RNA–Protein interactions for RNA: ENST00000597995.1

TRIM28-212, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-212ENST00000597995 MBOAT4Q96T53 435 aa10.13□□□□□ -0.79
TRIM28-212ENST00000597995 ZNF702PQ9H963 129 aa10.13□□□□□ -0.79
TRIM28-212ENST00000597995 C19orf12Q9NSK7 152 aa10.13□□□□□ -0.79
TRIM28-212ENST00000597995 FAM90A8PA6NJQ4 464 aa10.12□□□□□ -0.79
TRIM28-212ENST00000597995 RFPL4AA6NLU0 287 aa10.12□□□□□ -0.79
TRIM28-212ENST00000597995 DHRS7CA6NNS2 312 aa10.12□□□□□ -0.79
TRIM28-212ENST00000597995 RFPL4AL1F8VTS6 287 aa10.12□□□□□ -0.79
TRIM28-212ENST00000597995 NOS1APO75052 506 aaPredicted RBP10.12□□□□□ -0.79
TRIM28-212ENST00000597995 SULT1C4O75897 302 aa10.12□□□□□ -0.79
TRIM28-212ENST00000597995 PGA5P0DJD9 388 aa10.12□□□□□ -0.79
TRIM28-212ENST00000597995 GABRB1P18505 474 aa10.12□□□□□ -0.79
TRIM28-212ENST00000597995 KIR3DL2P43630 455 aa10.12□□□□□ -0.79
TRIM28-212ENST00000597995 HAAOP46952 286 aa10.12□□□□□ -0.79
TRIM28-212ENST00000597995 ALDH3A2P51648 485 aa10.12□□□□□ -0.79
TRIM28-212ENST00000597995 BMXP51813 675 aa10.12□□□□□ -0.79
TRIM28-212ENST00000597995 CAPZA1P52907 286 aa10.12□□□□□ -0.79
TRIM28-212ENST00000597995 ERVFRD-1P60508 538 aa10.12□□□□□ -0.79
TRIM28-212ENST00000597995 CDC42P60953 191 aa10.12□□□□□ -0.79
TRIM28-212ENST00000597995 RPL31P62899 125 aaKnown RBP10.12□□□□□ -0.79
TRIM28-212ENST00000597995 UBE2V2Q15819 145 aa10.12□□□□□ -0.79
TRIM28-212ENST00000597995 TP53I3Q53FA7 332 aa10.12□□□□□ -0.79
TRIM28-212ENST00000597995 SLC25A30Q5SVS4 291 aa10.12□□□□□ -0.79
TRIM28-212ENST00000597995 TMEM200BQ69YZ2 307 aa10.12□□□□□ -0.79
TRIM28-212ENST00000597995 ZFP1Q6P2D0 407 aa10.12□□□□□ -0.79
TRIM28-212ENST00000597995 ACP7Q6ZNF0 438 aa10.12□□□□□ -0.79
TRIM28-212ENST00000597995 CALHM1Q8IU99 346 aa10.12□□□□□ -0.79
TRIM28-212ENST00000597995 RDH10Q8IZV5 341 aa10.12□□□□□ -0.79
TRIM28-212ENST00000597995 CBR4Q8N4T8 237 aa10.12□□□□□ -0.79
TRIM28-212ENST00000597995 ZNF561Q8N587 486 aa10.12□□□□□ -0.79
TRIM28-212ENST00000597995 CD177Q8N6Q3 437 aa10.12□□□□□ -0.79
TRIM28-212ENST00000597995 POC1AQ8NBT0 407 aa10.12□□□□□ -0.79
TRIM28-212ENST00000597995 WIPF2Q8TF74 440 aaPredicted RBP10.12□□□□□ -0.79
TRIM28-212ENST00000597995 TRUB1Q8WWH5 349 aaKnown RBP10.12□□□□□ -0.79
TRIM28-212ENST00000597995 SGCDQ92629 289 aa10.12□□□□□ -0.79
TRIM28-212ENST00000597995 NKX3-1Q99801 234 aaPredicted RBP10.12□□□□□ -0.79
TRIM28-212ENST00000597995 SLC29A1Q99808 456 aa10.12□□□□□ -0.79
TRIM28-212ENST00000597995 MMP28Q9H239 520 aa10.12□□□□□ -0.79
TRIM28-212ENST00000597995 IGKV1-27A0A075B6S5 117 aa10.11□□□□□ -0.79
TRIM28-212ENST00000597995 J3QT63 122 aa10.11□□□□□ -0.79
TRIM28-212ENST00000597995 SLC1A7O00341 560 aa10.11□□□□□ -0.79
TRIM28-212ENST00000597995 CD28P10747 220 aa10.11□□□□□ -0.79
TRIM28-212ENST00000597995 MPZP25189 248 aa10.11□□□□□ -0.79
TRIM28-212ENST00000597995 PAX6P26367 422 aa10.11□□□□□ -0.79
TRIM28-212ENST00000597995 PRDX2P32119 198 aa10.11□□□□□ -0.79
TRIM28-212ENST00000597995 CEBPDP49716 269 aaPredicted RBP10.11□□□□□ -0.79
TRIM28-212ENST00000597995 ERVK11-1P61568 191 aa10.11□□□□□ -0.79
TRIM28-212ENST00000597995 SNRPGP62308 76 aaKnown RBP10.11□□□□□ -0.79
TRIM28-212ENST00000597995 SMIM21Q3B7S5 101 aa10.11□□□□□ -0.79
TRIM28-212ENST00000597995 NSUN5P1Q3KNT7 163 aa10.11□□□□□ -0.79
TRIM28-212ENST00000597995 ANGPTL5Q86XS5 388 aa10.11□□□□□ -0.79
TRIM28-212ENST00000597995 LYG1Q8N1E2 194 aa10.11□□□□□ -0.79
TRIM28-212ENST00000597995 BATF2Q8N1L9 274 aa10.11□□□□□ -0.79
TRIM28-212ENST00000597995 R3HDM4Q96D70 268 aa10.11□□□□□ -0.79
TRIM28-212ENST00000597995 MALSU1Q96EH3 234 aa10.11□□□□□ -0.79
TRIM28-212ENST00000597995 NRIP2Q9BQI9 281 aa10.11□□□□□ -0.79
TRIM28-212ENST00000597995 WNT10AQ9GZT5 417 aa10.11□□□□□ -0.79
TRIM28-212ENST00000597995 HES4Q9HCC6 221 aa10.11□□□□□ -0.79
TRIM28-212ENST00000597995 AURKAIP1Q9NWT8 199 aaPredicted RBP10.11□□□□□ -0.79
TRIM28-212ENST00000597995 PITPNC1Q9UKF7 332 aa10.11□□□□□ -0.79
TRIM28-212ENST00000597995 TCF19Q9Y242 345 aa10.11□□□□□ -0.79
TRIM28-212ENST00000597995 A6NDX4 124 aa10.1□□□□□ -0.79
TRIM28-212ENST00000597995 ADARB2-AS1A8MUL3 147 aa10.1□□□□□ -0.79
TRIM28-212ENST00000597995 F8VVB4 439 aa10.1□□□□□ -0.79
TRIM28-212ENST00000597995 F8VWA3 439 aa10.1□□□□□ -0.79
TRIM28-212ENST00000597995 ATP6V1E1P36543 226 aa10.1□□□□□ -0.79
TRIM28-212ENST00000597995 NANOS3P60323 173 aaKnown RBP10.1□□□□□ -0.79
TRIM28-212ENST00000597995 CNN3Q15417 329 aaKnown RBP10.1□□□□□ -0.79
TRIM28-212ENST00000597995 ZNF573Q86YE8 665 aa10.1□□□□□ -0.79
TRIM28-212ENST00000597995 WFDC9Q8NEX5 89 aa10.1□□□□□ -0.79
TRIM28-212ENST00000597995 RPS4Y2Q8TD47 263 aa10.1□□□□□ -0.79
TRIM28-212ENST00000597995 RFKQ969G6 155 aa10.1□□□□□ -0.79
TRIM28-212ENST00000597995 PHF21AQ96BD5 680 aa10.1□□□□□ -0.79
TRIM28-212ENST00000597995 FOXRED1Q96CU9 486 aaPredicted RBP10.1□□□□□ -0.79
TRIM28-212ENST00000597995 RNFT2Q96EX2 444 aa10.1□□□□□ -0.79
TRIM28-212ENST00000597995 CITED2Q99967 270 aaPredicted RBP10.1□□□□□ -0.79
TRIM28-212ENST00000597995 PRSS22Q9GZN4 317 aa10.1□□□□□ -0.79
TRIM28-212ENST00000597995 S100A14Q9HCY8 104 aa10.1□□□□□ -0.79
TRIM28-212ENST00000597995 IMPAD1Q9NX62 359 aa10.1□□□□□ -0.79
TRIM28-212ENST00000597995 GNG8Q9UK08 70 aa10.1□□□□□ -0.79
TRIM28-212ENST00000597995 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.1□□□□□ -0.79
TRIM28-212ENST00000597995 TBL2Q9Y4P3 447 aaKnown RBP10.1□□□□□ -0.79
TRIM28-212ENST00000597995 LOC107986453A0A1B0GWG9 222 aa10.09□□□□□ -0.79
TRIM28-212ENST00000597995 C17orf98A8MV24 154 aa10.09□□□□□ -0.79
TRIM28-212ENST00000597995 SYT7O43581 403 aa10.09□□□□□ -0.79
TRIM28-212ENST00000597995 CCL3L1P16619 93 aa10.09□□□□□ -0.79
TRIM28-212ENST00000597995 COX7A1P24310 79 aa10.09□□□□□ -0.79
TRIM28-212ENST00000597995 DYNLT3P51808 116 aa10.09□□□□□ -0.79
TRIM28-212ENST00000597995 OR12D2P58182 307 aa10.09□□□□□ -0.79
TRIM28-212ENST00000597995 HABP2Q14520 560 aaPredicted RBP10.09□□□□□ -0.79
TRIM28-212ENST00000597995 CCBE1Q6UXH8 406 aaPredicted RBP10.09□□□□□ -0.79
TRIM28-212ENST00000597995 LHFPL4Q7Z7J7 247 aa10.09□□□□□ -0.79
TRIM28-212ENST00000597995 ENTHD1Q8IYW4 607 aa10.09□□□□□ -0.79
TRIM28-212ENST00000597995 DYNAPQ8N1N2 210 aa10.09□□□□□ -0.79
TRIM28-212ENST00000597995 OR2G2Q8NGZ5 317 aa10.09□□□□□ -0.79
TRIM28-212ENST00000597995 TRMT10AQ8TBZ6 339 aaKnown RBP10.09□□□□□ -0.79
TRIM28-212ENST00000597995 LGALS12Q96DT0 336 aa10.09□□□□□ -0.79
TRIM28-212ENST00000597995 ADAT3Q96EY9 351 aaPredicted RBP10.09□□□□□ -0.79
TRIM28-212ENST00000597995 ZNF649Q9BS31 505 aa10.09□□□□□ -0.79
TRIM28-212ENST00000597995 ABCB10Q9NRK6 738 aa10.09□□□□□ -0.79
TRIM28-212ENST00000597995 MTCH1Q9NZJ7 389 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms