RNA–Protein interactions for RNA: ENST00000610726.4

CSDE1-218, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-218ENST00000610726 NUFIP2Q7Z417 695 aaKnown RBP6.37□□□□□ -1.39
CSDE1-218ENST00000610726 C17orf82Q86X59 251 aaPredicted RBP6.37□□□□□ -1.39
CSDE1-218ENST00000610726 MRPL41Q8IXM3 137 aaKnown RBP6.37□□□□□ -1.39
CSDE1-218ENST00000610726 Q8IYB0 196 aa6.37□□□□□ -1.39
CSDE1-218ENST00000610726 OR10X1Q8NGY0 326 aa6.37□□□□□ -1.39
CSDE1-218ENST00000610726 ZNF519Q8TB69 540 aa6.37□□□□□ -1.39
CSDE1-218ENST00000610726 FAM131CQ96AQ9 280 aa6.37□□□□□ -1.39
CSDE1-218ENST00000610726 TAAR3PQ9P1P4 343 aa6.37□□□□□ -1.39
CSDE1-218ENST00000610726 CACNA1AO00555 2505 aa6.37□□□□□ -1.39
CSDE1-218ENST00000610726 TSC2P49815 1807 aa6.37□□□□□ -1.39
CSDE1-218ENST00000610726 WNK2Q9Y3S1 2297 aa6.37□□□□□ -1.39
CSDE1-218ENST00000610726 A0A0G2JMM0 328 aa6.37□□□□□ -1.39
CSDE1-218ENST00000610726 A0A1W2PPB8 328 aa6.37□□□□□ -1.39
CSDE1-218ENST00000610726 A0A1W2PRS3 328 aa6.37□□□□□ -1.39
CSDE1-218ENST00000610726 KIR3DP1A8MWS1 328 aa6.37□□□□□ -1.39
CSDE1-218ENST00000610726 AADACP22760 399 aa6.37□□□□□ -1.39
CSDE1-218ENST00000610726 ROM1Q03395 351 aa6.37□□□□□ -1.39
CSDE1-218ENST00000610726 RSPO4Q2I0M5 234 aaPredicted RBP6.37□□□□□ -1.39
CSDE1-218ENST00000610726 PLA1AQ53H76 456 aa6.37□□□□□ -1.39
CSDE1-218ENST00000610726 RELL2Q8NC24 303 aaPredicted RBP6.37□□□□□ -1.39
CSDE1-218ENST00000610726 RND1Q92730 232 aa6.37□□□□□ -1.39
CSDE1-218ENST00000610726 CHST5Q9GZS9 411 aa6.37□□□□□ -1.39
CSDE1-218ENST00000610726 HIPK2Q9H2X6 1198 aa6.37□□□□□ -1.39
CSDE1-218ENST00000610726 FN3KRPQ9HA64 309 aa6.37□□□□□ -1.39
CSDE1-218ENST00000610726 ADAM10O14672 748 aa6.37□□□□□ -1.39
CSDE1-218ENST00000610726 PIN1P1O15428 100 aa6.37□□□□□ -1.39
CSDE1-218ENST00000610726 SSSCA1O60232 199 aa6.37□□□□□ -1.39
CSDE1-218ENST00000610726 KRASP01116 189 aa6.37□□□□□ -1.39
CSDE1-218ENST00000610726 IAPPP10997 89 aa6.37□□□□□ -1.39
CSDE1-218ENST00000610726 ZNF92Q03936 586 aa6.37□□□□□ -1.39
CSDE1-218ENST00000610726 ZFP36L1Q07352 338 aaKnown RBP6.37□□□□□ -1.39
CSDE1-218ENST00000610726 ZNF266Q14584 549 aa6.37□□□□□ -1.39
CSDE1-218ENST00000610726 PIGYQ3MUY2 71 aa6.37□□□□□ -1.39
CSDE1-218ENST00000610726 ACOT7LQ6ZUV0 252 aa6.37□□□□□ -1.39
CSDE1-218ENST00000610726 PRR7Q8TB68 274 aa6.37□□□□□ -1.39
CSDE1-218ENST00000610726 RNF141Q8WVD5 230 aa6.37□□□□□ -1.39
CSDE1-218ENST00000610726 S1PR3Q99500 378 aa6.37□□□□□ -1.39
CSDE1-218ENST00000610726 UNKLQ9H9P5 680 aaKnown RBP6.37□□□□□ -1.39
CSDE1-218ENST00000610726 SF3B6Q9Y3B4 125 aaKnown RBP6.37□□□□□ -1.39
CSDE1-218ENST00000610726 IGHV3-43A0A0B4J1X8 118 aa6.36□□□□□ -1.39
CSDE1-218ENST00000610726 TMEM30CPA0ZSE6 113 aa6.36□□□□□ -1.39
CSDE1-218ENST00000610726 LRP5LA4QPB2 252 aa6.36□□□□□ -1.39
CSDE1-218ENST00000610726 IGHV3-43DP0DP04 118 aa6.36□□□□□ -1.39
CSDE1-218ENST00000610726 TNFAIP6P98066 277 aaPredicted RBP6.36□□□□□ -1.39
CSDE1-218ENST00000610726 ZNF816Q0VGE8 651 aaPredicted RBP6.36□□□□□ -1.39
CSDE1-218ENST00000610726 ZNF529Q6P280 563 aa6.36□□□□□ -1.39
CSDE1-218ENST00000610726 C17orf78Q8N4C9 275 aa6.36□□□□□ -1.39
CSDE1-218ENST00000610726 SLC35G3Q8N808 338 aa6.36□□□□□ -1.39
CSDE1-218ENST00000610726 OR5AP2Q8NGF4 316 aa6.36□□□□□ -1.39
CSDE1-218ENST00000610726 MSI2Q96DH6 328 aaKnown RBP6.36□□□□□ -1.39
CSDE1-218ENST00000610726 ZNF426Q9BUY5 554 aa6.36□□□□□ -1.39
CSDE1-218ENST00000610726 PECRQ9BY49 303 aa6.36□□□□□ -1.39
CSDE1-218ENST00000610726 ZNF355PQ9NSJ1 428 aa6.36□□□□□ -1.39
CSDE1-218ENST00000610726 CADP27708 2225 aa6.36□□□□□ -1.39
CSDE1-218ENST00000610726 CREBBPQ92793 2442 aa6.36□□□□□ -1.39
CSDE1-218ENST00000610726 IGKV1D-43A0A0B4J1Z2 117 aa6.36□□□□□ -1.39
CSDE1-218ENST00000610726 A0A0U1RQK1 487 aa6.36□□□□□ -1.39
CSDE1-218ENST00000610726 SHOXO15266 292 aa6.36□□□□□ -1.39
CSDE1-218ENST00000610726 KLF7O75840 302 aaPredicted RBP6.36□□□□□ -1.39
CSDE1-218ENST00000610726 APOA2P02652 100 aa6.36□□□□□ -1.39
CSDE1-218ENST00000610726 IL5P05113 134 aa6.36□□□□□ -1.39
CSDE1-218ENST00000610726 ADRB1P08588 477 aa6.36□□□□□ -1.39
CSDE1-218ENST00000610726 KITLGP21583 273 aa6.36□□□□□ -1.39
CSDE1-218ENST00000610726 S100A2P29034 98 aa6.36□□□□□ -1.39
CSDE1-218ENST00000610726 RPL12P30050 165 aaKnown RBP6.36□□□□□ -1.39
CSDE1-218ENST00000610726 CEACAM6P40199 344 aa6.36□□□□□ -1.39
CSDE1-218ENST00000610726 NHLRC1Q6VVB1 395 aa6.36□□□□□ -1.39
CSDE1-218ENST00000610726 ZFP62Q8NB50 900 aaPredicted RBP6.36□□□□□ -1.39
CSDE1-218ENST00000610726 TMEM104Q8NE00 496 aa6.36□□□□□ -1.39
CSDE1-218ENST00000610726 MRGPRDQ8TDS7 321 aa6.36□□□□□ -1.39
CSDE1-218ENST00000610726 HPSE2Q8WWQ2 592 aa6.36□□□□□ -1.39
CSDE1-218ENST00000610726 EDARADDQ8WWZ3 215 aa6.36□□□□□ -1.39
CSDE1-218ENST00000610726 DYRK2Q92630 601 aa6.36□□□□□ -1.39
CSDE1-218ENST00000610726 C2orf50Q96LR7 162 aa6.36□□□□□ -1.39
CSDE1-218ENST00000610726 ZNF488Q96MN9 340 aa6.36□□□□□ -1.39
CSDE1-218ENST00000610726 CNTNAP3Q9BZ76 1288 aa6.36□□□□□ -1.39
CSDE1-218ENST00000610726 OPN3Q9H1Y3 402 aaPredicted RBP6.36□□□□□ -1.39
CSDE1-218ENST00000610726 PPP1R3EQ9H7J1 279 aa6.36□□□□□ -1.39
CSDE1-218ENST00000610726 TAF9BQ9HBM6 251 aa6.36□□□□□ -1.39
CSDE1-218ENST00000610726 RPS10P5Q9NQ39 176 aa6.36□□□□□ -1.39
CSDE1-218ENST00000610726 PCDHGA9Q9Y5G4 932 aaKnown RBP6.36□□□□□ -1.39
CSDE1-218ENST00000610726 MPDZO75970 2070 aa6.36□□□□□ -1.39
CSDE1-218ENST00000610726 TRGV10A0A0A0MS01 117 aa6.36□□□□□ -1.39
CSDE1-218ENST00000610726 GPR31O00270 319 aa6.36□□□□□ -1.39
CSDE1-218ENST00000610726 IL3RAP26951 378 aa6.36□□□□□ -1.39
CSDE1-218ENST00000610726 OR3A1P47881 315 aa6.36□□□□□ -1.39
CSDE1-218ENST00000610726 CST9LP1Q5W188 147 aa6.36□□□□□ -1.39
CSDE1-218ENST00000610726 CD200R1LQ6Q8B3 271 aa6.36□□□□□ -1.39
CSDE1-218ENST00000610726 DUSP18Q8NEJ0 188 aa6.36□□□□□ -1.39
CSDE1-218ENST00000610726 POC1BQ8TC44 478 aa6.36□□□□□ -1.39
CSDE1-218ENST00000610726 S100PBPQ96BU1 408 aa6.36□□□□□ -1.39
CSDE1-218ENST00000610726 NPAS1Q99742 590 aa6.36□□□□□ -1.39
CSDE1-218ENST00000610726 PRR13Q9NZ81 148 aa6.36□□□□□ -1.39
CSDE1-218ENST00000610726 A0A1W2PNV4 684 aa6.36□□□□□ -1.39
CSDE1-218ENST00000610726 A0A1W2PPH5 198 aa6.36□□□□□ -1.39
CSDE1-218ENST00000610726 ZIC3O60481 467 aa6.36□□□□□ -1.39
CSDE1-218ENST00000610726 SCGB2A1O75556 95 aa6.36□□□□□ -1.39
CSDE1-218ENST00000610726 OR2F2O95006 317 aa6.36□□□□□ -1.39
CSDE1-218ENST00000610726 CNIH1O95406 144 aa6.36□□□□□ -1.39
CSDE1-218ENST00000610726 CD59P13987 128 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms