RNA–Protein interactions for RNA: ENST00000598570.5

USHBP1-209, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 3

Gene USHBP1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-209ENST00000598570 DHDHQ9UQ10 334 aa14.55□□□□□ -0.08
USHBP1-209ENST00000598570 TRBV5-7A0A0A0MS05 114 aa14.54□□□□□ -0.08
USHBP1-209ENST00000598570 IGKV1-12A0A0C4DH73 117 aa14.54□□□□□ -0.08
USHBP1-209ENST00000598570 NKX6-3A6NJ46 265 aa14.54□□□□□ -0.08
USHBP1-209ENST00000598570 H0YHG0 523 aa14.54□□□□□ -0.08
USHBP1-209ENST00000598570 SULT1B1O43704 296 aa14.54□□□□□ -0.08
USHBP1-209ENST00000598570 ZNF737O75373 536 aa14.54□□□□□ -0.08
USHBP1-209ENST00000598570 KDM4BO94953 1096 aa14.54□□□□□ -0.08
USHBP1-209ENST00000598570 NXPH2O95156 264 aa14.54□□□□□ -0.08
USHBP1-209ENST00000598570 IGKV1D-12P01611 117 aa14.54□□□□□ -0.08
USHBP1-209ENST00000598570 SELLP14151 372 aa14.54□□□□□ -0.08
USHBP1-209ENST00000598570 IGFBP3P17936 291 aaPredicted RBP14.54□□□□□ -0.08
USHBP1-209ENST00000598570 FGF12P61328 243 aa14.54□□□□□ -0.08
USHBP1-209ENST00000598570 YIF1BQ5BJH7 314 aa14.54□□□□□ -0.08
USHBP1-209ENST00000598570 METAP1DQ6UB28 335 aaPredicted RBP14.54□□□□□ -0.08
USHBP1-209ENST00000598570 IZUMO2Q6UXV1 221 aa14.54□□□□□ -0.08
USHBP1-209ENST00000598570 STX19Q8N4C7 294 aa14.54□□□□□ -0.08
USHBP1-209ENST00000598570 ZNRF1Q8ND25 227 aa14.54□□□□□ -0.08
USHBP1-209ENST00000598570 ZFAND2BQ8WV99 257 aa14.54□□□□□ -0.08
USHBP1-209ENST00000598570 MYDGFQ969H8 173 aa14.54□□□□□ -0.08
USHBP1-209ENST00000598570 WDFY2Q96P53 400 aa14.54□□□□□ -0.08
USHBP1-209ENST00000598570 SLC25A10Q9UBX3 287 aaPredicted RBP14.54□□□□□ -0.08
USHBP1-209ENST00000598570 DSCAML1Q8TD84 2053 aa14.54□□□□□ -0.08
USHBP1-209ENST00000598570 TRBV23-1A0A0A0MS06 115 aa14.53□□□□□ -0.08
USHBP1-209ENST00000598570 K7N7A8 449 aa14.53□□□□□ -0.08
USHBP1-209ENST00000598570 TFF1P04155 84 aa14.53□□□□□ -0.08
USHBP1-209ENST00000598570 CRHBPP24387 322 aa14.53□□□□□ -0.08
USHBP1-209ENST00000598570 LMO1P25800 156 aa14.53□□□□□ -0.08
USHBP1-209ENST00000598570 HILS1P60008 231 aa14.53□□□□□ -0.08
USHBP1-209ENST00000598570 GPR50Q13585 617 aa14.53□□□□□ -0.08
USHBP1-209ENST00000598570 KISS1Q15726 138 aa14.53□□□□□ -0.08
USHBP1-209ENST00000598570 ELP2Q6IA86 826 aa14.53□□□□□ -0.08
USHBP1-209ENST00000598570 Q8N7P7 452 aa14.53□□□□□ -0.08
USHBP1-209ENST00000598570 OR13C9Q8NGT0 318 aa14.53□□□□□ -0.08
USHBP1-209ENST00000598570 NPRL2Q8WTW4 380 aa14.53□□□□□ -0.08
USHBP1-209ENST00000598570 NEK6Q9HC98 313 aa14.53□□□□□ -0.08
USHBP1-209ENST00000598570 ZNF69Q9UC07 566 aa14.53□□□□□ -0.08
USHBP1-209ENST00000598570 TCF21O43680 179 aa14.52□□□□□ -0.09
USHBP1-209ENST00000598570 VHLP40337 213 aa14.52□□□□□ -0.09
USHBP1-209ENST00000598570 NPBWR2P48146 333 aa14.52□□□□□ -0.09
USHBP1-209ENST00000598570 PDCD1Q15116 288 aa14.52□□□□□ -0.09
USHBP1-209ENST00000598570 UNQ9370/PRO34162Q6UXP9 181 aa14.52□□□□□ -0.09
USHBP1-209ENST00000598570 LYPD6Q86Y78 171 aa14.52□□□□□ -0.09
USHBP1-209ENST00000598570 C11orf42Q8N5U0 333 aa14.52□□□□□ -0.09
USHBP1-209ENST00000598570 PXT1Q8NFP0 134 aa14.52□□□□□ -0.09
USHBP1-209ENST00000598570 ST8SIA4Q92187 359 aa14.52□□□□□ -0.09
USHBP1-209ENST00000598570 SGCDQ92629 289 aa14.52□□□□□ -0.09
USHBP1-209ENST00000598570 TNFRSF14Q92956 283 aa14.52□□□□□ -0.09
USHBP1-209ENST00000598570 TMEM106AQ96A25 262 aa14.52□□□□□ -0.09
USHBP1-209ENST00000598570 HMG20AQ9NP66 347 aa14.52□□□□□ -0.09
USHBP1-209ENST00000598570 SCN3BQ9NY72 215 aa14.52□□□□□ -0.09
USHBP1-209ENST00000598570 ERGIC3Q9Y282 383 aa14.52□□□□□ -0.09
USHBP1-209ENST00000598570 TPRKBQ9Y3C4 175 aa14.52□□□□□ -0.09
USHBP1-209ENST00000598570 PTGES3LE9PB15 166 aa14.51□□□□□ -0.09
USHBP1-209ENST00000598570 M0R1W7 72 aa14.51□□□□□ -0.09
USHBP1-209ENST00000598570 DENRO43583 198 aaKnown RBP14.51□□□□□ -0.09
USHBP1-209ENST00000598570 TK1P04183 234 aa14.51□□□□□ -0.09
USHBP1-209ENST00000598570 CD2P06729 351 aa14.51□□□□□ -0.09
USHBP1-209ENST00000598570 CHRM2P08172 466 aa14.51□□□□□ -0.09
USHBP1-209ENST00000598570 IGHV4-38-2P0DP08 117 aa14.51□□□□□ -0.09
USHBP1-209ENST00000598570 CD37P11049 281 aa14.51□□□□□ -0.09
USHBP1-209ENST00000598570 FSTP19883 344 aa14.51□□□□□ -0.09
USHBP1-209ENST00000598570 FPR2P25090 351 aa14.51□□□□□ -0.09
USHBP1-209ENST00000598570 GMFBP60983 142 aa14.51□□□□□ -0.09
USHBP1-209ENST00000598570 IKZF1Q13422 519 aa14.51□□□□□ -0.09
USHBP1-209ENST00000598570 Q499Y3 187 aa14.51□□□□□ -0.09
USHBP1-209ENST00000598570 ARMCX4Q5H9R4 360 aa14.51□□□□□ -0.09
USHBP1-209ENST00000598570 SPIN3Q5JUX0 258 aa14.51□□□□□ -0.09
USHBP1-209ENST00000598570 CDH26Q8IXH8 852 aa14.51□□□□□ -0.09
USHBP1-209ENST00000598570 FAM58AQ8N1B3 248 aa14.51□□□□□ -0.09
USHBP1-209ENST00000598570 SLAMF9Q96A28 289 aa14.51□□□□□ -0.09
USHBP1-209ENST00000598570 MND1Q9BWT6 205 aa14.51□□□□□ -0.09
USHBP1-209ENST00000598570 ISYNA1Q9NPH2 558 aa14.51□□□□□ -0.09
USHBP1-209ENST00000598570 CENPVL3A0A0U1RRI6 287 aa14.5□□□□□ -0.09
USHBP1-209ENST00000598570 SC5DO75845 299 aa14.5□□□□□ -0.09
USHBP1-209ENST00000598570 TOX4O94842 621 aa14.5□□□□□ -0.09
USHBP1-209ENST00000598570 VENTXO95231 258 aa14.5□□□□□ -0.09
USHBP1-209ENST00000598570 SFTPBP07988 381 aa14.5□□□□□ -0.09
USHBP1-209ENST00000598570 OCM2P0CE71 109 aa14.5□□□□□ -0.09
USHBP1-209ENST00000598570 RAB3AP20336 220 aa14.5□□□□□ -0.09
USHBP1-209ENST00000598570 GABRA2P47869 451 aa14.5□□□□□ -0.09
USHBP1-209ENST00000598570 SPHARQ15513 63 aa14.5□□□□□ -0.09
USHBP1-209ENST00000598570 C17orf107Q6ZR85 190 aa14.5□□□□□ -0.09
USHBP1-209ENST00000598570 OR51A2Q8NGJ7 313 aa14.5□□□□□ -0.09
USHBP1-209ENST00000598570 TBC1D15Q8TC07 691 aa14.5□□□□□ -0.09
USHBP1-209ENST00000598570 TMEM158Q8WZ71 300 aa14.5□□□□□ -0.09
USHBP1-209ENST00000598570 SUCNR1Q9BXA5 334 aa14.5□□□□□ -0.09
USHBP1-209ENST00000598570 TMEM138Q9NPI0 162 aa14.5□□□□□ -0.09
USHBP1-209ENST00000598570 RBFOX1Q9NWB1 397 aaKnown RBP14.5□□□□□ -0.09
USHBP1-209ENST00000598570 DNHD1Q96M86 4753 aa14.49□□□□□ -0.09
USHBP1-209ENST00000598570 TENM1Q9UKZ4 2725 aa14.49□□□□□ -0.09
USHBP1-209ENST00000598570 CLDN34H7C241 214 aa14.49□□□□□ -0.09
USHBP1-209ENST00000598570 PIN1P1O15428 100 aa14.49□□□□□ -0.09
USHBP1-209ENST00000598570 BCL3P20749 454 aa14.49□□□□□ -0.09
USHBP1-209ENST00000598570 ARF6P62330 175 aa14.49□□□□□ -0.09
USHBP1-209ENST00000598570 TPBGQ13641 420 aa14.49□□□□□ -0.09
USHBP1-209ENST00000598570 KRTAP24-1Q3LI83 254 aa14.49□□□□□ -0.09
USHBP1-209ENST00000598570 RBM48Q5RL73 367 aaKnown RBP14.49□□□□□ -0.09
USHBP1-209ENST00000598570 METTL11BQ5VVY1 283 aa14.49□□□□□ -0.09
USHBP1-209ENST00000598570 PRSS48Q7RTY5 328 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms