RNA–Protein interactions for RNA: ENST00000611848.1

SMAD4-217, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-217ENST00000611848 COLCA1Q6ZS62 124 aa7.52□□□□□ -1.2
SMAD4-217ENST00000611848 UTS2BQ765I0 119 aa7.52□□□□□ -1.2
SMAD4-217ENST00000611848 CDH26Q8IXH8 852 aa7.52□□□□□ -1.2
SMAD4-217ENST00000611848 OR1M1Q8NGA1 313 aa7.52□□□□□ -1.2
SMAD4-217ENST00000611848 OR4D6Q8NGJ1 314 aa7.52□□□□□ -1.2
SMAD4-217ENST00000611848 OR5D14Q8NGL3 314 aa7.52□□□□□ -1.2
SMAD4-217ENST00000611848 KLF14Q8TD94 323 aaPredicted RBP7.52□□□□□ -1.2
SMAD4-217ENST00000611848 PHF21AQ96BD5 680 aa7.52□□□□□ -1.2
SMAD4-217ENST00000611848 ADAT3Q96EY9 351 aaPredicted RBP7.52□□□□□ -1.2
SMAD4-217ENST00000611848 HYLS1Q96M11 299 aa7.52□□□□□ -1.2
SMAD4-217ENST00000611848 VRK1Q99986 396 aaPredicted RBP7.52□□□□□ -1.2
SMAD4-217ENST00000611848 UQCC2Q9BRT2 126 aa7.52□□□□□ -1.2
SMAD4-217ENST00000611848 GON7Q9BXV9 100 aa7.52□□□□□ -1.2
SMAD4-217ENST00000611848 ATG5Q9H1Y0 275 aa7.52□□□□□ -1.2
SMAD4-217ENST00000611848 KCNK15Q9H427 330 aa7.52□□□□□ -1.2
SMAD4-217ENST00000611848 METTL17Q9H7H0 456 aaPredicted RBP7.52□□□□□ -1.2
SMAD4-217ENST00000611848 SCPEP1Q9HB40 452 aa7.52□□□□□ -1.2
SMAD4-217ENST00000611848 TMEM138Q9NPI0 162 aa7.52□□□□□ -1.2
SMAD4-217ENST00000611848 PLSCR3Q9NRY6 295 aa7.52□□□□□ -1.2
SMAD4-217ENST00000611848 PTTG3PQ9NZH4 202 aa7.52□□□□□ -1.2
SMAD4-217ENST00000611848 TAAR3PQ9P1P4 343 aa7.52□□□□□ -1.2
SMAD4-217ENST00000611848 FBLN5Q9UBX5 448 aa7.52□□□□□ -1.2
SMAD4-217ENST00000611848 FZR1Q9UM11 496 aa7.52□□□□□ -1.2
SMAD4-217ENST00000611848 FLVCR2Q9UPI3 526 aa7.52□□□□□ -1.2
SMAD4-217ENST00000611848 STARD10Q9Y365 291 aa7.52□□□□□ -1.2
SMAD4-217ENST00000611848 NPTNQ9Y639 398 aa7.52□□□□□ -1.2
SMAD4-217ENST00000611848 OTOGQ6ZRI0 2925 aa7.52□□□□□ -1.2
SMAD4-217ENST00000611848 FABP7O15540 132 aa7.52□□□□□ -1.21
SMAD4-217ENST00000611848 IGLV3-1P01715 115 aa7.52□□□□□ -1.21
SMAD4-217ENST00000611848 HPXP02790 462 aa7.52□□□□□ -1.21
SMAD4-217ENST00000611848 LCATP04180 440 aa7.52□□□□□ -1.21
SMAD4-217ENST00000611848 LPLP06858 475 aa7.52□□□□□ -1.21
SMAD4-217ENST00000611848 ANXA3P12429 323 aa7.52□□□□□ -1.21
SMAD4-217ENST00000611848 RAB3AP20336 220 aa7.52□□□□□ -1.21
SMAD4-217ENST00000611848 SLC6A9P48067 706 aa7.52□□□□□ -1.21
SMAD4-217ENST00000611848 CX3CR1P49238 355 aa7.52□□□□□ -1.21
SMAD4-217ENST00000611848 EFNA4P52798 201 aa7.52□□□□□ -1.21
SMAD4-217ENST00000611848 ZNF121P58317 390 aaPredicted RBP7.52□□□□□ -1.21
SMAD4-217ENST00000611848 QRFPP83859 136 aa7.52□□□□□ -1.21
SMAD4-217ENST00000611848 NKPD1Q17RQ9 610 aa7.52□□□□□ -1.21
SMAD4-217ENST00000611848 PCGF3Q3KNV8 242 aa7.52□□□□□ -1.21
SMAD4-217ENST00000611848 LINC01559Q495D7 138 aa7.52□□□□□ -1.21
SMAD4-217ENST00000611848 SPATA46Q5T0L3 261 aa7.52□□□□□ -1.21
SMAD4-217ENST00000611848 METTL11BQ5VVY1 283 aa7.52□□□□□ -1.21
SMAD4-217ENST00000611848 FBXW12Q6X9E4 464 aa7.52□□□□□ -1.21
SMAD4-217ENST00000611848 GLDNQ6ZMI3 551 aaPredicted RBP7.52□□□□□ -1.21
SMAD4-217ENST00000611848 Q6ZSR3 168 aa7.52□□□□□ -1.21
SMAD4-217ENST00000611848 KRTAP1-3Q8IUG1 177 aa7.52□□□□□ -1.21
SMAD4-217ENST00000611848 JAGN1Q8N5M9 183 aa7.52□□□□□ -1.21
SMAD4-217ENST00000611848 OR8B12Q8NGG6 310 aa7.52□□□□□ -1.21
SMAD4-217ENST00000611848 OR51E1Q8TCB6 317 aa7.52□□□□□ -1.21
SMAD4-217ENST00000611848 NEU4Q8WWR8 484 aaPredicted RBP7.52□□□□□ -1.21
SMAD4-217ENST00000611848 SEH1LQ96EE3 360 aa7.52□□□□□ -1.21
SMAD4-217ENST00000611848 NKX3-1Q99801 234 aaPredicted RBP7.52□□□□□ -1.21
SMAD4-217ENST00000611848 CNTD2Q9H8S5 307 aa7.52□□□□□ -1.21
SMAD4-217ENST00000611848 ZNF319Q9P2F9 582 aa7.52□□□□□ -1.21
SMAD4-217ENST00000611848 MYEF2Q9P2K5 600 aaKnown RBP7.52□□□□□ -1.21
SMAD4-217ENST00000611848 ZNF107Q9UII5 783 aaPredicted RBP7.52□□□□□ -1.21
SMAD4-217ENST00000611848 RAB22AQ9UL26 194 aa7.52□□□□□ -1.21
SMAD4-217ENST00000611848 ZNF469Q96JG9 3925 aaPredicted RBP7.51□□□□□ -1.21
SMAD4-217ENST00000611848 FLNAP21333 2647 aaKnown RBP7.51□□□□□ -1.21
SMAD4-217ENST00000611848 SNRPGP15A8MWD9 76 aa7.51□□□□□ -1.21
SMAD4-217ENST00000611848 SMLR1H3BR10 107 aa7.51□□□□□ -1.21
SMAD4-217ENST00000611848 ARPC1BO15143 372 aaKnown RBP7.51□□□□□ -1.21
SMAD4-217ENST00000611848 NDUFS7O75251 213 aa7.51□□□□□ -1.21
SMAD4-217ENST00000611848 BPNT1O95861 308 aa7.51□□□□□ -1.21
SMAD4-217ENST00000611848 MELTFP08582 738 aa7.51□□□□□ -1.21
SMAD4-217ENST00000611848 AKAIN1P0CW23 69 aa7.51□□□□□ -1.21
SMAD4-217ENST00000611848 RAC2P15153 192 aa7.51□□□□□ -1.21
SMAD4-217ENST00000611848 CXCL3P19876 107 aa7.51□□□□□ -1.21
SMAD4-217ENST00000611848 KITLGP21583 273 aa7.51□□□□□ -1.21
SMAD4-217ENST00000611848 MPV17P39210 176 aa7.51□□□□□ -1.21
SMAD4-217ENST00000611848 ALDH3B1P43353 468 aa7.51□□□□□ -1.21
SMAD4-217ENST00000611848 VEGFCP49767 419 aa7.51□□□□□ -1.21
SMAD4-217ENST00000611848 PRKXP51817 358 aa7.51□□□□□ -1.21
SMAD4-217ENST00000611848 ACTBP60709 375 aa7.51□□□□□ -1.21
SMAD4-217ENST00000611848 ACTG1P63261 375 aa7.51□□□□□ -1.21
SMAD4-217ENST00000611848 MALLQ13021 153 aa7.51□□□□□ -1.21
SMAD4-217ENST00000611848 PSG7Q13046 419 aa7.51□□□□□ -1.21
SMAD4-217ENST00000611848 RAB12Q6IQ22 244 aa7.51□□□□□ -1.21
SMAD4-217ENST00000611848 FAAP20Q6NZ36 180 aa7.51□□□□□ -1.21
SMAD4-217ENST00000611848 PGAP1Q75T13 922 aa7.51□□□□□ -1.21
SMAD4-217ENST00000611848 DOK3Q7L591 496 aa7.51□□□□□ -1.21
SMAD4-217ENST00000611848 NAA40Q86UY6 237 aa7.51□□□□□ -1.21
SMAD4-217ENST00000611848 TGIF2LYQ8IUE0 185 aa7.51□□□□□ -1.21
SMAD4-217ENST00000611848 ZNF283Q8N7M2 679 aa7.51□□□□□ -1.21
SMAD4-217ENST00000611848 TMEM229BQ8NBD8 167 aa7.51□□□□□ -1.21
SMAD4-217ENST00000611848 BEST4Q8NFU0 473 aa7.51□□□□□ -1.21
SMAD4-217ENST00000611848 OR52N4Q8NGI2 321 aa7.51□□□□□ -1.21
SMAD4-217ENST00000611848 OR4C16Q8NGL9 310 aa7.51□□□□□ -1.21
SMAD4-217ENST00000611848 NUDT16L1Q9BRJ7 211 aaKnown RBP7.51□□□□□ -1.21
SMAD4-217ENST00000611848 RANBP3Q9H6Z4 567 aaPredicted RBP7.51□□□□□ -1.21
SMAD4-217ENST00000611848 MYOZ1Q9NP98 299 aaPredicted RBP7.51□□□□□ -1.21
SMAD4-217ENST00000611848 NKIRAS2Q9NYR9 191 aa7.51□□□□□ -1.21
SMAD4-217ENST00000611848 ING4Q9UNL4 249 aa7.51□□□□□ -1.21
SMAD4-217ENST00000611848 PLSCR5A0PG75 271 aa7.5□□□□□ -1.21
SMAD4-217ENST00000611848 C17orf100A8MU93 164 aa7.5□□□□□ -1.21
SMAD4-217ENST00000611848 TIMM8AO60220 97 aaPredicted RBP7.5□□□□□ -1.21
SMAD4-217ENST00000611848 GTF2F2P13984 249 aa7.5□□□□□ -1.21
SMAD4-217ENST00000611848 SELEP16581 610 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms