RNA–Protein interactions for RNA: ENST00000601809.5

IRF3-230, Transcript of interferon regulatory factor 3, humanhuman

TSL 2

Gene IRF3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-230ENST00000601809 M0R1W7 72 aa14.35□□□□□ -0.11
IRF3-230ENST00000601809 OGG1O15527 345 aa14.35□□□□□ -0.11
IRF3-230ENST00000601809 IGKV1D-12P01611 117 aa14.35□□□□□ -0.11
IRF3-230ENST00000601809 CCDC159P0C7I6 412 aa14.35□□□□□ -0.11
IRF3-230ENST00000601809 ZNF20P17024 532 aa14.35□□□□□ -0.11
IRF3-230ENST00000601809 NDUFB7P17568 137 aa14.35□□□□□ -0.11
IRF3-230ENST00000601809 PRKACBP22694 351 aa14.35□□□□□ -0.11
IRF3-230ENST00000601809 NPBWR2P48146 333 aa14.35□□□□□ -0.11
IRF3-230ENST00000601809 ATP1B3P54709 279 aa14.35□□□□□ -0.11
IRF3-230ENST00000601809 DLX1P56177 255 aa14.35□□□□□ -0.11
IRF3-230ENST00000601809 SLC9A3R2Q15599 337 aa14.35□□□□□ -0.11
IRF3-230ENST00000601809 CCDC58Q4VC31 144 aa14.35□□□□□ -0.11
IRF3-230ENST00000601809 HCP5Q6MZN7 132 aa14.35□□□□□ -0.11
IRF3-230ENST00000601809 LHFPL2Q6ZUX7 228 aa14.35□□□□□ -0.11
IRF3-230ENST00000601809 PIP4P2Q8N4L2 257 aa14.35□□□□□ -0.11
IRF3-230ENST00000601809 TMEM185AQ8NFB2 350 aa14.35□□□□□ -0.11
IRF3-230ENST00000601809 OR13C9Q8NGT0 318 aa14.35□□□□□ -0.11
IRF3-230ENST00000601809 OR5AK2Q8NH90 309 aa14.35□□□□□ -0.11
IRF3-230ENST00000601809 H1FXQ92522 213 aaKnown RBP14.35□□□□□ -0.11
IRF3-230ENST00000601809 LHX4Q969G2 390 aa14.35□□□□□ -0.11
IRF3-230ENST00000601809 C19orf12Q9NSK7 152 aa14.35□□□□□ -0.11
IRF3-230ENST00000601809 FKBP14Q9NWM8 211 aa14.35□□□□□ -0.11
IRF3-230ENST00000601809 TRBV2A0A0J9YWF9 115 aa14.34□□□□□ -0.11
IRF3-230ENST00000601809 IRGMA1A4Y4 181 aa14.34□□□□□ -0.11
IRF3-230ENST00000601809 K7N7A8 449 aa14.34□□□□□ -0.11
IRF3-230ENST00000601809 TK1P04183 234 aa14.34□□□□□ -0.11
IRF3-230ENST00000601809 RNASE1P07998 156 aaKnown RBP14.34□□□□□ -0.11
IRF3-230ENST00000601809 RPSAP08865 295 aaKnown RBP14.34□□□□□ -0.11
IRF3-230ENST00000601809 SLC34A1Q06495 639 aa14.34□□□□□ -0.11
IRF3-230ENST00000601809 PDZK1IP1Q13113 114 aa14.34□□□□□ -0.11
IRF3-230ENST00000601809 RPL22L1Q6P5R6 122 aaKnown RBP14.34□□□□□ -0.11
IRF3-230ENST00000601809 C8orf59Q8N0T1 100 aaPredicted RBP14.34□□□□□ -0.11
IRF3-230ENST00000601809 OR52N1Q8NH53 320 aa14.34□□□□□ -0.11
IRF3-230ENST00000601809 TMEM80Q96HE8 168 aa14.34□□□□□ -0.11
IRF3-230ENST00000601809 OPALINQ96PE5 141 aa14.34□□□□□ -0.11
IRF3-230ENST00000601809 DUX5Q96PT3 197 aa14.34□□□□□ -0.11
IRF3-230ENST00000601809 FAM234AQ9H0X4 552 aa14.34□□□□□ -0.11
IRF3-230ENST00000601809 ZCCHC4Q9H5U6 513 aa14.34□□□□□ -0.11
IRF3-230ENST00000601809 ZMAT3Q9HA38 289 aaKnown RBP14.34□□□□□ -0.11
IRF3-230ENST00000601809 SIRT7Q9NRC8 400 aa14.34□□□□□ -0.11
IRF3-230ENST00000601809 CNOT2Q9NZN8 540 aaKnown RBP14.34□□□□□ -0.11
IRF3-230ENST00000601809 ONECUT1Q9UBC0 465 aa14.34□□□□□ -0.11
IRF3-230ENST00000601809 PSORS1C1Q9UIG5 152 aa14.34□□□□□ -0.11
IRF3-230ENST00000601809 EXOSC1Q9Y3B2 195 aaKnown RBP14.34□□□□□ -0.11
IRF3-230ENST00000601809 XPNPEP2O43895 674 aa14.33□□□□□ -0.12
IRF3-230ENST00000601809 MTCP1P56278 107 aa14.33□□□□□ -0.12
IRF3-230ENST00000601809 ZP1P60852 638 aa14.33□□□□□ -0.12
IRF3-230ENST00000601809 COL10A1Q03692 680 aa14.33□□□□□ -0.12
IRF3-230ENST00000601809 PRB3Q04118 309 aaPredicted RBP14.33□□□□□ -0.12
IRF3-230ENST00000601809 BAMBIQ13145 260 aa14.33□□□□□ -0.12
IRF3-230ENST00000601809 ZNF146Q15072 292 aa14.33□□□□□ -0.12
IRF3-230ENST00000601809 DMKNQ6E0U4 476 aaPredicted RBP14.33□□□□□ -0.12
IRF3-230ENST00000601809 Q6YL49 198 aa14.33□□□□□ -0.12
IRF3-230ENST00000601809 GATAD2BQ8WXI9 593 aa14.33□□□□□ -0.12
IRF3-230ENST00000601809 SPACA5Q96QH8 159 aa14.33□□□□□ -0.12
IRF3-230ENST00000601809 COMMD4Q9H0A8 199 aa14.33□□□□□ -0.12
IRF3-230ENST00000601809 RBFOX1Q9NWB1 397 aaKnown RBP14.33□□□□□ -0.12
IRF3-230ENST00000601809 BABAM2Q9NXR7 383 aa14.33□□□□□ -0.12
IRF3-230ENST00000601809 FBN3Q75N90 2809 aa14.33□□□□□ -0.12
IRF3-230ENST00000601809 TMEM82A0PJX8 343 aa14.32□□□□□ -0.12
IRF3-230ENST00000601809 H0YJX3 145 aa14.32□□□□□ -0.12
IRF3-230ENST00000601809 SLC1A7O00341 560 aa14.32□□□□□ -0.12
IRF3-230ENST00000601809 SPRY1O43609 319 aaPredicted RBP14.32□□□□□ -0.12
IRF3-230ENST00000601809 SULT1B1O43704 296 aa14.32□□□□□ -0.12
IRF3-230ENST00000601809 KDM4BO94953 1096 aa14.32□□□□□ -0.12
IRF3-230ENST00000601809 BCL3P20749 454 aa14.32□□□□□ -0.12
IRF3-230ENST00000601809 DLX6P56179 175 aa14.32□□□□□ -0.12
IRF3-230ENST00000601809 ST3GAL4Q11206 333 aa14.32□□□□□ -0.12
IRF3-230ENST00000601809 KLRD1Q13241 179 aa14.32□□□□□ -0.12
IRF3-230ENST00000601809 TMEM200BQ69YZ2 307 aa14.32□□□□□ -0.12
IRF3-230ENST00000601809 RBMS3Q6XE24 437 aaKnown RBP14.32□□□□□ -0.12
IRF3-230ENST00000601809 C17orf107Q6ZR85 190 aa14.32□□□□□ -0.12
IRF3-230ENST00000601809 SERPINA12Q8IW75 414 aa14.32□□□□□ -0.12
IRF3-230ENST00000601809 MKXQ8IYA7 352 aa14.32□□□□□ -0.12
IRF3-230ENST00000601809 Q8IYB0 196 aa14.32□□□□□ -0.12
IRF3-230ENST00000601809 CMTM4Q8IZR5 234 aa14.32□□□□□ -0.12
IRF3-230ENST00000601809 RFT1Q96AA3 541 aa14.32□□□□□ -0.12
IRF3-230ENST00000601809 SMIM19Q96E16 107 aa14.32□□□□□ -0.12
IRF3-230ENST00000601809 PGLYRP3Q96LB9 341 aa14.32□□□□□ -0.12
IRF3-230ENST00000601809 NOX4Q9NPH5 578 aa14.32□□□□□ -0.12
IRF3-230ENST00000601809 OR14J1Q9UGF5 321 aa14.32□□□□□ -0.12
IRF3-230ENST00000601809 A0A0U1RQK1 487 aa14.31□□□□□ -0.12
IRF3-230ENST00000601809 EFCAB10A6NFE3 127 aa14.31□□□□□ -0.12
IRF3-230ENST00000601809 HOXA3O43365 443 aaPredicted RBP14.31□□□□□ -0.12
IRF3-230ENST00000601809 ANGPTL7O43827 346 aa14.31□□□□□ -0.12
IRF3-230ENST00000601809 CHRM2P08172 466 aa14.31□□□□□ -0.12
IRF3-230ENST00000601809 MELTFP08582 738 aa14.31□□□□□ -0.12
IRF3-230ENST00000601809 HKR1P10072 659 aa14.31□□□□□ -0.12
IRF3-230ENST00000601809 POU3F4P49335 361 aa14.31□□□□□ -0.12
IRF3-230ENST00000601809 AQP4P55087 323 aa14.31□□□□□ -0.12
IRF3-230ENST00000601809 RPS11P62280 158 aaKnown RBP eCLIP14.31□□□□□ -0.12
IRF3-230ENST00000601809 ZNF273Q14593 569 aa14.31□□□□□ -0.12
IRF3-230ENST00000601809 TMPRSS11AQ6ZMR5 421 aa14.31□□□□□ -0.12
IRF3-230ENST00000601809 TCF23Q7RTU1 214 aa14.31□□□□□ -0.12
IRF3-230ENST00000601809 LDLRAD3Q86YD5 345 aa14.31□□□□□ -0.12
IRF3-230ENST00000601809 SAXO1Q8IYX7 474 aa14.31□□□□□ -0.12
IRF3-230ENST00000601809 FAM58AQ8N1B3 248 aa14.31□□□□□ -0.12
IRF3-230ENST00000601809 OR52N4Q8NGI2 321 aa14.31□□□□□ -0.12
IRF3-230ENST00000601809 OR51A2Q8NGJ7 313 aa14.31□□□□□ -0.12
IRF3-230ENST00000601809 OR5D14Q8NGL3 314 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms