RNA–Protein interactions for RNA: ENST00000600274.5

ARHGEF1-220, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 3,439 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-220ENST00000600274 RBMXP38159 391 aaKnown RBP10.03□□□□□ -0.8
ARHGEF1-220ENST00000600274 GSK3AP49840 483 aa10.03□□□□□ -0.8
ARHGEF1-220ENST00000600274 KCNMB1Q16558 191 aa10.03□□□□□ -0.8
ARHGEF1-220ENST00000600274 ABCA11PQ4W5N1 156 aa10.03□□□□□ -0.8
ARHGEF1-220ENST00000600274 DRAM2Q6UX65 266 aa10.03□□□□□ -0.8
ARHGEF1-220ENST00000600274 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.03□□□□□ -0.8
ARHGEF1-220ENST00000600274 OR56B2PQ8NGI1 322 aa10.03□□□□□ -0.8
ARHGEF1-220ENST00000600274 MITD1Q8WV92 249 aa10.03□□□□□ -0.8
ARHGEF1-220ENST00000600274 IER2Q9BTL4 223 aa10.03□□□□□ -0.8
ARHGEF1-220ENST00000600274 HMSDA8MTL9 139 aa10.02□□□□□ -0.81
ARHGEF1-220ENST00000600274 BET1O15155 118 aa10.02□□□□□ -0.81
ARHGEF1-220ENST00000600274 CNR1P21554 472 aa10.02□□□□□ -0.81
ARHGEF1-220ENST00000600274 NFYBP25208 207 aa10.02□□□□□ -0.81
ARHGEF1-220ENST00000600274 CFPP27918 469 aa10.02□□□□□ -0.81
ARHGEF1-220ENST00000600274 MECP2P51608 486 aaKnown RBP10.02□□□□□ -0.81
ARHGEF1-220ENST00000600274 ARG2P78540 354 aa10.02□□□□□ -0.81
ARHGEF1-220ENST00000600274 ANKRD55Q3KP44 614 aa10.02□□□□□ -0.81
ARHGEF1-220ENST00000600274 TMEM128Q5BJH2 165 aa10.02□□□□□ -0.81
ARHGEF1-220ENST00000600274 SLC22A25Q6T423 547 aa10.02□□□□□ -0.81
ARHGEF1-220ENST00000600274 MEX3BQ6ZN04 569 aaKnown RBP10.02□□□□□ -0.81
ARHGEF1-220ENST00000600274 CPEB3Q8NE35 698 aaKnown RBP10.02□□□□□ -0.81
ARHGEF1-220ENST00000600274 OR5L1Q8NGL2 311 aa10.02□□□□□ -0.81
ARHGEF1-220ENST00000600274 STOML3Q8TAV4 291 aa10.02□□□□□ -0.81
ARHGEF1-220ENST00000600274 UBALD1Q8TB05 177 aa10.02□□□□□ -0.81
ARHGEF1-220ENST00000600274 ALX4Q9H161 411 aaPredicted RBP10.02□□□□□ -0.81
ARHGEF1-220ENST00000600274 AK3Q9UIJ7 227 aa10.02□□□□□ -0.81
ARHGEF1-220ENST00000600274 SYNGR3O43761 229 aa10.02□□□□□ -0.81
ARHGEF1-220ENST00000600274 NEURL1O76050 574 aa10.02□□□□□ -0.81
ARHGEF1-220ENST00000600274 PSMB6P28072 239 aa10.02□□□□□ -0.81
ARHGEF1-220ENST00000600274 CBX5P45973 191 aa10.02□□□□□ -0.81
ARHGEF1-220ENST00000600274 NPBWR2P48146 333 aa10.02□□□□□ -0.81
ARHGEF1-220ENST00000600274 GPM6AP51674 278 aa10.02□□□□□ -0.81
ARHGEF1-220ENST00000600274 CNN3Q15417 329 aaKnown RBP10.02□□□□□ -0.81
ARHGEF1-220ENST00000600274 KIAA2026Q5HYC2 2103 aa10.02□□□□□ -0.81
ARHGEF1-220ENST00000600274 SPIN3Q5JUX0 258 aa10.02□□□□□ -0.81
ARHGEF1-220ENST00000600274 MRPL21Q7Z2W9 205 aaKnown RBP10.02□□□□□ -0.81
ARHGEF1-220ENST00000600274 HOGA1Q86XE5 327 aa10.02□□□□□ -0.81
ARHGEF1-220ENST00000600274 LINC00518Q8N0U6 118 aa10.02□□□□□ -0.81
ARHGEF1-220ENST00000600274 ZDHHC22Q8N966 263 aa10.02□□□□□ -0.81
ARHGEF1-220ENST00000600274 CPNE4Q96A23 557 aaPredicted RBP10.02□□□□□ -0.81
ARHGEF1-220ENST00000600274 SULT4A1Q9BR01 284 aa10.02□□□□□ -0.81
ARHGEF1-220ENST00000600274 TTTY12Q9BZ98 90 aa10.02□□□□□ -0.81
ARHGEF1-220ENST00000600274 DIDO1Q9BTC0 2240 aaKnown RBP10.02□□□□□ -0.81
ARHGEF1-220ENST00000600274 CADP27708 2225 aa10.02□□□□□ -0.81
ARHGEF1-220ENST00000600274 A0A0U1RQV5 110 aa10.01□□□□□ -0.81
ARHGEF1-220ENST00000600274 LOC102725191A0A1B0GVB3 256 aa10.01□□□□□ -0.81
ARHGEF1-220ENST00000600274 NXPH3O95157 252 aa10.01□□□□□ -0.81
ARHGEF1-220ENST00000600274 DUS4LO95620 317 aaKnown RBP10.01□□□□□ -0.81
ARHGEF1-220ENST00000600274 NGFP01138 241 aa10.01□□□□□ -0.81
ARHGEF1-220ENST00000600274 MELTFP08582 738 aa10.01□□□□□ -0.81
ARHGEF1-220ENST00000600274 OR5H8P0DN80 308 aa10.01□□□□□ -0.81
ARHGEF1-220ENST00000600274 PPIAP62937 165 aaKnown RBP10.01□□□□□ -0.81
ARHGEF1-220ENST00000600274 PDZK1IP1Q13113 114 aa10.01□□□□□ -0.81
ARHGEF1-220ENST00000600274 SRSF6Q13247 344 aaKnown RBP10.01□□□□□ -0.81
ARHGEF1-220ENST00000600274 SMCO1Q147U7 214 aa10.01□□□□□ -0.81
ARHGEF1-220ENST00000600274 SHEQ5VZ18 495 aa10.01□□□□□ -0.81
ARHGEF1-220ENST00000600274 ZNF529Q6P280 563 aa10.01□□□□□ -0.81
ARHGEF1-220ENST00000600274 PRR18Q8N4B5 295 aa10.01□□□□□ -0.81
ARHGEF1-220ENST00000600274 TMEM251Q8N6I4 163 aa10.01□□□□□ -0.81
ARHGEF1-220ENST00000600274 SLAMF9Q96A28 289 aa10.01□□□□□ -0.81
ARHGEF1-220ENST00000600274 MARVELD3Q96A59 401 aa10.01□□□□□ -0.81
ARHGEF1-220ENST00000600274 SH2D2AQ9NP31 389 aa10.01□□□□□ -0.81
ARHGEF1-220ENST00000600274 NIT2Q9NQR4 276 aa10.01□□□□□ -0.81
ARHGEF1-220ENST00000600274 ACACAQ13085 2346 aa10.01□□□□□ -0.81
ARHGEF1-220ENST00000600274 MEX3AA1L020 520 aaKnown RBP10.01□□□□□ -0.81
ARHGEF1-220ENST00000600274 LINC00587B1AMM8 73 aa10.01□□□□□ -0.81
ARHGEF1-220ENST00000600274 GP1BAP07359 652 aa10.01□□□□□ -0.81
ARHGEF1-220ENST00000600274 PRF1P14222 555 aa10.01□□□□□ -0.81
ARHGEF1-220ENST00000600274 HAAOP46952 286 aa10.01□□□□□ -0.81
ARHGEF1-220ENST00000600274 UBA52P62987 128 aaKnown RBP10.01□□□□□ -0.81
ARHGEF1-220ENST00000600274 RAB32Q13637 225 aa10.01□□□□□ -0.81
ARHGEF1-220ENST00000600274 HIKESHIQ53FT3 197 aa10.01□□□□□ -0.81
ARHGEF1-220ENST00000600274 CALHM1Q8IU99 346 aa10.01□□□□□ -0.81
ARHGEF1-220ENST00000600274 OR5AP2Q8NGF4 316 aa10.01□□□□□ -0.81
ARHGEF1-220ENST00000600274 CPT1CQ8TCG5 803 aa10.01□□□□□ -0.81
ARHGEF1-220ENST00000600274 TMEM230Q96A57 120 aa10.01□□□□□ -0.81
ARHGEF1-220ENST00000600274 OR10C1Q96KK4 312 aa10.01□□□□□ -0.81
ARHGEF1-220ENST00000600274 ZNF488Q96MN9 340 aa10.01□□□□□ -0.81
ARHGEF1-220ENST00000600274 FAM173AQ9BQD7 235 aa10.01□□□□□ -0.81
ARHGEF1-220ENST00000600274 PCNX1Q96RV3 2341 aa10.01□□□□□ -0.81
ARHGEF1-220ENST00000600274 NOVA1P51513 510 aaKnown RBP10.01□□□□□ -0.81
ARHGEF1-220ENST00000600274 CCL11P51671 97 aa10.01□□□□□ -0.81
ARHGEF1-220ENST00000600274 IAH1Q2TAA2 248 aaPredicted RBP10.01□□□□□ -0.81
ARHGEF1-220ENST00000600274 FAM76BQ5HYJ3 339 aa10.01□□□□□ -0.81
ARHGEF1-220ENST00000600274 PUSL1Q8N0Z8 303 aaKnown RBP10.01□□□□□ -0.81
ARHGEF1-220ENST00000600274 ZNF611Q8N823 705 aa10.01□□□□□ -0.81
ARHGEF1-220ENST00000600274 ZSCAN4Q8NAM6 433 aaPredicted RBP10.01□□□□□ -0.81
ARHGEF1-220ENST00000600274 OR5AC2Q9NZP5 309 aa10.01□□□□□ -0.81
ARHGEF1-220ENST00000600274 IL36RNQ9UBH0 155 aa10.01□□□□□ -0.81
ARHGEF1-220ENST00000600274 LIPGQ9Y5X9 500 aa10.01□□□□□ -0.81
ARHGEF1-220ENST00000600274 NCKAP5O14513 1909 aa10.01□□□□□ -0.81
ARHGEF1-220ENST00000600274 CCL1P22362 96 aa10□□□□□ -0.81
ARHGEF1-220ENST00000600274 MEOX1P50221 254 aa10□□□□□ -0.81
ARHGEF1-220ENST00000600274 TAS2R46P59540 309 aa10□□□□□ -0.81
ARHGEF1-220ENST00000600274 RAB1AP62820 205 aa10□□□□□ -0.81
ARHGEF1-220ENST00000600274 FOXO1Q12778 655 aa10□□□□□ -0.81
ARHGEF1-220ENST00000600274 MPPED2Q15777 294 aa10□□□□□ -0.81
ARHGEF1-220ENST00000600274 PAN3Q58A45 887 aaKnown RBP10□□□□□ -0.81
ARHGEF1-220ENST00000600274 SVBPQ8N300 66 aa10□□□□□ -0.81
ARHGEF1-220ENST00000600274 INTS12Q96CB8 462 aaKnown RBP10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms