RNA–Protein interactions for RNA: ENST00000608263.5

CTCFL-216, Transcript of CCCTC-binding factor like, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTCFL, Length 4,040 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-216ENST00000608263 RAB11AP62491 216 aa9.13□□□□□ -0.95
CTCFL-216ENST00000608263 NKX6-1P78426 367 aaPredicted RBP9.13□□□□□ -0.95
CTCFL-216ENST00000608263 GUK1Q16774 197 aa9.13□□□□□ -0.95
CTCFL-216ENST00000608263 ACER2Q5QJU3 275 aa9.13□□□□□ -0.95
CTCFL-216ENST00000608263 DEGS2Q6QHC5 323 aa9.13□□□□□ -0.95
CTCFL-216ENST00000608263 ANKRD37Q7Z713 158 aa9.13□□□□□ -0.95
CTCFL-216ENST00000608263 OR5AS1Q8N127 324 aa9.13□□□□□ -0.95
CTCFL-216ENST00000608263 CPT1CQ8TCG5 803 aa9.13□□□□□ -0.95
CTCFL-216ENST00000608263 ADIPOR1Q96A54 375 aa9.13□□□□□ -0.95
CTCFL-216ENST00000608263 SPACA9Q96E40 222 aaPredicted RBP9.13□□□□□ -0.95
CTCFL-216ENST00000608263 LPAR5Q9H1C0 372 aa9.13□□□□□ -0.95
CTCFL-216ENST00000608263 KPTNQ9Y664 436 aa9.13□□□□□ -0.95
CTCFL-216ENST00000608263 OTOGLQ3ZCN5 2332 aa9.12□□□□□ -0.95
CTCFL-216ENST00000608263 CD300LBA8K4G0 201 aa9.12□□□□□ -0.95
CTCFL-216ENST00000608263 CDRT15L2A8MXV6 281 aa9.12□□□□□ -0.95
CTCFL-216ENST00000608263 TRAPPC2LH3BP13 241 aa9.12□□□□□ -0.95
CTCFL-216ENST00000608263 RAMP1O60894 148 aa9.12□□□□□ -0.95
CTCFL-216ENST00000608263 OR2C1O95371 312 aa9.12□□□□□ -0.95
CTCFL-216ENST00000608263 S100PP25815 95 aa9.12□□□□□ -0.95
CTCFL-216ENST00000608263 EIF1P41567 113 aaKnown RBP9.12□□□□□ -0.95
CTCFL-216ENST00000608263 IDH3GP51553 393 aaPredicted RBP9.12□□□□□ -0.95
CTCFL-216ENST00000608263 ELLP55199 621 aaPredicted RBP9.12□□□□□ -0.95
CTCFL-216ENST00000608263 CLDN15P56746 228 aa9.12□□□□□ -0.95
CTCFL-216ENST00000608263 RPL23AP62750 156 aaKnown RBP9.12□□□□□ -0.95
CTCFL-216ENST00000608263 FABP9Q0Z7S8 132 aa9.12□□□□□ -0.95
CTCFL-216ENST00000608263 RPS4Y2Q8TD47 263 aa9.12□□□□□ -0.95
CTCFL-216ENST00000608263 PSMF1Q92530 271 aa9.12□□□□□ -0.95
CTCFL-216ENST00000608263 HINT2Q9BX68 163 aa9.12□□□□□ -0.95
CTCFL-216ENST00000608263 BCO1Q9HAY6 547 aa9.12□□□□□ -0.95
CTCFL-216ENST00000608263 AK3Q9UIJ7 227 aa9.12□□□□□ -0.95
CTCFL-216ENST00000608263 RCL1Q9Y2P8 373 aaKnown RBP9.12□□□□□ -0.95
CTCFL-216ENST00000608263 HTTP42858 3142 aa9.12□□□□□ -0.95
CTCFL-216ENST00000608263 KIAA2026Q5HYC2 2103 aa9.12□□□□□ -0.95
CTCFL-216ENST00000608263 SPTBN4Q9H254 2564 aa9.12□□□□□ -0.95
CTCFL-216ENST00000608263 TSPAN2O60636 221 aa9.12□□□□□ -0.95
CTCFL-216ENST00000608263 WISP1O95388 367 aa9.12□□□□□ -0.95
CTCFL-216ENST00000608263 SLC34A2O95436 690 aa9.12□□□□□ -0.95
CTCFL-216ENST00000608263 H2AFB1P0C5Y9 115 aa9.12□□□□□ -0.95
CTCFL-216ENST00000608263 LY6G6FQ5SQ64 297 aa9.12□□□□□ -0.95
CTCFL-216ENST00000608263 HIST2H3PS2Q5TEC6 136 aa9.12□□□□□ -0.95
CTCFL-216ENST00000608263 AADACL3Q5VUY0 350 aa9.12□□□□□ -0.95
CTCFL-216ENST00000608263 HIST2H3AQ71DI3 136 aa9.12□□□□□ -0.95
CTCFL-216ENST00000608263 ARHGEF39Q8N4T4 335 aa9.12□□□□□ -0.95
CTCFL-216ENST00000608263 TMEM105Q8N8V8 129 aa9.12□□□□□ -0.95
CTCFL-216ENST00000608263 MOB1AQ9H8S9 216 aa9.12□□□□□ -0.95
CTCFL-216ENST00000608263 RAB18Q9NP72 206 aa9.12□□□□□ -0.95
CTCFL-216ENST00000608263 OBP2BQ9NPH6 170 aa9.12□□□□□ -0.95
CTCFL-216ENST00000608263 MED9Q9NWA0 146 aa9.12□□□□□ -0.95
CTCFL-216ENST00000608263 PLXNB3Q9ULL4 1909 aa9.12□□□□□ -0.95
CTCFL-216ENST00000608263 GFRA3O60609 400 aa9.12□□□□□ -0.95
CTCFL-216ENST00000608263 UNC119Q13432 240 aa9.12□□□□□ -0.95
CTCFL-216ENST00000608263 OR1C1Q15619 314 aa9.12□□□□□ -0.95
CTCFL-216ENST00000608263 CEACAM16Q2WEN9 425 aa9.12□□□□□ -0.95
CTCFL-216ENST00000608263 ANKRD55Q3KP44 614 aa9.12□□□□□ -0.95
CTCFL-216ENST00000608263 LYZL2Q7Z4W2 148 aa9.12□□□□□ -0.95
CTCFL-216ENST00000608263 LRRC75AQ8NAA5 344 aa9.12□□□□□ -0.95
CTCFL-216ENST00000608263 ZNF385AQ96PM9 386 aaKnown RBP9.12□□□□□ -0.95
CTCFL-216ENST00000608263 G6PC2Q9NQR9 355 aa9.12□□□□□ -0.95
CTCFL-216ENST00000608263 GNG13Q9P2W3 67 aa9.12□□□□□ -0.95
CTCFL-216ENST00000608263 A0A1W2PPH5 198 aa9.11□□□□□ -0.95
CTCFL-216ENST00000608263 A0A1W2PR80 420 aa9.11□□□□□ -0.95
CTCFL-216ENST00000608263 ROM1Q03395 351 aa9.11□□□□□ -0.95
CTCFL-216ENST00000608263 NCMAPQ5T1S8 102 aa9.11□□□□□ -0.95
CTCFL-216ENST00000608263 OR8G2PQ6IF36 304 aa9.11□□□□□ -0.95
CTCFL-216ENST00000608263 RHBDD2Q6NTF9 364 aa9.11□□□□□ -0.95
CTCFL-216ENST00000608263 ETV3LQ6ZN32 361 aa9.11□□□□□ -0.95
CTCFL-216ENST00000608263 RNF144BQ7Z419 303 aa9.11□□□□□ -0.95
CTCFL-216ENST00000608263 CT55Q8WUE5 264 aa9.11□□□□□ -0.95
CTCFL-216ENST00000608263 PHYHIPLQ96FC7 376 aa9.11□□□□□ -0.95
CTCFL-216ENST00000608263 PECRQ9BY49 303 aa9.11□□□□□ -0.95
CTCFL-216ENST00000608263 DYNLRB1Q9NP97 96 aa9.11□□□□□ -0.95
CTCFL-216ENST00000608263 DNAJB11Q9UBS4 358 aa9.11□□□□□ -0.95
CTCFL-216ENST00000608263 LPAR3Q9UBY5 353 aa9.11□□□□□ -0.95
CTCFL-216ENST00000608263 RAB19A4D1S5 217 aa9.11□□□□□ -0.95
CTCFL-216ENST00000608263 ZNF705GA8MUZ8 300 aaPredicted RBP9.11□□□□□ -0.95
CTCFL-216ENST00000608263 A8MXK9 166 aa9.11□□□□□ -0.95
CTCFL-216ENST00000608263 FTCDNL1E5RQL4 147 aa9.11□□□□□ -0.95
CTCFL-216ENST00000608263 DLL1O00548 723 aa9.11□□□□□ -0.95
CTCFL-216ENST00000608263 PRRG2O14669 202 aa9.11□□□□□ -0.95
CTCFL-216ENST00000608263 HMGB3O15347 200 aaKnown RBP9.11□□□□□ -0.95
CTCFL-216ENST00000608263 EIF1BO60739 113 aaKnown RBP9.11□□□□□ -0.95
CTCFL-216ENST00000608263 IAPPP10997 89 aa9.11□□□□□ -0.95
CTCFL-216ENST00000608263 SRSF3P84103 164 aaKnown RBP9.11□□□□□ -0.95
CTCFL-216ENST00000608263 FHL1Q13642 323 aa9.11□□□□□ -0.95
CTCFL-216ENST00000608263 UQCC3Q6UW78 93 aa9.11□□□□□ -0.95
CTCFL-216ENST00000608263 ZNF709Q8N972 641 aa9.11□□□□□ -0.95
CTCFL-216ENST00000608263 LILRB1Q8NHL6 650 aaPredicted RBP9.11□□□□□ -0.95
CTCFL-216ENST00000608263 SLC25A43Q8WUT9 341 aaPredicted RBP9.11□□□□□ -0.95
CTCFL-216ENST00000608263 NANOS1Q8WY41 292 aaKnown RBP9.11□□□□□ -0.95
CTCFL-216ENST00000608263 CLCC1Q96S66 551 aa9.11□□□□□ -0.95
CTCFL-216ENST00000608263 CSPG4Q6UVK1 2322 aa9.11□□□□□ -0.95
CTCFL-216ENST00000608263 LOC102725191A0A1B0GVB3 256 aa9.11□□□□□ -0.95
CTCFL-216ENST00000608263 RNF222A6NCQ9 220 aa9.11□□□□□ -0.95
CTCFL-216ENST00000608263 E5RGE8 158 aa9.11□□□□□ -0.95
CTCFL-216ENST00000608263 EIF3GO75821 320 aaKnown RBP eCLIP9.11□□□□□ -0.95
CTCFL-216ENST00000608263 ACTL6AO96019 429 aa9.11□□□□□ -0.95
CTCFL-216ENST00000608263 CST4P01036 141 aa9.11□□□□□ -0.95
CTCFL-216ENST00000608263 FTH1P19P0C7X4 201 aa9.11□□□□□ -0.95
CTCFL-216ENST00000608263 FHITP49789 147 aa9.11□□□□□ -0.95
CTCFL-216ENST00000608263 C3AR1Q16581 482 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms