RNA–Protein interactions for RNA: ENST00000604164.5

CCDC12-209, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 399 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-209ENST00000604164 ISG20L2Q9H9L3 353 aaKnown RBP9.52□□□□□ -0.89
CCDC12-209ENST00000604164 SEBOXQ9HB31 216 aaPredicted RBP9.52□□□□□ -0.89
CCDC12-209ENST00000604164 ESM1Q9NQ30 184 aa9.52□□□□□ -0.89
CCDC12-209ENST00000604164 OR14J1Q9UGF5 321 aa9.52□□□□□ -0.89
CCDC12-209ENST00000604164 FAM96BQ9Y3D0 163 aa9.52□□□□□ -0.89
CCDC12-209ENST00000604164 MAB21L2Q9Y586 359 aa9.52□□□□□ -0.89
CCDC12-209ENST00000604164 TMEM89A2RUT3 159 aa9.51□□□□□ -0.89
CCDC12-209ENST00000604164 ZFPL1O95159 310 aa9.51□□□□□ -0.89
CCDC12-209ENST00000604164 RNASE1P07998 156 aaKnown RBP9.51□□□□□ -0.89
CCDC12-209ENST00000604164 LIMS3P0CW19 117 aa9.51□□□□□ -0.89
CCDC12-209ENST00000604164 LIMS4P0CW20 117 aa9.51□□□□□ -0.89
CCDC12-209ENST00000604164 PIPP12273 146 aaPredicted RBP9.51□□□□□ -0.89
CCDC12-209ENST00000604164 SELLP14151 372 aa9.51□□□□□ -0.89
CCDC12-209ENST00000604164 POU3F4P49335 361 aa9.51□□□□□ -0.89
CCDC12-209ENST00000604164 COMPP49747 757 aaPredicted RBP9.51□□□□□ -0.89
CCDC12-209ENST00000604164 FOXL1Q12952 345 aa9.51□□□□□ -0.89
CCDC12-209ENST00000604164 SMN1Q16637 294 aaKnown RBP9.51□□□□□ -0.89
CCDC12-209ENST00000604164 DEFB112Q30KQ8 113 aa9.51□□□□□ -0.89
CCDC12-209ENST00000604164 SPIN3Q5JUX0 258 aa9.51□□□□□ -0.89
CCDC12-209ENST00000604164 SAXO1Q8IYX7 474 aa9.51□□□□□ -0.89
CCDC12-209ENST00000604164 FAM185AQ8N0U4 392 aa9.51□□□□□ -0.89
CCDC12-209ENST00000604164 PARP16Q8N5Y8 322 aa9.51□□□□□ -0.89
CCDC12-209ENST00000604164 CD177Q8N6Q3 437 aa9.51□□□□□ -0.89
CCDC12-209ENST00000604164 ZSCAN4Q8NAM6 433 aaPredicted RBP9.51□□□□□ -0.89
CCDC12-209ENST00000604164 PPP1R35Q8TAP8 253 aa9.51□□□□□ -0.89
CCDC12-209ENST00000604164 GPR148Q8TDV2 347 aa9.51□□□□□ -0.89
CCDC12-209ENST00000604164 SSMEM1Q8WWF3 244 aa9.51□□□□□ -0.89
CCDC12-209ENST00000604164 EMG1Q92979 244 aaKnown RBP9.51□□□□□ -0.89
CCDC12-209ENST00000604164 SLAMF9Q96A28 289 aa9.51□□□□□ -0.89
CCDC12-209ENST00000604164 ZNF649Q9BS31 505 aa9.51□□□□□ -0.89
CCDC12-209ENST00000604164 VCX3BQ9H321 246 aa9.51□□□□□ -0.89
CCDC12-209ENST00000604164 UNKLQ9H9P5 680 aaKnown RBP9.51□□□□□ -0.89
CCDC12-209ENST00000604164 MTCH1Q9NZJ7 389 aa9.51□□□□□ -0.89
CCDC12-209ENST00000604164 CNOT2Q9NZN8 540 aaKnown RBP9.51□□□□□ -0.89
CCDC12-209ENST00000604164 POMT1Q9Y6A1 747 aa9.51□□□□□ -0.89
CCDC12-209ENST00000604164 SVEP1Q4LDE5 3571 aa9.5□□□□□ -0.89
CCDC12-209ENST00000604164 CUBNO60494 3623 aa9.5□□□□□ -0.89
CCDC12-209ENST00000604164 IGKV1-27A0A075B6S5 117 aa9.5□□□□□ -0.89
CCDC12-209ENST00000604164 IGKV1-9A0A0C4DH69 117 aa9.5□□□□□ -0.89
CCDC12-209ENST00000604164 K7N7A8 449 aa9.5□□□□□ -0.89
CCDC12-209ENST00000604164 HAX1O00165 279 aa9.5□□□□□ -0.89
CCDC12-209ENST00000604164 SULT1B1O43704 296 aa9.5□□□□□ -0.89
CCDC12-209ENST00000604164 CLIC3O95833 236 aa9.5□□□□□ -0.89
CCDC12-209ENST00000604164 TK1P04183 234 aa9.5□□□□□ -0.89
CCDC12-209ENST00000604164 CRYBA1P05813 215 aa9.5□□□□□ -0.89
CCDC12-209ENST00000604164 HCKP08631 526 aa9.5□□□□□ -0.89
CCDC12-209ENST00000604164 BMXP51813 675 aa9.5□□□□□ -0.89
CCDC12-209ENST00000604164 TAS2R43P59537 309 aa9.5□□□□□ -0.89
CCDC12-209ENST00000604164 RPL15P61313 204 aaKnown RBP9.5□□□□□ -0.89
CCDC12-209ENST00000604164 SLC34A1Q06495 639 aa9.5□□□□□ -0.89
CCDC12-209ENST00000604164 ACSM1Q08AH1 577 aa9.5□□□□□ -0.89
CCDC12-209ENST00000604164 PDZK1IP1Q13113 114 aa9.5□□□□□ -0.89
CCDC12-209ENST00000604164 SLC9A3R2Q15599 337 aa9.5□□□□□ -0.89
CCDC12-209ENST00000604164 Q6YL49 198 aa9.5□□□□□ -0.89
CCDC12-209ENST00000604164 GDPD3Q7L5L3 318 aa9.5□□□□□ -0.89
CCDC12-209ENST00000604164 FAM58AQ8N1B3 248 aa9.5□□□□□ -0.89
CCDC12-209ENST00000604164 FGFRL1Q8N441 504 aa9.5□□□□□ -0.89
CCDC12-209ENST00000604164 ASCC1Q8N9N2 400 aaKnown RBP9.5□□□□□ -0.89
CCDC12-209ENST00000604164 OR51A4Q8NGJ6 313 aa9.5□□□□□ -0.89
CCDC12-209ENST00000604164 OR13C9Q8NGT0 318 aa9.5□□□□□ -0.89
CCDC12-209ENST00000604164 OR52N1Q8NH53 320 aa9.5□□□□□ -0.89
CCDC12-209ENST00000604164 ZNF48Q96MX3 618 aaPredicted RBP9.5□□□□□ -0.89
CCDC12-209ENST00000604164 PDCD1LG2Q9BQ51 273 aa9.5□□□□□ -0.89
CCDC12-209ENST00000604164 DPAGT1Q9H3H5 408 aa9.5□□□□□ -0.89
CCDC12-209ENST00000604164 HEXA-AS1Q9H8Q6 139 aa9.5□□□□□ -0.89
CCDC12-209ENST00000604164 BABAM2Q9NXR7 383 aa9.5□□□□□ -0.89
CCDC12-209ENST00000604164 SF3B6Q9Y3B4 125 aaKnown RBP9.5□□□□□ -0.89
CCDC12-209ENST00000604164 FUOMA2VDF0 154 aa9.49□□□□□ -0.89
CCDC12-209ENST00000604164 BTBD17A6NE02 478 aa9.49□□□□□ -0.89
CCDC12-209ENST00000604164 ANKRD65E5RJM6 399 aa9.49□□□□□ -0.89
CCDC12-209ENST00000604164 E9PI62 339 aa9.49□□□□□ -0.89
CCDC12-209ENST00000604164 H0YJX3 145 aa9.49□□□□□ -0.89
CCDC12-209ENST00000604164 SH2D1BO14796 132 aa9.49□□□□□ -0.89
CCDC12-209ENST00000604164 NPFFO15130 113 aa9.49□□□□□ -0.89
CCDC12-209ENST00000604164 PAHP00439 452 aa9.49□□□□□ -0.89
CCDC12-209ENST00000604164 TFF1P04155 84 aa9.49□□□□□ -0.89
CCDC12-209ENST00000604164 FBP1P09467 338 aa9.49□□□□□ -0.89
CCDC12-209ENST00000604164 HKR1P10072 659 aa9.49□□□□□ -0.89
CCDC12-209ENST00000604164 RAB3AP20336 220 aa9.49□□□□□ -0.89
CCDC12-209ENST00000604164 ETV1P50549 477 aa9.49□□□□□ -0.89
CCDC12-209ENST00000604164 UBE2E1P51965 193 aa9.49□□□□□ -0.89
CCDC12-209ENST00000604164 PPP3R1P63098 170 aa9.49□□□□□ -0.89
CCDC12-209ENST00000604164 COL10A1Q03692 680 aa9.49□□□□□ -0.89
CCDC12-209ENST00000604164 ST3GAL4Q11206 333 aa9.49□□□□□ -0.89
CCDC12-209ENST00000604164 CDK5R1Q15078 307 aa9.49□□□□□ -0.89
CCDC12-209ENST00000604164 RUSC1-AS1Q66K80 236 aa9.49□□□□□ -0.89
CCDC12-209ENST00000604164 C16orf87Q6PH81 154 aa9.49□□□□□ -0.89
CCDC12-209ENST00000604164 OR8H2Q8N162 312 aa9.49□□□□□ -0.89
CCDC12-209ENST00000604164 STX19Q8N4C7 294 aa9.49□□□□□ -0.89
CCDC12-209ENST00000604164 C3orf56Q8N813 242 aa9.49□□□□□ -0.89
CCDC12-209ENST00000604164 OR10AC1Q8NH08 325 aa9.49□□□□□ -0.89
CCDC12-209ENST00000604164 SMIM19Q96E16 107 aa9.49□□□□□ -0.89
CCDC12-209ENST00000604164 SNX22Q96L94 193 aa9.49□□□□□ -0.89
CCDC12-209ENST00000604164 ELL3Q9HB65 397 aaPredicted RBP9.49□□□□□ -0.89
CCDC12-209ENST00000604164 SIRT7Q9NRC8 400 aa9.49□□□□□ -0.89
CCDC12-209ENST00000604164 PLCXD1Q9NUJ7 323 aa9.49□□□□□ -0.89
CCDC12-209ENST00000604164 OGG1O15527 345 aa9.48□□□□□ -0.89
CCDC12-209ENST00000604164 HOXA3O43365 443 aaPredicted RBP9.48□□□□□ -0.89
CCDC12-209ENST00000604164 KDM4BO94953 1096 aa9.48□□□□□ -0.89
CCDC12-209ENST00000604164 HAND1O96004 215 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms