RNA–Protein interactions for RNA: ENST00000599223.5

IRF3-223, Transcript of interferon regulatory factor 3, human

TSL 1 (best) BASIC

Gene IRF3, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
IRF3-223	ENST00000599223		A0A0U1RQV5	110 aa		11.9	□□□□□ -0.5
IRF3-223	ENST00000599223	DPPA5	A6NC42	116 aa		11.9	□□□□□ -0.5
IRF3-223	ENST00000599223		A6NHS1	94 aa		11.9	□□□□□ -0.5
IRF3-223	ENST00000599223	OR5B21	A6NL26	309 aa		11.9	□□□□□ -0.5
IRF3-223	ENST00000599223	TRIM64C	A6NLI5	447 aa		11.9	□□□□□ -0.5
IRF3-223	ENST00000599223	RFPL4A	A6NLU0	287 aa		11.9	□□□□□ -0.5
IRF3-223	ENST00000599223	RFPL4AL1	F8VTS6	287 aa		11.9	□□□□□ -0.5
IRF3-223	ENST00000599223	PRKY	O43930	277 aa		11.9	□□□□□ -0.5
IRF3-223	ENST00000599223	NOL3	O60936	208 aa	Known RBP	11.9	□□□□□ -0.5
IRF3-223	ENST00000599223	ENTPD6	O75354	484 aa		11.9	□□□□□ -0.5
IRF3-223	ENST00000599223	OPN1MW	P04001	364 aa		11.9	□□□□□ -0.5
IRF3-223	ENST00000599223	OPN1MW2	P0DN77	364 aa		11.9	□□□□□ -0.5
IRF3-223	ENST00000599223	OPN1MW3	P0DN78	364 aa		11.9	□□□□□ -0.5
IRF3-223	ENST00000599223	GABRB1	P18505	474 aa		11.9	□□□□□ -0.5
IRF3-223	ENST00000599223	MAP2K3	P46734	347 aa		11.9	□□□□□ -0.5
IRF3-223	ENST00000599223	RPS7	P62081	194 aa	Known RBP	11.9	□□□□□ -0.5
IRF3-223	ENST00000599223	SLC35A2	P78381	396 aa		11.9	□□□□□ -0.5
IRF3-223	ENST00000599223	HABP2	Q14520	560 aa	Predicted RBP	11.9	□□□□□ -0.5
IRF3-223	ENST00000599223	ZNF273	Q14593	569 aa		11.9	□□□□□ -0.5
IRF3-223	ENST00000599223	KLHL22	Q53GT1	634 aa		11.9	□□□□□ -0.5
IRF3-223	ENST00000599223	PLCXD3	Q63HM9	321 aa		11.9	□□□□□ -0.5
IRF3-223	ENST00000599223	ACP7	Q6ZNF0	438 aa		11.9	□□□□□ -0.5
IRF3-223	ENST00000599223		Q6ZTK2	550 aa		11.9	□□□□□ -0.5
IRF3-223	ENST00000599223	PRSS48	Q7RTY5	328 aa		11.9	□□□□□ -0.5
IRF3-223	ENST00000599223	KRT77	Q7Z794	578 aa		11.9	□□□□□ -0.5
IRF3-223	ENST00000599223	COMMD2	Q86X83	199 aa		11.9	□□□□□ -0.5
IRF3-223	ENST00000599223	LYG1	Q8N1E2	194 aa		11.9	□□□□□ -0.5
IRF3-223	ENST00000599223	DYNAP	Q8N1N2	210 aa		11.9	□□□□□ -0.5
IRF3-223	ENST00000599223	POC1A	Q8NBT0	407 aa		11.9	□□□□□ -0.5
IRF3-223	ENST00000599223	OR5D13	Q8NGL4	314 aa		11.9	□□□□□ -0.5
IRF3-223	ENST00000599223	OR51E1	Q8TCB6	317 aa		11.9	□□□□□ -0.5
IRF3-223	ENST00000599223	TEAD3	Q99594	435 aa		11.9	□□□□□ -0.5
IRF3-223	ENST00000599223	PBOV1	Q9GZY1	135 aa		11.9	□□□□□ -0.5
IRF3-223	ENST00000599223	PSORS1C1	Q9UIG5	152 aa		11.9	□□□□□ -0.5
IRF3-223	ENST00000599223	LAMP5	Q9UJQ1	280 aa		11.9	□□□□□ -0.5
IRF3-223	ENST00000599223	TMEM269	A0A1B0GVZ9	245 aa		11.89	□□□□□ -0.51
IRF3-223	ENST00000599223	CCDC160	A6NGH7	325 aa		11.89	□□□□□ -0.51
IRF3-223	ENST00000599223		M0R129	80 aa		11.89	□□□□□ -0.51
IRF3-223	ENST00000599223	SRSF10	O75494	262 aa	Known RBP	11.89	□□□□□ -0.51
IRF3-223	ENST00000599223	TFAP2A	P05549	437 aa		11.89	□□□□□ -0.51
IRF3-223	ENST00000599223	PIP	P12273	146 aa	Predicted RBP	11.89	□□□□□ -0.51
IRF3-223	ENST00000599223	KIR2DS4	P43632	304 aa		11.89	□□□□□ -0.51
IRF3-223	ENST00000599223	CAPZA1	P52907	286 aa		11.89	□□□□□ -0.51
IRF3-223	ENST00000599223	RPL31	P62899	125 aa	Known RBP	11.89	□□□□□ -0.51
IRF3-223	ENST00000599223	NEDD8	Q15843	81 aa		11.89	□□□□□ -0.51
IRF3-223	ENST00000599223	SMN1	Q16637	294 aa	Known RBP	11.89	□□□□□ -0.51
IRF3-223	ENST00000599223	SLC35D3	Q5M8T2	416 aa		11.89	□□□□□ -0.51
IRF3-223	ENST00000599223	LDLRAD2	Q5SZI1	272 aa		11.89	□□□□□ -0.51
IRF3-223	ENST00000599223	TMEM200B	Q69YZ2	307 aa		11.89	□□□□□ -0.51
IRF3-223	ENST00000599223	LAIR2	Q6ISS4	152 aa		11.89	□□□□□ -0.51
IRF3-223	ENST00000599223	ZNF782	Q6ZMW2	699 aa	Predicted RBP	11.89	□□□□□ -0.51
IRF3-223	ENST00000599223	MOB3C	Q70IA8	216 aa		11.89	□□□□□ -0.51
IRF3-223	ENST00000599223	LHFPL4	Q7Z7J7	247 aa		11.89	□□□□□ -0.51
IRF3-223	ENST00000599223	SPART	Q8N0X7	666 aa		11.89	□□□□□ -0.51
IRF3-223	ENST00000599223	OR4M1	Q8NGD0	313 aa		11.89	□□□□□ -0.51
IRF3-223	ENST00000599223	FCGR1B	Q92637	280 aa		11.89	□□□□□ -0.51
IRF3-223	ENST00000599223	HIST1H2AA	Q96QV6	131 aa		11.89	□□□□□ -0.51
IRF3-223	ENST00000599223	MEGF9	Q9H1U4	602 aa		11.89	□□□□□ -0.51
IRF3-223	ENST00000599223	RANBP3	Q9H6Z4	567 aa	Predicted RBP	11.89	□□□□□ -0.51
IRF3-223	ENST00000599223	ZNF702P	Q9H963	129 aa		11.89	□□□□□ -0.51
IRF3-223	ENST00000599223	CHCHD3	Q9NX63	227 aa	Known RBP	11.89	□□□□□ -0.51
IRF3-223	ENST00000599223	AASS	Q9UDR5	926 aa		11.89	□□□□□ -0.51
IRF3-223	ENST00000599223	PIGL	Q9Y2B2	252 aa		11.89	□□□□□ -0.51
IRF3-223	ENST00000599223	MEX3A	A1L020	520 aa	Known RBP	11.88	□□□□□ -0.51
IRF3-223	ENST00000599223	TTR	P02766	147 aa		11.88	□□□□□ -0.51
IRF3-223	ENST00000599223	CDK1	P06493	297 aa		11.88	□□□□□ -0.51
IRF3-223	ENST00000599223	PGA5	P0DJD9	388 aa		11.88	□□□□□ -0.51
IRF3-223	ENST00000599223	ATP6V1E1	P36543	226 aa		11.88	□□□□□ -0.51
IRF3-223	ENST00000599223	DLX6	P56179	175 aa		11.88	□□□□□ -0.51
IRF3-223	ENST00000599223	ROM1	Q03395	351 aa		11.88	□□□□□ -0.51
IRF3-223	ENST00000599223	TMED1	Q13445	227 aa		11.88	□□□□□ -0.51
IRF3-223	ENST00000599223	SMIM21	Q3B7S5	101 aa		11.88	□□□□□ -0.51
IRF3-223	ENST00000599223	PLA1A	Q53H76	456 aa		11.88	□□□□□ -0.51
IRF3-223	ENST00000599223	NXNL2	Q5VZ03	156 aa		11.88	□□□□□ -0.51
IRF3-223	ENST00000599223		Q6ZPA2	131 aa		11.88	□□□□□ -0.51
IRF3-223	ENST00000599223	PLEKHG7	Q6ZR37	379 aa		11.88	□□□□□ -0.51
IRF3-223	ENST00000599223	SATL1	Q86VE3	508 aa		11.88	□□□□□ -0.51
IRF3-223	ENST00000599223	OR5A2	Q8NGI9	324 aa		11.88	□□□□□ -0.51
IRF3-223	ENST00000599223	GGH	Q92820	318 aa		11.88	□□□□□ -0.51
IRF3-223	ENST00000599223	OR8B4	Q96RC9	309 aa		11.88	□□□□□ -0.51
IRF3-223	ENST00000599223	NRIP2	Q9BQI9	281 aa		11.88	□□□□□ -0.51
IRF3-223	ENST00000599223	YIPF3	Q9GZM5	350 aa		11.88	□□□□□ -0.51
IRF3-223	ENST00000599223	AMBN	Q9NP70	447 aa		11.88	□□□□□ -0.51
IRF3-223	ENST00000599223	NUFIP1	Q9UHK0	495 aa	Known RBP	11.88	□□□□□ -0.51
IRF3-223	ENST00000599223		J3QT63	122 aa		11.87	□□□□□ -0.51
IRF3-223	ENST00000599223	MAGEB4	O15481	346 aa	Predicted RBP	11.87	□□□□□ -0.51
IRF3-223	ENST00000599223	VSIG10L2	P0DP72	767 aa		11.87	□□□□□ -0.51
IRF3-223	ENST00000599223	DBT	P11182	482 aa	Known RBP	11.87	□□□□□ -0.51
IRF3-223	ENST00000599223	JUNB	P17275	347 aa	Predicted RBP	11.87	□□□□□ -0.51
IRF3-223	ENST00000599223	MYL12A	P19105	171 aa		11.87	□□□□□ -0.51
IRF3-223	ENST00000599223	HAAO	P46952	286 aa		11.87	□□□□□ -0.51
IRF3-223	ENST00000599223	ALDH3B2	P48448	385 aa		11.87	□□□□□ -0.51
IRF3-223	ENST00000599223	ZNF91	Q05481	1191 aa		11.87	□□□□□ -0.51
IRF3-223	ENST00000599223	RIPPLY1	Q0D2K3	151 aa		11.87	□□□□□ -0.51
IRF3-223	ENST00000599223	ST3GAL4	Q11206	333 aa		11.87	□□□□□ -0.51
IRF3-223	ENST00000599223	AANAT	Q16613	207 aa		11.87	□□□□□ -0.51
IRF3-223	ENST00000599223	TMEM42	Q69YG0	159 aa		11.87	□□□□□ -0.51
IRF3-223	ENST00000599223	CCBE1	Q6UXH8	406 aa	Predicted RBP	11.87	□□□□□ -0.51
IRF3-223	ENST00000599223	TCF23	Q7RTU1	214 aa		11.87	□□□□□ -0.51
IRF3-223	ENST00000599223	BCDIN3D	Q7Z5W3	292 aa	Known RBP	11.87	□□□□□ -0.51

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