RNA–Protein interactions for RNA: ENST00000610488.4

PPHLN1-223, Transcript of periphilin 1, human

TSL 5 BASIC

Gene PPHLN1, Length 1,521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPHLN1-223	ENST00000610488	ELL3	Q9HB65	397 aa	Predicted RBP	11.5	□□□□□ -0.57
PPHLN1-223	ENST00000610488	GHRL	Q9UBU3	117 aa		11.5	□□□□□ -0.57
PPHLN1-223	ENST00000610488	MALRD1	Q5VYJ5	2156 aa		11.5	□□□□□ -0.57
PPHLN1-223	ENST00000610488	ATR	Q13535	2644 aa		11.5	□□□□□ -0.57
PPHLN1-223	ENST00000610488		A0A096LNT2	108 aa		11.5	□□□□□ -0.57
PPHLN1-223	ENST00000610488		A0A0A6YYH2	397 aa		11.5	□□□□□ -0.57
PPHLN1-223	ENST00000610488	IGHV2OR16-5	A0A0B4J2B6	119 aa		11.5	□□□□□ -0.57
PPHLN1-223	ENST00000610488		A0A1W2PP11	408 aa		11.5	□□□□□ -0.57
PPHLN1-223	ENST00000610488		A6NJ64	397 aa		11.5	□□□□□ -0.57
PPHLN1-223	ENST00000610488	RNF212B	A8MTL3	300 aa		11.5	□□□□□ -0.57
PPHLN1-223	ENST00000610488	GABARAP	H6UMI1	98 aa		11.5	□□□□□ -0.57
PPHLN1-223	ENST00000610488	CDC14B	O60729	498 aa		11.5	□□□□□ -0.57
PPHLN1-223	ENST00000610488	CRTAP	O75718	401 aa	Predicted RBP	11.5	□□□□□ -0.57
PPHLN1-223	ENST00000610488	PLAT	P00750	562 aa		11.5	□□□□□ -0.57
PPHLN1-223	ENST00000610488	CRYAA	P02489	173 aa		11.5	□□□□□ -0.57
PPHLN1-223	ENST00000610488	SPN	P16150	400 aa		11.5	□□□□□ -0.57
PPHLN1-223	ENST00000610488	SERPINA2	P20848	420 aa		11.5	□□□□□ -0.57
PPHLN1-223	ENST00000610488	RAD52	P43351	418 aa		11.5	□□□□□ -0.57
PPHLN1-223	ENST00000610488	ALDH3B1	P43353	468 aa		11.5	□□□□□ -0.57
PPHLN1-223	ENST00000610488	MRPS10	P82664	201 aa	Known RBP	11.5	□□□□□ -0.57
PPHLN1-223	ENST00000610488	LOXL1	Q08397	574 aa	Predicted RBP	11.5	□□□□□ -0.57
PPHLN1-223	ENST00000610488	MOGAT2	Q3SYC2	334 aa		11.5	□□□□□ -0.57
PPHLN1-223	ENST00000610488	HACD4	Q5VWC8	232 aa		11.5	□□□□□ -0.57
PPHLN1-223	ENST00000610488	GDPD3	Q7L5L3	318 aa		11.5	□□□□□ -0.57
PPHLN1-223	ENST00000610488	KRT74	Q7RTS7	529 aa		11.5	□□□□□ -0.57
PPHLN1-223	ENST00000610488	TMEM104	Q8NE00	496 aa		11.5	□□□□□ -0.57
PPHLN1-223	ENST00000610488	OR52I2	Q8NH67	350 aa		11.5	□□□□□ -0.57
PPHLN1-223	ENST00000610488	C10orf105	Q8TEF2	133 aa		11.5	□□□□□ -0.57
PPHLN1-223	ENST00000610488	FCAMR	Q8WWV6	532 aa		11.5	□□□□□ -0.57
PPHLN1-223	ENST00000610488	VRK1	Q99986	396 aa	Predicted RBP	11.5	□□□□□ -0.57
PPHLN1-223	ENST00000610488	TMEM59	Q9BXS4	323 aa		11.5	□□□□□ -0.57
PPHLN1-223	ENST00000610488	C11orf54	Q9H0W9	315 aa	Predicted RBP	11.5	□□□□□ -0.57
PPHLN1-223	ENST00000610488	BANF2	Q9H503	90 aa		11.5	□□□□□ -0.57
PPHLN1-223	ENST00000610488	COL6A5	A8TX70	2615 aa		11.49	□□□□□ -0.57
PPHLN1-223	ENST00000610488	SPRY1	O43609	319 aa	Predicted RBP	11.49	□□□□□ -0.57
PPHLN1-223	ENST00000610488	LILRA1	O75019	489 aa		11.49	□□□□□ -0.57
PPHLN1-223	ENST00000610488	CALCR	P30988	508 aa		11.49	□□□□□ -0.57
PPHLN1-223	ENST00000610488	VEGFC	P49767	419 aa		11.49	□□□□□ -0.57
PPHLN1-223	ENST00000610488	PDLIM4	P50479	330 aa		11.49	□□□□□ -0.57
PPHLN1-223	ENST00000610488	NAAA	Q02083	359 aa		11.49	□□□□□ -0.57
PPHLN1-223	ENST00000610488	CEACAM21	Q3KPI0	293 aa		11.49	□□□□□ -0.57
PPHLN1-223	ENST00000610488	C1QTNF12	Q5T7M4	302 aa		11.49	□□□□□ -0.57
PPHLN1-223	ENST00000610488	RAB12	Q6IQ22	244 aa		11.49	□□□□□ -0.57
PPHLN1-223	ENST00000610488	OR10K1	Q8NGX5	313 aa		11.49	□□□□□ -0.57
PPHLN1-223	ENST00000610488	SPATA3	Q8NHX4	192 aa		11.49	□□□□□ -0.57
PPHLN1-223	ENST00000610488	HPSE2	Q8WWQ2	592 aa		11.49	□□□□□ -0.57
PPHLN1-223	ENST00000610488	DVL3	Q92997	716 aa	Predicted RBP	11.49	□□□□□ -0.57
PPHLN1-223	ENST00000610488	HIST1H2AA	Q96QV6	131 aa		11.49	□□□□□ -0.57
PPHLN1-223	ENST00000610488	BCL2L14	Q9BZR8	327 aa		11.49	□□□□□ -0.57
PPHLN1-223	ENST00000610488	SLC22A4	Q9H015	551 aa		11.49	□□□□□ -0.57
PPHLN1-223	ENST00000610488	CST11	Q9H112	138 aa		11.49	□□□□□ -0.57
PPHLN1-223	ENST00000610488	CA10	Q9NS85	328 aa		11.49	□□□□□ -0.57
PPHLN1-223	ENST00000610488	PQLC2L	A1A4F0	135 aa		11.48	□□□□□ -0.57
PPHLN1-223	ENST00000610488	MEIOC	A2RUB1	952 aa		11.48	□□□□□ -0.57
PPHLN1-223	ENST00000610488	LYRM1	O43325	122 aa		11.48	□□□□□ -0.57
PPHLN1-223	ENST00000610488	ANGPTL7	O43827	346 aa		11.48	□□□□□ -0.57
PPHLN1-223	ENST00000610488	SCGN	O76038	276 aa		11.48	□□□□□ -0.57
PPHLN1-223	ENST00000610488	F12	P00748	615 aa	Predicted RBP	11.48	□□□□□ -0.57
PPHLN1-223	ENST00000610488	RAC2	P15153	192 aa		11.48	□□□□□ -0.57
PPHLN1-223	ENST00000610488	USF1	P22415	310 aa	Predicted RBP	11.48	□□□□□ -0.57
PPHLN1-223	ENST00000610488	GDNF	P39905	211 aa		11.48	□□□□□ -0.57
PPHLN1-223	ENST00000610488	RFX2	P48378	723 aa		11.48	□□□□□ -0.57
PPHLN1-223	ENST00000610488	SRP9	P49458	86 aa	Known RBP	11.48	□□□□□ -0.57
PPHLN1-223	ENST00000610488	RSU1	Q15404	277 aa		11.48	□□□□□ -0.57
PPHLN1-223	ENST00000610488	SWI5	Q1ZZU3	235 aa		11.48	□□□□□ -0.57
PPHLN1-223	ENST00000610488	C3orf36	Q3SXR2	165 aa		11.48	□□□□□ -0.57
PPHLN1-223	ENST00000610488	CYB5R2	Q6BCY4	276 aa		11.48	□□□□□ -0.57
PPHLN1-223	ENST00000610488	MZT2B	Q6NZ67	158 aa		11.48	□□□□□ -0.57
PPHLN1-223	ENST00000610488	NRARP	Q7Z6K4	114 aa		11.48	□□□□□ -0.57
PPHLN1-223	ENST00000610488	TOMM5	Q8N4H5	51 aa		11.48	□□□□□ -0.57
PPHLN1-223	ENST00000610488	CHST4	Q8NCG5	386 aa		11.48	□□□□□ -0.57
PPHLN1-223	ENST00000610488	MARS2	Q96GW9	593 aa	Known RBP	11.48	□□□□□ -0.57
PPHLN1-223	ENST00000610488	NICN1	Q9BSH3	213 aa		11.48	□□□□□ -0.57
PPHLN1-223	ENST00000610488	PIMREG	Q9BSJ6	248 aa		11.48	□□□□□ -0.57
PPHLN1-223	ENST00000610488	URM1	Q9BTM9	101 aa	Known RBP	11.48	□□□□□ -0.57
PPHLN1-223	ENST00000610488	FGF23	Q9GZV9	251 aa	Predicted RBP	11.48	□□□□□ -0.57
PPHLN1-223	ENST00000610488	METTL9	Q9H1A3	318 aa		11.48	□□□□□ -0.57
PPHLN1-223	ENST00000610488	LPAR5	Q9H1C0	372 aa		11.48	□□□□□ -0.57
PPHLN1-223	ENST00000610488	MPC1	Q9Y5U8	109 aa		11.48	□□□□□ -0.57
PPHLN1-223	ENST00000610488	ZNF732	B4DXR9	585 aa		11.47	□□□□□ -0.57
PPHLN1-223	ENST00000610488	RAB27B	O00194	218 aa		11.47	□□□□□ -0.57
PPHLN1-223	ENST00000610488	ORC5	O43913	435 aa		11.47	□□□□□ -0.57
PPHLN1-223	ENST00000610488	HTR3B	O95264	441 aa		11.47	□□□□□ -0.57
PPHLN1-223	ENST00000610488	IGHV4-31	P0DP07	118 aa		11.47	□□□□□ -0.57
PPHLN1-223	ENST00000610488	MGMT	P16455	207 aa		11.47	□□□□□ -0.57
PPHLN1-223	ENST00000610488	SELE	P16581	610 aa		11.47	□□□□□ -0.57
PPHLN1-223	ENST00000610488	TUBG1	P23258	451 aa		11.47	□□□□□ -0.57
PPHLN1-223	ENST00000610488	CA6	P23280	308 aa		11.47	□□□□□ -0.57
PPHLN1-223	ENST00000610488	PRSS3	P35030	304 aa		11.47	□□□□□ -0.57
PPHLN1-223	ENST00000610488	SERPINF1	P36955	418 aa		11.47	□□□□□ -0.57
PPHLN1-223	ENST00000610488	MPV17	P39210	176 aa		11.47	□□□□□ -0.57
PPHLN1-223	ENST00000610488	GPM6A	P51674	278 aa		11.47	□□□□□ -0.57
PPHLN1-223	ENST00000610488	GUCA2A	Q02747	115 aa		11.47	□□□□□ -0.57
PPHLN1-223	ENST00000610488	PSG7	Q13046	419 aa		11.47	□□□□□ -0.57
PPHLN1-223	ENST00000610488	PDZK1IP1	Q13113	114 aa		11.47	□□□□□ -0.57
PPHLN1-223	ENST00000610488	FAM189A2	Q15884	450 aa		11.47	□□□□□ -0.57
PPHLN1-223	ENST00000610488	MST1L	Q2TV78	715 aa		11.47	□□□□□ -0.57
PPHLN1-223	ENST00000610488	CCBE1	Q6UXH8	406 aa	Predicted RBP	11.47	□□□□□ -0.57
PPHLN1-223	ENST00000610488	OR5A2	Q8NGI9	324 aa		11.47	□□□□□ -0.57
PPHLN1-223	ENST00000610488	OR51T1	Q8NGJ9	327 aa		11.47	□□□□□ -0.57

Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms