RNA–Protein interactions for RNA: ENST00000602574.5

COMMD3-215, Transcript of COMM domain containing 3, humanhuman

TSL 1 (best)

Gene COMMD3, Length 2,290 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-215ENST00000602574 GDF5P43026 501 aa7.78□□□□□ -1.16
COMMD3-215ENST00000602574 GPM6AP51674 278 aa7.78□□□□□ -1.16
COMMD3-215ENST00000602574 RPS14P62263 151 aaKnown RBP7.78□□□□□ -1.16
COMMD3-215ENST00000602574 HIST1H1AQ02539 215 aaPredicted RBP7.78□□□□□ -1.16
COMMD3-215ENST00000602574 GABRA6Q16445 453 aa7.78□□□□□ -1.16
COMMD3-215ENST00000602574 MRPL54Q6P161 138 aaKnown RBP7.78□□□□□ -1.16
COMMD3-215ENST00000602574 LCNL1Q6ZST4 164 aa7.78□□□□□ -1.16
COMMD3-215ENST00000602574 OR4D11Q8NGI4 311 aa7.78□□□□□ -1.16
COMMD3-215ENST00000602574 CMTM2Q8TAZ6 248 aa7.78□□□□□ -1.16
COMMD3-215ENST00000602574 TBX5Q99593 518 aa7.78□□□□□ -1.16
COMMD3-215ENST00000602574 ORAI3Q9BRQ5 295 aa7.78□□□□□ -1.16
COMMD3-215ENST00000602574 RTN4RQ9BZR6 473 aa7.78□□□□□ -1.16
COMMD3-215ENST00000602574 MRPS33Q9Y291 106 aaKnown RBP7.78□□□□□ -1.16
COMMD3-215ENST00000602574 MSGN1A6NI15 193 aa7.78□□□□□ -1.16
COMMD3-215ENST00000602574 HHLA1C9JL84 531 aa7.78□□□□□ -1.16
COMMD3-215ENST00000602574 H0YIZ8 118 aa7.78□□□□□ -1.16
COMMD3-215ENST00000602574 FUT1P19526 365 aa7.78□□□□□ -1.16
COMMD3-215ENST00000602574 ADCYAP1R1P41586 468 aa7.78□□□□□ -1.16
COMMD3-215ENST00000602574 B4GALNT1Q00973 533 aa7.78□□□□□ -1.16
COMMD3-215ENST00000602574 LAMTOR4Q0VGL1 99 aa7.78□□□□□ -1.16
COMMD3-215ENST00000602574 ZNF266Q14584 549 aa7.78□□□□□ -1.16
COMMD3-215ENST00000602574 WDR25Q64LD2 544 aaPredicted RBP7.78□□□□□ -1.16
COMMD3-215ENST00000602574 PWWP2BQ6NUJ5 590 aa7.78□□□□□ -1.16
COMMD3-215ENST00000602574 TMEM173Q86WV6 379 aaPredicted RBP7.78□□□□□ -1.16
COMMD3-215ENST00000602574 ARHGEF39Q8N4T4 335 aa7.78□□□□□ -1.16
COMMD3-215ENST00000602574 CSNK1A1LQ8N752 337 aa7.78□□□□□ -1.16
COMMD3-215ENST00000602574 ZIC4Q8N9L1 334 aa7.78□□□□□ -1.16
COMMD3-215ENST00000602574 CLEC1AQ8NC01 280 aa7.78□□□□□ -1.16
COMMD3-215ENST00000602574 TSTD1Q8NFU3 115 aa7.78□□□□□ -1.16
COMMD3-215ENST00000602574 CADM4Q8NFZ8 388 aa7.78□□□□□ -1.16
COMMD3-215ENST00000602574 OR4F17Q8NGA8 305 aa7.78□□□□□ -1.16
COMMD3-215ENST00000602574 RERGQ96A58 199 aaPredicted RBP7.78□□□□□ -1.16
COMMD3-215ENST00000602574 STARD4Q96DR4 205 aa7.78□□□□□ -1.16
COMMD3-215ENST00000602574 OR4F4Q96R69 305 aa7.78□□□□□ -1.16
COMMD3-215ENST00000602574 MED20Q9H944 212 aa7.78□□□□□ -1.16
COMMD3-215ENST00000602574 GCM1Q9NP62 436 aa7.78□□□□□ -1.16
COMMD3-215ENST00000602574 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.78□□□□□ -1.16
COMMD3-215ENST00000602574 HSPB8Q9UJY1 196 aa7.78□□□□□ -1.16
COMMD3-215ENST00000602574 LCTP09848 1927 aa7.78□□□□□ -1.16
COMMD3-215ENST00000602574 HCRTO43612 131 aa7.77□□□□□ -1.17
COMMD3-215ENST00000602574 GCM2O75603 506 aaPredicted RBP7.77□□□□□ -1.17
COMMD3-215ENST00000602574 REG1AP05451 166 aa7.77□□□□□ -1.17
COMMD3-215ENST00000602574 PTGER1P34995 402 aa7.77□□□□□ -1.17
COMMD3-215ENST00000602574 SOAT1P35610 550 aa7.77□□□□□ -1.17
COMMD3-215ENST00000602574 GUCA1AP43080 201 aaPredicted RBP7.77□□□□□ -1.17
COMMD3-215ENST00000602574 YPEL3P61236 119 aaPredicted RBP7.77□□□□□ -1.17
COMMD3-215ENST00000602574 OLIG2Q13516 323 aa7.77□□□□□ -1.17
COMMD3-215ENST00000602574 POU2AF1Q16633 256 aa7.77□□□□□ -1.17
COMMD3-215ENST00000602574 PCK2Q16822 640 aa7.77□□□□□ -1.17
COMMD3-215ENST00000602574 ZNF791Q3KP31 576 aaPredicted RBP7.77□□□□□ -1.17
COMMD3-215ENST00000602574 AMZ1Q400G9 498 aa7.77□□□□□ -1.17
COMMD3-215ENST00000602574 ASCL4Q6XD76 172 aa7.77□□□□□ -1.17
COMMD3-215ENST00000602574 IQCF1Q8N6M8 205 aa7.77□□□□□ -1.17
COMMD3-215ENST00000602574 OR2AE1Q8NHA4 323 aa7.77□□□□□ -1.17
COMMD3-215ENST00000602574 UHRF2Q96PU4 802 aa7.77□□□□□ -1.17
COMMD3-215ENST00000602574 RSPO3Q9BXY4 272 aaPredicted RBP7.77□□□□□ -1.17
COMMD3-215ENST00000602574 CHRNA10Q9GZZ6 450 aa7.77□□□□□ -1.17
COMMD3-215ENST00000602574 MFSD1Q9H3U5 465 aa7.77□□□□□ -1.17
COMMD3-215ENST00000602574 SYNPO2LQ9H987 977 aa7.77□□□□□ -1.17
COMMD3-215ENST00000602574 ANKRD10Q9NXR5 420 aa7.77□□□□□ -1.17
COMMD3-215ENST00000602574 MCTS1Q9ULC4 181 aaKnown RBP7.77□□□□□ -1.17
COMMD3-215ENST00000602574 GAGE10A6NGK3 116 aa7.77□□□□□ -1.17
COMMD3-215ENST00000602574 H0Y980 276 aa7.77□□□□□ -1.17
COMMD3-215ENST00000602574 SIRPB1O00241 398 aa7.77□□□□□ -1.17
COMMD3-215ENST00000602574 RCBTB2O95199 551 aa7.77□□□□□ -1.17
COMMD3-215ENST00000602574 TMEM50AO95807 157 aa7.77□□□□□ -1.17
COMMD3-215ENST00000602574 IFNW1P05000 195 aa7.77□□□□□ -1.17
COMMD3-215ENST00000602574 PRPH2P23942 346 aa7.77□□□□□ -1.17
COMMD3-215ENST00000602574 CDK2P24941 298 aa7.77□□□□□ -1.17
COMMD3-215ENST00000602574 AMTP48728 403 aa7.77□□□□□ -1.17
COMMD3-215ENST00000602574 DNASE1L1P49184 302 aa7.77□□□□□ -1.17
COMMD3-215ENST00000602574 TAS2R50P59544 299 aa7.77□□□□□ -1.17
COMMD3-215ENST00000602574 GNB2P62879 340 aa7.77□□□□□ -1.17
COMMD3-215ENST00000602574 SNRPNP63162 240 aaKnown RBP7.77□□□□□ -1.17
COMMD3-215ENST00000602574 LCN2P80188 198 aa7.77□□□□□ -1.17
COMMD3-215ENST00000602574 ENTPD8Q5MY95 495 aa7.77□□□□□ -1.17
COMMD3-215ENST00000602574 SP5Q6BEB4 398 aaPredicted RBP7.77□□□□□ -1.17
COMMD3-215ENST00000602574 DMKNQ6E0U4 476 aaPredicted RBP7.77□□□□□ -1.17
COMMD3-215ENST00000602574 DPPA3Q6W0C5 159 aa7.77□□□□□ -1.17
COMMD3-215ENST00000602574 Q7L0L9 218 aa7.77□□□□□ -1.17
COMMD3-215ENST00000602574 WDR5BQ86VZ2 330 aa7.77□□□□□ -1.17
COMMD3-215ENST00000602574 Q8N976 141 aa7.77□□□□□ -1.17
COMMD3-215ENST00000602574 OR5AR1Q8NGP9 310 aa7.77□□□□□ -1.17
COMMD3-215ENST00000602574 IL22RA2Q969J5 263 aa7.77□□□□□ -1.17
COMMD3-215ENST00000602574 PGLYRP3Q96LB9 341 aa7.77□□□□□ -1.17
COMMD3-215ENST00000602574 RASL10BQ96S79 203 aa7.77□□□□□ -1.17
COMMD3-215ENST00000602574 GPA33Q99795 319 aa7.77□□□□□ -1.17
COMMD3-215ENST00000602574 LPAR5Q9H1C0 372 aa7.77□□□□□ -1.17
COMMD3-215ENST00000602574 TXNIPQ9H3M7 391 aa7.77□□□□□ -1.17
COMMD3-215ENST00000602574 HINT3Q9NQE9 182 aaKnown RBP7.77□□□□□ -1.17
COMMD3-215ENST00000602574 THYN1Q9P016 225 aa7.77□□□□□ -1.17
COMMD3-215ENST00000602574 PLXNA3P51805 1871 aa7.76□□□□□ -1.17
COMMD3-215ENST00000602574 PSMB11A5LHX3 300 aa7.76□□□□□ -1.17
COMMD3-215ENST00000602574 OR2T8A6NH00 312 aa7.76□□□□□ -1.17
COMMD3-215ENST00000602574 ZNF207O43670 478 aaKnown RBP7.76□□□□□ -1.17
COMMD3-215ENST00000602574 MMP9P14780 707 aa7.76□□□□□ -1.17
COMMD3-215ENST00000602574 ELAVL4P26378 380 aaKnown RBP7.76□□□□□ -1.17
COMMD3-215ENST00000602574 ADRA1AP35348 466 aa7.76□□□□□ -1.17
COMMD3-215ENST00000602574 ASCL1P50553 236 aa7.76□□□□□ -1.17
COMMD3-215ENST00000602574 SIRPAP78324 504 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms