RNA–Protein interactions for RNA: ENST00000606785.1

LINC00397-202, long intergenic non-protein coding RNA 397, humanhuman

TSL 5 BASIC

Gene LINC00397, Length 409 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-202ENST00000606785 TMEM56Q96MV1 263 aa3.57□□□□□ -1.84
LINC00397-202ENST00000606785 HBEGFQ99075 208 aa3.57□□□□□ -1.84
LINC00397-202ENST00000606785 C1orf198Q9H425 327 aa3.57□□□□□ -1.84
LINC00397-202ENST00000606785 NMNAT1Q9HAN9 279 aaPredicted RBP3.57□□□□□ -1.84
LINC00397-202ENST00000606785 DAZ3Q9NR90 486 aaKnown RBP3.57□□□□□ -1.84
LINC00397-202ENST00000606785 SIRT7Q9NRC8 400 aa3.57□□□□□ -1.84
LINC00397-202ENST00000606785 PLSCR3Q9NRY6 295 aa3.57□□□□□ -1.84
LINC00397-202ENST00000606785 MCUBQ9NWR8 336 aa3.57□□□□□ -1.84
LINC00397-202ENST00000606785 C1orf109Q9NX04 203 aa3.57□□□□□ -1.84
LINC00397-202ENST00000606785 MAT2BQ9NZL9 334 aa3.57□□□□□ -1.84
LINC00397-202ENST00000606785 DKKL1Q9UK85 242 aa3.57□□□□□ -1.84
LINC00397-202ENST00000606785 UTP11Q9Y3A2 253 aaKnown RBP3.57□□□□□ -1.84
LINC00397-202ENST00000606785 TMEM56-RWDD3S4R434 201 aa3.57□□□□□ -1.84
LINC00397-202ENST00000606785 DENND4AQ7Z401 1863 aa3.56□□□□□ -1.84
LINC00397-202ENST00000606785 TTC37Q6PGP7 1564 aa3.56□□□□□ -1.84
LINC00397-202ENST00000606785 ARHGAP23Q9P227 1491 aa3.56□□□□□ -1.84
LINC00397-202ENST00000606785 ZNF609O15014 1411 aa3.56□□□□□ -1.84
LINC00397-202ENST00000606785 UACAQ9BZF9 1416 aa3.56□□□□□ -1.84
LINC00397-202ENST00000606785 CARMIL3Q8ND23 1372 aa3.56□□□□□ -1.84
LINC00397-202ENST00000606785 MED23Q9ULK4 1368 aa3.56□□□□□ -1.84
LINC00397-202ENST00000606785 IGKV3D-20A0A0C4DH25 116 aa3.56□□□□□ -1.84
LINC00397-202ENST00000606785 LINC00862A6NCI5 91 aa3.56□□□□□ -1.84
LINC00397-202ENST00000606785 LEUTXA8MZ59 168 aa3.56□□□□□ -1.84
LINC00397-202ENST00000606785 DISC1C4P0D8 188 aa3.56□□□□□ -1.84
LINC00397-202ENST00000606785 TSTD3H0UI37 97 aa3.56□□□□□ -1.84
LINC00397-202ENST00000606785 H7C2Y5 167 aa3.56□□□□□ -1.84
LINC00397-202ENST00000606785 RFXANKO14593 260 aa3.56□□□□□ -1.84
LINC00397-202ENST00000606785 KLRC4O43908 158 aa3.56□□□□□ -1.84
LINC00397-202ENST00000606785 ENTPD5O75356 428 aa3.56□□□□□ -1.84
LINC00397-202ENST00000606785 TDP2O95551 362 aa3.56□□□□□ -1.84
LINC00397-202ENST00000606785 ETHE1O95571 254 aa3.56□□□□□ -1.84
LINC00397-202ENST00000606785 OXTP01178 125 aa3.56□□□□□ -1.84
LINC00397-202ENST00000606785 INSP01308 110 aa3.56□□□□□ -1.84
LINC00397-202ENST00000606785 KLK1P06870 262 aa3.56□□□□□ -1.84
LINC00397-202ENST00000606785 ZNF30P17039 623 aa3.56□□□□□ -1.84
LINC00397-202ENST00000606785 COILP38432 576 aaPredicted RBP3.56□□□□□ -1.84
LINC00397-202ENST00000606785 PPOXP50336 477 aa3.56□□□□□ -1.84
LINC00397-202ENST00000606785 CRYBA4P53673 196 aa3.56□□□□□ -1.84
LINC00397-202ENST00000606785 DYNLL1P63167 89 aaKnown RBP3.56□□□□□ -1.84
LINC00397-202ENST00000606785 FAM3AP98173 230 aa3.56□□□□□ -1.84
LINC00397-202ENST00000606785 IL5RAQ01344 420 aa3.56□□□□□ -1.84
LINC00397-202ENST00000606785 TCP10Q12799 353 aa3.56□□□□□ -1.84
LINC00397-202ENST00000606785 SRSF6Q13247 344 aaKnown RBP3.56□□□□□ -1.84
LINC00397-202ENST00000606785 BIKQ13323 160 aa3.56□□□□□ -1.84
LINC00397-202ENST00000606785 APOFQ13790 326 aa3.56□□□□□ -1.84
LINC00397-202ENST00000606785 TRAM1Q15629 374 aa3.56□□□□□ -1.84
LINC00397-202ENST00000606785 ZNF239Q16600 458 aaKnown RBP3.56□□□□□ -1.84
LINC00397-202ENST00000606785 TTLL9Q3SXZ7 439 aa3.56□□□□□ -1.84
LINC00397-202ENST00000606785 SPIN3Q5JUX0 258 aa3.56□□□□□ -1.84
LINC00397-202ENST00000606785 FBXW9Q5XUX1 488 aa3.56□□□□□ -1.84
LINC00397-202ENST00000606785 SPINK14Q6IE38 97 aa3.56□□□□□ -1.84
LINC00397-202ENST00000606785 XKRXQ6PP77 449 aa3.56□□□□□ -1.84
LINC00397-202ENST00000606785 C12orf54Q6X4T0 127 aa3.56□□□□□ -1.84
LINC00397-202ENST00000606785 ZNF493Q6ZR52 646 aa3.56□□□□□ -1.84
LINC00397-202ENST00000606785 ZNF621Q6ZSS3 439 aa3.56□□□□□ -1.84
LINC00397-202ENST00000606785 LINC00336Q6ZUF6 198 aa3.56□□□□□ -1.84
LINC00397-202ENST00000606785 ABHD13Q7L211 337 aa3.56□□□□□ -1.84
LINC00397-202ENST00000606785 TMEM144Q7Z5S9 345 aa3.56□□□□□ -1.84
LINC00397-202ENST00000606785 CAMK2N1Q7Z7J9 78 aa3.56□□□□□ -1.84
LINC00397-202ENST00000606785 VKORC1L1Q8N0U8 176 aa3.56□□□□□ -1.84
LINC00397-202ENST00000606785 PGAM4Q8N0Y7 254 aa3.56□□□□□ -1.84
LINC00397-202ENST00000606785 C4orf33Q8N1A6 199 aa3.56□□□□□ -1.84
LINC00397-202ENST00000606785 CLDN22Q8N7P3 220 aa3.56□□□□□ -1.84
LINC00397-202ENST00000606785 DCAF4L2Q8NA75 395 aa3.56□□□□□ -1.84
LINC00397-202ENST00000606785 TMEM161BQ8NDZ6 487 aa3.56□□□□□ -1.84
LINC00397-202ENST00000606785 OR8J3Q8NGG0 315 aa3.56□□□□□ -1.84
LINC00397-202ENST00000606785 OR52E2Q8NGJ4 325 aa3.56□□□□□ -1.84
LINC00397-202ENST00000606785 OR4S2Q8NH73 311 aa3.56□□□□□ -1.84
LINC00397-202ENST00000606785 PHF10Q8WUB8 498 aaKnown RBP3.56□□□□□ -1.84
LINC00397-202ENST00000606785 FAM131CQ96AQ9 280 aa3.56□□□□□ -1.84
LINC00397-202ENST00000606785 RPEQ96AT9 228 aa3.56□□□□□ -1.84
LINC00397-202ENST00000606785 OR2M2Q96R28 347 aa3.56□□□□□ -1.84
LINC00397-202ENST00000606785 TSNAXQ99598 290 aaKnown RBP3.56□□□□□ -1.84
LINC00397-202ENST00000606785 TIMM29Q9BSF4 260 aa3.56□□□□□ -1.84
LINC00397-202ENST00000606785 RSG1Q9BU20 258 aa3.56□□□□□ -1.84
LINC00397-202ENST00000606785 ZNF426Q9BUY5 554 aa3.56□□□□□ -1.84
LINC00397-202ENST00000606785 MROQ9BYG7 248 aa3.56□□□□□ -1.84
LINC00397-202ENST00000606785 NAA50Q9GZZ1 169 aaKnown RBP3.56□□□□□ -1.84
LINC00397-202ENST00000606785 ING2Q9H160 280 aa3.56□□□□□ -1.84
LINC00397-202ENST00000606785 PORCNQ9H237 461 aa3.56□□□□□ -1.84
LINC00397-202ENST00000606785 HMG20AQ9NP66 347 aa3.56□□□□□ -1.84
LINC00397-202ENST00000606785 PLEKHJ1Q9NW61 149 aa3.56□□□□□ -1.84
LINC00397-202ENST00000606785 ZNF226Q9NYT6 803 aa3.56□□□□□ -1.84
LINC00397-202ENST00000606785 RSL24D1Q9UHA3 163 aaKnown RBP3.56□□□□□ -1.84
LINC00397-202ENST00000606785 NUFIP1Q9UHK0 495 aaKnown RBP3.56□□□□□ -1.84
LINC00397-202ENST00000606785 RAB26Q9ULW5 256 aa3.56□□□□□ -1.84
LINC00397-202ENST00000606785 SLC7A11Q9UPY5 501 aa3.56□□□□□ -1.84
LINC00397-202ENST00000606785 PCM1Q15154 2024 aa3.56□□□□□ -1.84
LINC00397-202ENST00000606785 CHD1O14646 1710 aa3.56□□□□□ -1.84
LINC00397-202ENST00000606785 WDR62O43379 1518 aa3.55□□□□□ -1.84
LINC00397-202ENST00000606785 A2MP01023 1474 aa3.55□□□□□ -1.84
LINC00397-202ENST00000606785 MYOM3Q5VTT5 1437 aa3.55□□□□□ -1.84
LINC00397-202ENST00000606785 FMN1Q68DA7 1419 aa3.55□□□□□ -1.84
LINC00397-202ENST00000606785 NFASCO94856 1347 aa3.55□□□□□ -1.84
LINC00397-202ENST00000606785 YLPM1P49750 1951 aaKnown RBP3.55□□□□□ -1.84
LINC00397-202ENST00000606785 CHD5Q8TDI0 1954 aa3.55□□□□□ -1.84
LINC00397-202ENST00000606785 IGLV3-10A0A075B6K4 115 aa3.55□□□□□ -1.84
LINC00397-202ENST00000606785 IGLV1-36A0A0B4J1U3 117 aa3.55□□□□□ -1.84
LINC00397-202ENST00000606785 A0A1B0GTI1 187 aa3.55□□□□□ -1.84
LINC00397-202ENST00000606785 CIB4A0PJX0 185 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms