 HIST1H2BAQ96A08 127 aa9.56□□□□□ -0.88
FAM3A-221ENST00000612856 SLCO5A1Q9H2Y9 848 aa9.56□□□□□ -0.88
FAM3A-221ENST00000612856 DCAF16Q9NXF7 216 aa9.56□□□□□ -0.88
FAM3A-221ENST00000612856 HIF3AQ9Y2N7 669 aa9.56□□□□□ -0.88
FAM3A-221ENST00000612856 ALPK3Q96L96 1907 aa9.56□□□□□ -0.88
FAM3A-221ENST00000612856 SLC34A2O95436 690 aa9.56□□□□□ -0.88
FAM3A-221ENST00000612856 IGHA1P01876 353 aa9.56□□□□□ -0.88
FAM3A-221ENST00000612856 GAAP10253 952 aa9.56□□□□□ -0.88
FAM3A-221ENST00000612856 COX6A1P12074 109 aa9.56□□□□□ -0.88
FAM3A-221ENST00000612856 BLVRBP30043 206 aaPredicted RBP9.56□□□□□ -0.88
FAM3A-221ENST00000612856 CLEC12BQ2HXU8 276 aa9.56□□□□□ -0.88
FAM3A-221ENST00000612856 TBC1D28Q2M2D7 210 aa9.56□□□□□ -0.88
FAM3A-221ENST00000612856 ZNF684Q5T5D7 378 aa9.56□□□□□ -0.88
FAM3A-221ENST00000612856 CARFQ8N187 725 aa9.56□□□□□ -0.88
FAM3A-221ENST00000612856 SYT3Q9BQG1 590 aa9.56□□□□□ -0.88
FAM3A-221ENST00000612856 A0A0G2JK05 382 aa9.55□□□□□ -0.88
FAM3A-221ENST00000612856 TBX19O60806 448 aa9.55□□□□□ -0.88
FAM3A-221ENST00000612856 OR8U9P0C7N5 309 aa9.55□□□□□ -0.88
FAM3A-221ENST00000612856 SELLP14151 372 aa9.55□□□□□ -0.88
FAM3A-221ENST00000612856 ADCYAP1P18509 176 aa9.55□□□□□ -0.88
FAM3A-221ENST00000612856 ZNF85Q03923 595 aa9.55□□□□□ -0.88
FAM3A-221ENST00000612856 PCOLCEQ15113 449 aa9.55□□□□□ -0.88
FAM3A-221ENST00000612856 SOHLH1Q5JUK2 328 aa9.55□□□□□ -0.88
FAM3A-221ENST00000612856 MEX3BQ6ZN04 569 aaKnown RBP9.55□□□□□ -0.88
FAM3A-221ENST00000612856 C20orf196Q8IYI0 205 aa9.55□□□□□ -0.88
FAM3A-221ENST00000612856 APCDD1LQ8NCL9 501 aa9.55□□□□□ -0.88
FAM3A-221ENST00000612856 CCL17Q92583 94 aa9.55□□□□□ -0.88
FAM3A-221ENST00000612856 SLC25A38Q96DW6 304 aa9.55□□□□□ -0.88
FAM3A-221ENST00000612856 SEC11CQ9BY50 192 aa9.55□□□□□ -0.88
FAM3A-221ENST00000612856 EXOGQ9Y2C4 368 aaKnown RBP9.55□□□□□ -0.88
FAM3A-221ENST00000612856 C3orf80F5H4A9 247 aa9.55□□□□□ -0.88
FAM3A-221ENST00000612856 EPHA1P21709 976 aa9.55□□□□□ -0.88
FAM3A-221ENST00000612856 OPRM1P35372 400 aa9.55□□□□□ -0.88
FAM3A-221ENST00000612856 EFNB2P52799 333 aa9.55□□□□□ -0.88
FAM3A-221ENST00000612856 ZNF121P58317 390 aaPredicted RBP9.55□□□□□ -0.88
FAM3A-221ENST00000612856 BDH1Q02338 343 aa9.55□□□□□ -0.88
FAM3A-221ENST00000612856 JMJD6Q6NYC1 403 aaPredicted RBP9.55□□□□□ -0.88
FAM3A-221ENST00000612856 FAM3DQ96BQ1 224 aa9.55□□□□□ -0.88
FAM3A-221ENST00000612856 FREM3P0C091 2139 aa9.55□□□□□ -0.88
FAM3A-221ENST00000612856 THY1P04216 161 aa9.55□□□□□ -0.88
FAM3A-221ENST00000612856 FBP1P09467 338 aa9.55□□□□□ -0.88
FAM3A-221ENST00000612856 ZNF93P35789 620 aaPredicted RBP9.55□□□□□ -0.88
FAM3A-221ENST00000612856 PPP1R1AQ13522 171 aa9.55□□□□□ -0.88
FAM3A-221ENST00000612856 GAMTQ14353 236 aa9.55□□□□□ -0.88
FAM3A-221ENST00000612856 SUMF2Q8NBJ7 301 aa9.55□□□□□ -0.88
FAM3A-221ENST00000612856 FLVCR1-AS1Q8TAF5 88 aa9.55□□□□□ -0.88
FAM3A-221ENST00000612856 M1APQ8TC57 530 aa9.55□□□□□ -0.88
FAM3A-221ENST00000612856 ZPLD1Q8TCW7 415 aa9.55□□□□□ -0.88
FAM3A-221ENST00000612856 MCHR2Q969V1 340 aa9.55□□□□□ -0.88
FAM3A-221ENST00000612856 CNTNAP3Q9BZ76 1288 aa9.55□□□□□ -0.88
FAM3A-221ENST00000612856 MMP26Q9NRE1 261 aa9.55□□□□□ -0.88
FAM3A-221ENST00000612856 TAS2R4Q9NYW5 299 aa9.55□□□□□ -0.88
FAM3A-221ENST00000612856 GNG12Q9UBI6 72 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms