RNA–Protein interactions for RNA: ENST00000610454.4

SENP3-209, Transcript of SUMO specific peptidase 3, humanhuman

TSL 3

Gene SENP3, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-209ENST00000610454 CASQ2O14958 399 aaPredicted RBP11.03□□□□□ -0.64
SENP3-209ENST00000610454 MAGEB3O15480 346 aa11.03□□□□□ -0.64
SENP3-209ENST00000610454 ZFPL1O95159 310 aa11.03□□□□□ -0.64
SENP3-209ENST00000610454 HCKP08631 526 aa11.03□□□□□ -0.64
SENP3-209ENST00000610454 LIMS3P0CW19 117 aa11.03□□□□□ -0.64
SENP3-209ENST00000610454 LIMS4P0CW20 117 aa11.03□□□□□ -0.64
SENP3-209ENST00000610454 CEBPDP49716 269 aaPredicted RBP11.03□□□□□ -0.64
SENP3-209ENST00000610454 RPL31P62899 125 aaKnown RBP11.03□□□□□ -0.64
SENP3-209ENST00000610454 ADARB1P78563 741 aaKnown RBP11.03□□□□□ -0.64
SENP3-209ENST00000610454 DEFB112Q30KQ8 113 aa11.03□□□□□ -0.64
SENP3-209ENST00000610454 NCR3LG1Q68D85 454 aa11.03□□□□□ -0.64
SENP3-209ENST00000610454 SERPINA12Q8IW75 414 aa11.03□□□□□ -0.64
SENP3-209ENST00000610454 OR5D14Q8NGL3 314 aa11.03□□□□□ -0.64
SENP3-209ENST00000610454 TBC1D15Q8TC07 691 aa11.03□□□□□ -0.64
SENP3-209ENST00000610454 CPNE2Q96FN4 548 aaPredicted RBP11.03□□□□□ -0.64
SENP3-209ENST00000610454 TMEM80Q96HE8 168 aa11.03□□□□□ -0.64
SENP3-209ENST00000610454 PDCD1LG2Q9BQ51 273 aa11.03□□□□□ -0.64
SENP3-209ENST00000610454 ZCCHC4Q9H5U6 513 aa11.03□□□□□ -0.64
SENP3-209ENST00000610454 METTL8Q9H825 291 aaKnown RBP11.03□□□□□ -0.64
SENP3-209ENST00000610454 NOX4Q9NPH5 578 aa11.03□□□□□ -0.64
SENP3-209ENST00000610454 MTCH1Q9NZJ7 389 aa11.03□□□□□ -0.64
SENP3-209ENST00000610454 GLS2Q9UI32 602 aa11.03□□□□□ -0.64
SENP3-209ENST00000610454 DIMT1Q9UNQ2 313 aaKnown RBP11.03□□□□□ -0.64
SENP3-209ENST00000610454 PCDHGB5Q9Y5G0 923 aa11.03□□□□□ -0.64
SENP3-209ENST00000610454 IGKV1-27A0A075B6S5 117 aa11.02□□□□□ -0.65
SENP3-209ENST00000610454 IGKV1-9A0A0C4DH69 117 aa11.02□□□□□ -0.65
SENP3-209ENST00000610454 MDFIC2A0A1B0GVS7 189 aa11.02□□□□□ -0.65
SENP3-209ENST00000610454 EFCAB10A6NFE3 127 aa11.02□□□□□ -0.65
SENP3-209ENST00000610454 ERICH4A6NGS2 130 aa11.02□□□□□ -0.65
SENP3-209ENST00000610454 E9PI62 339 aa11.02□□□□□ -0.65
SENP3-209ENST00000610454 CD2P06729 351 aa11.02□□□□□ -0.65
SENP3-209ENST00000610454 CHRM2P08172 466 aa11.02□□□□□ -0.65
SENP3-209ENST00000610454 ETV1P50549 477 aa11.02□□□□□ -0.65
SENP3-209ENST00000610454 ERVK11-1P61568 191 aa11.02□□□□□ -0.65
SENP3-209ENST00000610454 CCDC58Q4VC31 144 aa11.02□□□□□ -0.65
SENP3-209ENST00000610454 RPL22L1Q6P5R6 122 aaKnown RBP11.02□□□□□ -0.65
SENP3-209ENST00000610454 METAP1DQ6UB28 335 aaPredicted RBP11.02□□□□□ -0.65
SENP3-209ENST00000610454 C1orf122Q6ZSJ8 110 aa11.02□□□□□ -0.65
SENP3-209ENST00000610454 GDPD3Q7L5L3 318 aa11.02□□□□□ -0.65
SENP3-209ENST00000610454 OR5D13Q8NGL4 314 aa11.02□□□□□ -0.65
SENP3-209ENST00000610454 RFT1Q96AA3 541 aa11.02□□□□□ -0.65
SENP3-209ENST00000610454 FAM234AQ9H0X4 552 aa11.02□□□□□ -0.65
SENP3-209ENST00000610454 SOX21Q9Y651 276 aaPredicted RBP11.02□□□□□ -0.65
SENP3-209ENST00000610454 CLDN34H7C241 214 aa11.01□□□□□ -0.65
SENP3-209ENST00000610454 HOXA3O43365 443 aaPredicted RBP11.01□□□□□ -0.65
SENP3-209ENST00000610454 SPRY1O43609 319 aaPredicted RBP11.01□□□□□ -0.65
SENP3-209ENST00000610454 SULT1B1O43704 296 aa11.01□□□□□ -0.65
SENP3-209ENST00000610454 PAHP00439 452 aa11.01□□□□□ -0.65
SENP3-209ENST00000610454 MT-ND2P03891 347 aa11.01□□□□□ -0.65
SENP3-209ENST00000610454 TK1P04183 234 aa11.01□□□□□ -0.65
SENP3-209ENST00000610454 RNASE1P07998 156 aaKnown RBP11.01□□□□□ -0.65
SENP3-209ENST00000610454 PRKACAP17612 351 aa11.01□□□□□ -0.65
SENP3-209ENST00000610454 GTF2A1P52655 376 aaPredicted RBP11.01□□□□□ -0.65
SENP3-209ENST00000610454 EDDM3BP56851 147 aa11.01□□□□□ -0.65
SENP3-209ENST00000610454 COL10A1Q03692 680 aa11.01□□□□□ -0.65
SENP3-209ENST00000610454 SLC34A1Q06495 639 aa11.01□□□□□ -0.65
SENP3-209ENST00000610454 CDK5R1Q15078 307 aa11.01□□□□□ -0.65
SENP3-209ENST00000610454 SLC9A3R2Q15599 337 aa11.01□□□□□ -0.65
SENP3-209ENST00000610454 TUSC1Q2TAM9 212 aa11.01□□□□□ -0.65
SENP3-209ENST00000610454 OR2G6Q5TZ20 316 aa11.01□□□□□ -0.65
SENP3-209ENST00000610454 FAM58AQ8N1B3 248 aa11.01□□□□□ -0.65
SENP3-209ENST00000610454 STX19Q8N4C7 294 aa11.01□□□□□ -0.65
SENP3-209ENST00000610454 C3orf56Q8N813 242 aa11.01□□□□□ -0.65
SENP3-209ENST00000610454 ZSCAN4Q8NAM6 433 aaPredicted RBP11.01□□□□□ -0.65
SENP3-209ENST00000610454 OR4M1Q8NGD0 313 aa11.01□□□□□ -0.65
SENP3-209ENST00000610454 GPR148Q8TDV2 347 aa11.01□□□□□ -0.65
SENP3-209ENST00000610454 SPACA5Q96QH8 159 aa11.01□□□□□ -0.65
SENP3-209ENST00000610454 ZNF649Q9BS31 505 aa11.01□□□□□ -0.65
SENP3-209ENST00000610454 TNFRSF19Q9NS68 423 aa11.01□□□□□ -0.65
SENP3-209ENST00000610454 TMEM89A2RUT3 159 aa11□□□□□ -0.65
SENP3-209ENST00000610454 BTBD17A6NE02 478 aa11□□□□□ -0.65
SENP3-209ENST00000610454 H0YHG0 523 aa11□□□□□ -0.65
SENP3-209ENST00000610454 K7N7A8 449 aa11□□□□□ -0.65
SENP3-209ENST00000610454 MYL12BO14950 172 aa11□□□□□ -0.65
SENP3-209ENST00000610454 HAND1O96004 215 aa11□□□□□ -0.65
SENP3-209ENST00000610454 CRYBA1P05813 215 aa11□□□□□ -0.65
SENP3-209ENST00000610454 FBP1P09467 338 aa11□□□□□ -0.65
SENP3-209ENST00000610454 GNAO1P09471 354 aa11□□□□□ -0.65
SENP3-209ENST00000610454 RAB3AP20336 220 aa11□□□□□ -0.65
SENP3-209ENST00000610454 BCL3P20749 454 aa11□□□□□ -0.65
SENP3-209ENST00000610454 GABRR1P24046 479 aa11□□□□□ -0.65
SENP3-209ENST00000610454 SOX2P48431 317 aa11□□□□□ -0.65
SENP3-209ENST00000610454 SNU13P55769 128 aaKnown RBP11□□□□□ -0.65
SENP3-209ENST00000610454 PPP3R1P63098 170 aa11□□□□□ -0.65
SENP3-209ENST00000610454 ST3GAL4Q11206 333 aa11□□□□□ -0.65
SENP3-209ENST00000610454 FOXL1Q12952 345 aa11□□□□□ -0.65
SENP3-209ENST00000610454 PDZK1IP1Q13113 114 aa11□□□□□ -0.65
SENP3-209ENST00000610454 SPIN3Q5JUX0 258 aa11□□□□□ -0.65
SENP3-209ENST00000610454 Q6YL49 198 aa11□□□□□ -0.65
SENP3-209ENST00000610454 PARP16Q8N5Y8 322 aa11□□□□□ -0.65
SENP3-209ENST00000610454 Q8N7P7 452 aa11□□□□□ -0.65
SENP3-209ENST00000610454 OR5D18Q8NGL1 313 aa11□□□□□ -0.65
SENP3-209ENST00000610454 OR52N1Q8NH53 320 aa11□□□□□ -0.65
SENP3-209ENST00000610454 PPP1R35Q8TAP8 253 aa11□□□□□ -0.65
SENP3-209ENST00000610454 SSMEM1Q8WWF3 244 aa11□□□□□ -0.65
SENP3-209ENST00000610454 GPER1Q99527 375 aa11□□□□□ -0.65
SENP3-209ENST00000610454 VCX3BQ9H321 246 aa11□□□□□ -0.65
SENP3-209ENST00000610454 C19orf12Q9NSK7 152 aa11□□□□□ -0.65
SENP3-209ENST00000610454 RBFOX1Q9NWB1 397 aaKnown RBP11□□□□□ -0.65
SENP3-209ENST00000610454 BABAM2Q9NXR7 383 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms