RNA–Protein interactions for RNA: ENST00000599680.1

IRF3-224, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 472 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-224ENST00000599680 KLHL22Q53GT1 634 aa11.74□□□□□ -0.53
IRF3-224ENST00000599680 FDX2Q6P4F2 183 aa11.74□□□□□ -0.53
IRF3-224ENST00000599680 GDPGP1Q6ZNW5 385 aa11.74□□□□□ -0.53
IRF3-224ENST00000599680 LHFPL3Q86UP9 236 aa11.74□□□□□ -0.53
IRF3-224ENST00000599680 Q8IYB0 196 aa11.74□□□□□ -0.53
IRF3-224ENST00000599680 DNAAF1Q8NEP3 725 aa11.74□□□□□ -0.53
IRF3-224ENST00000599680 OR4M1Q8NGD0 313 aa11.74□□□□□ -0.53
IRF3-224ENST00000599680 ADAT3Q96EY9 351 aaPredicted RBP11.74□□□□□ -0.53
IRF3-224ENST00000599680 FAM234AQ9H0X4 552 aa11.74□□□□□ -0.53
IRF3-224ENST00000599680 HEXA-AS1Q9H8Q6 139 aa11.74□□□□□ -0.53
IRF3-224ENST00000599680 NEK6Q9HC98 313 aa11.74□□□□□ -0.53
IRF3-224ENST00000599680 AMBNQ9NP70 447 aa11.74□□□□□ -0.53
IRF3-224ENST00000599680 FAM118AQ9NWS6 357 aa11.74□□□□□ -0.53
IRF3-224ENST00000599680 ZNRD1Q9P1U0 126 aa11.74□□□□□ -0.53
IRF3-224ENST00000599680 SF3B6Q9Y3B4 125 aaKnown RBP11.74□□□□□ -0.53
IRF3-224ENST00000599680 E9PQ18 207 aa11.73□□□□□ -0.53
IRF3-224ENST00000599680 CHRM2P08172 466 aa11.73□□□□□ -0.53
IRF3-224ENST00000599680 RPSAP08865 295 aaKnown RBP11.73□□□□□ -0.53
IRF3-224ENST00000599680 PIPP12273 146 aaPredicted RBP11.73□□□□□ -0.53
IRF3-224ENST00000599680 GABRB1P18505 474 aa11.73□□□□□ -0.53
IRF3-224ENST00000599680 ATF1P18846 271 aa11.73□□□□□ -0.53
IRF3-224ENST00000599680 AZGP1P25311 298 aaKnown RBP11.73□□□□□ -0.53
IRF3-224ENST00000599680 EDDM3BP56851 147 aa11.73□□□□□ -0.53
IRF3-224ENST00000599680 NANOS3P60323 173 aaKnown RBP11.73□□□□□ -0.53
IRF3-224ENST00000599680 RAB40BQ12829 278 aa11.73□□□□□ -0.53
IRF3-224ENST00000599680 MRPL28Q13084 256 aaKnown RBP11.73□□□□□ -0.53
IRF3-224ENST00000599680 ALKBH1Q13686 389 aaKnown RBP11.73□□□□□ -0.53
IRF3-224ENST00000599680 C17orf107Q6ZR85 190 aa11.73□□□□□ -0.53
IRF3-224ENST00000599680 LHFPL2Q6ZUX7 228 aa11.73□□□□□ -0.53
IRF3-224ENST00000599680 UTS2BQ765I0 119 aa11.73□□□□□ -0.53
IRF3-224ENST00000599680 GDPD3Q7L5L3 318 aa11.73□□□□□ -0.53
IRF3-224ENST00000599680 SYS1Q8N2H4 156 aa11.73□□□□□ -0.53
IRF3-224ENST00000599680 PNKDQ8N490 385 aa11.73□□□□□ -0.53
IRF3-224ENST00000599680 RHOXF1Q8NHV9 184 aa11.73□□□□□ -0.53
IRF3-224ENST00000599680 TNFRSF14Q92956 283 aa11.73□□□□□ -0.53
IRF3-224ENST00000599680 PELI1Q96FA3 418 aa11.73□□□□□ -0.53
IRF3-224ENST00000599680 COMMD4Q9H0A8 199 aa11.73□□□□□ -0.53
IRF3-224ENST00000599680 INPP5EQ9NRR6 644 aa11.73□□□□□ -0.53
IRF3-224ENST00000599680 SMPD3Q9NY59 655 aaPredicted RBP11.73□□□□□ -0.53
IRF3-224ENST00000599680 MTCH1Q9NZJ7 389 aa11.73□□□□□ -0.53
IRF3-224ENST00000599680 GLS2Q9UI32 602 aa11.73□□□□□ -0.53
IRF3-224ENST00000599680 RPL36Q9Y3U8 105 aaKnown RBP11.73□□□□□ -0.53
IRF3-224ENST00000599680 PKD1L1Q8TDX9 2849 aa11.73□□□□□ -0.53
IRF3-224ENST00000599680 K7N7A8 449 aa11.72□□□□□ -0.53
IRF3-224ENST00000599680 NDUFA7O95182 113 aa11.72□□□□□ -0.53
IRF3-224ENST00000599680 GBX2P52951 348 aaPredicted RBP11.72□□□□□ -0.53
IRF3-224ENST00000599680 ERVFRD-1P60508 538 aa11.72□□□□□ -0.53
IRF3-224ENST00000599680 MIDNQ504T8 468 aa11.72□□□□□ -0.53
IRF3-224ENST00000599680 TMEM200BQ69YZ2 307 aa11.72□□□□□ -0.53
IRF3-224ENST00000599680 ZSCAN4Q8NAM6 433 aaPredicted RBP11.72□□□□□ -0.53
IRF3-224ENST00000599680 OR13C9Q8NGT0 318 aa11.72□□□□□ -0.53
IRF3-224ENST00000599680 TSEN15Q8WW01 171 aaKnown RBP11.72□□□□□ -0.53
IRF3-224ENST00000599680 RNF166Q96A37 237 aaPredicted RBP11.72□□□□□ -0.53
IRF3-224ENST00000599680 SPSB1Q96BD6 273 aa11.72□□□□□ -0.53
IRF3-224ENST00000599680 RDH12Q96NR8 316 aa11.72□□□□□ -0.53
IRF3-224ENST00000599680 OPALINQ96PE5 141 aa11.72□□□□□ -0.53
IRF3-224ENST00000599680 ERVK13-1Q9NX77 482 aa11.72□□□□□ -0.53
IRF3-224ENST00000599680 C1RLQ9NZP8 487 aa11.72□□□□□ -0.53
IRF3-224ENST00000599680 MYRFQ9Y2G1 1151 aa11.72□□□□□ -0.53
IRF3-224ENST00000599680 PCDHGB5Q9Y5G0 923 aa11.72□□□□□ -0.53
IRF3-224ENST00000599680 MMP24Q9Y5R2 645 aa11.72□□□□□ -0.53
IRF3-224ENST00000599680 OR4C45A6NMZ5 311 aa11.71□□□□□ -0.53
IRF3-224ENST00000599680 F8VVB4 439 aa11.71□□□□□ -0.53
IRF3-224ENST00000599680 F8VWA3 439 aa11.71□□□□□ -0.53
IRF3-224ENST00000599680 SPRY1O43609 319 aaPredicted RBP11.71□□□□□ -0.53
IRF3-224ENST00000599680 IGHA1P01876 353 aa11.71□□□□□ -0.53
IRF3-224ENST00000599680 CCDC159P0C7I6 412 aa11.71□□□□□ -0.53
IRF3-224ENST00000599680 CCL3L1P16619 93 aa11.71□□□□□ -0.53
IRF3-224ENST00000599680 PRKACAP17612 351 aa11.71□□□□□ -0.53
IRF3-224ENST00000599680 GABRR1P24046 479 aa11.71□□□□□ -0.53
IRF3-224ENST00000599680 SNU13P55769 128 aaKnown RBP11.71□□□□□ -0.53
IRF3-224ENST00000599680 LGALS4P56470 323 aa11.71□□□□□ -0.53
IRF3-224ENST00000599680 OLFML2AQ68BL7 652 aa11.71□□□□□ -0.53
IRF3-224ENST00000599680 DHRS7BQ6IAN0 325 aaPredicted RBP11.71□□□□□ -0.53
IRF3-224ENST00000599680 FAM58AQ8N1B3 248 aa11.71□□□□□ -0.53
IRF3-224ENST00000599680 OR51A4Q8NGJ6 313 aa11.71□□□□□ -0.53
IRF3-224ENST00000599680 OR52I1Q8NGK6 324 aa11.71□□□□□ -0.53
IRF3-224ENST00000599680 OR10AC1Q8NH08 325 aa11.71□□□□□ -0.53
IRF3-224ENST00000599680 OR5R1Q8NH85 324 aa11.71□□□□□ -0.53
IRF3-224ENST00000599680 OR5AK2Q8NH90 309 aa11.71□□□□□ -0.53
IRF3-224ENST00000599680 HAVCR2Q8TDQ0 301 aa11.71□□□□□ -0.53
IRF3-224ENST00000599680 CYGBQ8WWM9 190 aa11.71□□□□□ -0.53
IRF3-224ENST00000599680 RFT1Q96AA3 541 aa11.71□□□□□ -0.53
IRF3-224ENST00000599680 SLITRK2Q9H156 845 aa11.71□□□□□ -0.53
IRF3-224ENST00000599680 ISG20L2Q9H9L3 353 aaKnown RBP11.71□□□□□ -0.53
IRF3-224ENST00000599680 VPREB3Q9UKI3 123 aa11.71□□□□□ -0.53
IRF3-224ENST00000599680 IGKV1-9A0A0C4DH69 117 aa11.7□□□□□ -0.54
IRF3-224ENST00000599680 TRBV2A0A0J9YWF9 115 aa11.7□□□□□ -0.54
IRF3-224ENST00000599680 TMEM212A6NML5 194 aa11.7□□□□□ -0.54
IRF3-224ENST00000599680 HAND1O96004 215 aa11.7□□□□□ -0.54
IRF3-224ENST00000599680 HCKP08631 526 aa11.7□□□□□ -0.54
IRF3-224ENST00000599680 BCL3P20749 454 aa11.7□□□□□ -0.54
IRF3-224ENST00000599680 COX7A1P24310 79 aa11.7□□□□□ -0.54
IRF3-224ENST00000599680 PEX2P28328 305 aa11.7□□□□□ -0.54
IRF3-224ENST00000599680 EDDM3AQ14507 147 aa11.7□□□□□ -0.54
IRF3-224ENST00000599680 ZNF273Q14593 569 aa11.7□□□□□ -0.54
IRF3-224ENST00000599680 LRRC36Q1X8D7 754 aa11.7□□□□□ -0.54
IRF3-224ENST00000599680 ZNF782Q6ZMW2 699 aaPredicted RBP11.7□□□□□ -0.54
IRF3-224ENST00000599680 OR8H2Q8N162 312 aa11.7□□□□□ -0.54
IRF3-224ENST00000599680 OR5D14Q8NGL3 314 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms