RNA–Protein interactions for RNA: ENST00000605847.5

NEDD8-MDP1-204, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 758 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-204ENST00000605847 DCLRE1BQ9H816 532 aa12.13□□□□□ -0.47
NEDD8-MDP1-204ENST00000605847 HES4Q9HCC6 221 aa12.13□□□□□ -0.47
NEDD8-MDP1-204ENST00000605847 SAR1AQ9NR31 198 aa12.13□□□□□ -0.47
NEDD8-MDP1-204ENST00000605847 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.13□□□□□ -0.47
NEDD8-MDP1-204ENST00000605847 HHLA2Q9UM44 414 aa12.13□□□□□ -0.47
NEDD8-MDP1-204ENST00000605847 BAIAP2Q9UQB8 552 aa12.13□□□□□ -0.47
NEDD8-MDP1-204ENST00000605847 PIGLQ9Y2B2 252 aa12.13□□□□□ -0.47
NEDD8-MDP1-204ENST00000605847 SIRT4Q9Y6E7 314 aaPredicted RBP12.13□□□□□ -0.47
NEDD8-MDP1-204ENST00000605847 ARRDC5A6NEK1 342 aa12.12□□□□□ -0.47
NEDD8-MDP1-204ENST00000605847 ZNF737O75373 536 aa12.12□□□□□ -0.47
NEDD8-MDP1-204ENST00000605847 RRM2P31350 389 aa12.12□□□□□ -0.47
NEDD8-MDP1-204ENST00000605847 CCDC144NLQ6NUI1 221 aa12.12□□□□□ -0.47
NEDD8-MDP1-204ENST00000605847 TEX38Q6PEX7 206 aa12.12□□□□□ -0.47
NEDD8-MDP1-204ENST00000605847 ASRGL1Q7L266 308 aa12.12□□□□□ -0.47
NEDD8-MDP1-204ENST00000605847 OR2T33Q8NG76 320 aa12.12□□□□□ -0.47
NEDD8-MDP1-204ENST00000605847 OR8D4Q8NGM9 314 aa12.12□□□□□ -0.47
NEDD8-MDP1-204ENST00000605847 TRMT10AQ8TBZ6 339 aaKnown RBP12.12□□□□□ -0.47
NEDD8-MDP1-204ENST00000605847 SNX22Q96L94 193 aa12.12□□□□□ -0.47
NEDD8-MDP1-204ENST00000605847 A0A0U1RQV5 110 aa12.11□□□□□ -0.47
NEDD8-MDP1-204ENST00000605847 TOR1AO14656 332 aa12.11□□□□□ -0.47
NEDD8-MDP1-204ENST00000605847 FRMD6-AS1P0C7T7 363 aa12.11□□□□□ -0.47
NEDD8-MDP1-204ENST00000605847 PEX2P28328 305 aa12.11□□□□□ -0.47
NEDD8-MDP1-204ENST00000605847 INSL3P51460 131 aa12.11□□□□□ -0.47
NEDD8-MDP1-204ENST00000605847 FAM27D1Q5T7N8 215 aa12.11□□□□□ -0.47
NEDD8-MDP1-204ENST00000605847 RASSF6Q6ZTQ3 369 aa12.11□□□□□ -0.47
NEDD8-MDP1-204ENST00000605847 SLC35E3Q7Z769 313 aa12.11□□□□□ -0.47
NEDD8-MDP1-204ENST00000605847 ZNF454Q8N9F8 522 aa12.11□□□□□ -0.47
NEDD8-MDP1-204ENST00000605847 OTOSQ8NHW6 89 aa12.11□□□□□ -0.47
NEDD8-MDP1-204ENST00000605847 ATP6V1G3Q96LB4 118 aa12.11□□□□□ -0.47
NEDD8-MDP1-204ENST00000605847 MED20Q9H944 212 aa12.11□□□□□ -0.47
NEDD8-MDP1-204ENST00000605847 HUWE1Q7Z6Z7 4374 aaKnown RBP12.11□□□□□ -0.47
NEDD8-MDP1-204ENST00000605847 FAM172BPA6NC97 362 aa12.1□□□□□ -0.47
NEDD8-MDP1-204ENST00000605847 MMP23AO75900 390 aa12.1□□□□□ -0.47
NEDD8-MDP1-204ENST00000605847 FABP3P05413 133 aa12.1□□□□□ -0.47
NEDD8-MDP1-204ENST00000605847 GABRR1P24046 479 aa12.1□□□□□ -0.47
NEDD8-MDP1-204ENST00000605847 ESRRGP62508 458 aa12.1□□□□□ -0.47
NEDD8-MDP1-204ENST00000605847 HES1Q14469 280 aa12.1□□□□□ -0.47
NEDD8-MDP1-204ENST00000605847 RBM39Q14498 530 aaKnown RBP12.1□□□□□ -0.47
NEDD8-MDP1-204ENST00000605847 KIR2DS1Q14954 304 aa12.1□□□□□ -0.47
NEDD8-MDP1-204ENST00000605847 GRK1Q15835 563 aa12.1□□□□□ -0.47
NEDD8-MDP1-204ENST00000605847 CXorf66Q5JRM2 361 aaPredicted RBP12.1□□□□□ -0.47
NEDD8-MDP1-204ENST00000605847 TPTE2P1Q5T6R2 138 aa12.1□□□□□ -0.47
NEDD8-MDP1-204ENST00000605847 SLX4IPQ5VYV7 408 aa12.1□□□□□ -0.47
NEDD8-MDP1-204ENST00000605847 KRT77Q7Z794 578 aa12.1□□□□□ -0.47
NEDD8-MDP1-204ENST00000605847 STPG2Q8N412 459 aa12.1□□□□□ -0.47
NEDD8-MDP1-204ENST00000605847 PYURFQ96I23 114 aa12.1□□□□□ -0.47
NEDD8-MDP1-204ENST00000605847 GAL3ST2Q9H3Q3 398 aa12.1□□□□□ -0.47
NEDD8-MDP1-204ENST00000605847 IL1RAPQ9NPH3 570 aa12.1□□□□□ -0.47
NEDD8-MDP1-204ENST00000605847 GPR173Q9NS66 373 aa12.1□□□□□ -0.47
NEDD8-MDP1-204ENST00000605847 GLS2Q9UI32 602 aa12.1□□□□□ -0.47
NEDD8-MDP1-204ENST00000605847 TMEM269A0A1B0GVZ9 245 aa12.09□□□□□ -0.47
NEDD8-MDP1-204ENST00000605847 FAM183AA6NL82 134 aa12.09□□□□□ -0.47
NEDD8-MDP1-204ENST00000605847 OOSP1A8MZH6 123 aa12.09□□□□□ -0.47
NEDD8-MDP1-204ENST00000605847 RPLP1P05386 114 aaKnown RBP12.09□□□□□ -0.47
NEDD8-MDP1-204ENST00000605847 PRRX1P54821 245 aa12.09□□□□□ -0.47
NEDD8-MDP1-204ENST00000605847 ERVK11-1P61568 191 aa12.09□□□□□ -0.47
NEDD8-MDP1-204ENST00000605847 SF3A3Q12874 501 aaKnown RBP eCLIP12.09□□□□□ -0.472e-6■■■□□ 18.6
NEDD8-MDP1-204ENST00000605847 CLVS2Q5SYC1 327 aa12.09□□□□□ -0.47
NEDD8-MDP1-204ENST00000605847 PRAMEF5Q5TYX0 476 aa12.09□□□□□ -0.47
NEDD8-MDP1-204ENST00000605847 TRPM8Q7Z2W7 1104 aa12.09□□□□□ -0.47
NEDD8-MDP1-204ENST00000605847 DRAM1Q8N682 238 aa12.09□□□□□ -0.47
NEDD8-MDP1-204ENST00000605847 OR9Q2Q8NGE9 314 aa12.09□□□□□ -0.47
NEDD8-MDP1-204ENST00000605847 OR51E1Q8TCB6 317 aa12.09□□□□□ -0.47
NEDD8-MDP1-204ENST00000605847 GON7Q9BXV9 100 aa12.09□□□□□ -0.47
NEDD8-MDP1-204ENST00000605847 CHST6Q9GZX3 395 aa12.09□□□□□ -0.47
NEDD8-MDP1-204ENST00000605847 OR51V1Q9H2C8 321 aa12.09□□□□□ -0.47
NEDD8-MDP1-204ENST00000605847 GPR84Q9NQS5 396 aa12.09□□□□□ -0.47
NEDD8-MDP1-204ENST00000605847 UBE2J1Q9Y385 318 aaPredicted RBP12.09□□□□□ -0.47
NEDD8-MDP1-204ENST00000605847 PQLC2LA1A4F0 135 aa12.08□□□□□ -0.48
NEDD8-MDP1-204ENST00000605847 ACOD1A6NK06 481 aa12.08□□□□□ -0.48
NEDD8-MDP1-204ENST00000605847 BUB1B-PAK6H3BSN5 160 aa12.08□□□□□ -0.48
NEDD8-MDP1-204ENST00000605847 SELENOFO60613 162 aa12.08□□□□□ -0.48
NEDD8-MDP1-204ENST00000605847 IGLV1-47P01700 117 aa12.08□□□□□ -0.48
NEDD8-MDP1-204ENST00000605847 TMEM11P17152 192 aa12.08□□□□□ -0.48
NEDD8-MDP1-204ENST00000605847 CDK2P24941 298 aa12.08□□□□□ -0.48
NEDD8-MDP1-204ENST00000605847 MPZP25189 248 aa12.08□□□□□ -0.48
NEDD8-MDP1-204ENST00000605847 CDX1P47902 265 aaPredicted RBP12.08□□□□□ -0.48
NEDD8-MDP1-204ENST00000605847 PNLIPRP3Q17RR3 467 aa12.08□□□□□ -0.48
NEDD8-MDP1-204ENST00000605847 HLA-DRB5Q30154 266 aa12.08□□□□□ -0.48
NEDD8-MDP1-204ENST00000605847 ANGPTL5Q86XS5 388 aa12.08□□□□□ -0.48
NEDD8-MDP1-204ENST00000605847 THNSL2Q86YJ6 484 aa12.08□□□□□ -0.48
NEDD8-MDP1-204ENST00000605847 C5orf56Q8N8D9 126 aa12.08□□□□□ -0.48
NEDD8-MDP1-204ENST00000605847 RNFT2Q96EX2 444 aa12.08□□□□□ -0.48
NEDD8-MDP1-204ENST00000605847 BTBD10Q9BSF8 475 aa12.08□□□□□ -0.48
NEDD8-MDP1-204ENST00000605847 PKIBQ9C010 78 aa12.08□□□□□ -0.48
NEDD8-MDP1-204ENST00000605847 PBOV1Q9GZY1 135 aa12.08□□□□□ -0.48
NEDD8-MDP1-204ENST00000605847 PCDHB16Q9NRJ7 776 aa12.08□□□□□ -0.48
NEDD8-MDP1-204ENST00000605847 CMC2Q9NRP2 79 aa12.08□□□□□ -0.48
NEDD8-MDP1-204ENST00000605847 ARMC1Q9NVT9 282 aa12.08□□□□□ -0.48
NEDD8-MDP1-204ENST00000605847 TAS2R1Q9NYW7 299 aa12.08□□□□□ -0.48
NEDD8-MDP1-204ENST00000605847 CSMD3Q7Z407 3707 aa12.07□□□□□ -0.48
NEDD8-MDP1-204ENST00000605847 TRGV10A0A0A0MS01 117 aa12.07□□□□□ -0.48
NEDD8-MDP1-204ENST00000605847 TMEM82A0PJX8 343 aa12.07□□□□□ -0.48
NEDD8-MDP1-204ENST00000605847 DLGAP1O14490 977 aa12.07□□□□□ -0.48
NEDD8-MDP1-204ENST00000605847 FGF16O43320 207 aa12.07□□□□□ -0.48
NEDD8-MDP1-204ENST00000605847 DHRS3O75911 302 aa12.07□□□□□ -0.48
NEDD8-MDP1-204ENST00000605847 INMTO95050 263 aa12.07□□□□□ -0.48
NEDD8-MDP1-204ENST00000605847 SOX14O95416 240 aa12.07□□□□□ -0.48
NEDD8-MDP1-204ENST00000605847 GASTP01350 101 aa12.07□□□□□ -0.48
NEDD8-MDP1-204ENST00000605847 IGHG2P01859 326 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms