RNA–Protein interactions for RNA: ENST00000597965.2

PNKP-210, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 351 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-210ENST00000597965 CITED2Q99967 270 aaPredicted RBP13.73□□□□□ -0.21
PNKP-210ENST00000597965 PKIBQ9C010 78 aa13.73□□□□□ -0.21
PNKP-210ENST00000597965 WNT10AQ9GZT5 417 aa13.73□□□□□ -0.21
PNKP-210ENST00000597965 SLC25A19Q9HC21 320 aa13.73□□□□□ -0.21
PNKP-210ENST00000597965 SLC7A11Q9UPY5 501 aa13.73□□□□□ -0.21
PNKP-210ENST00000597965 SLC22A13Q9Y226 551 aa13.73□□□□□ -0.21
PNKP-210ENST00000597965 MINOS1-NBL1R4GNA1 71 aa13.73□□□□□ -0.21
PNKP-210ENST00000597965 ODF3BA8MYP8 253 aa13.72□□□□□ -0.21
PNKP-210ENST00000597965 PSMD9O00233 223 aa13.72□□□□□ -0.21
PNKP-210ENST00000597965 SYNGR1O43759 233 aa13.72□□□□□ -0.21
PNKP-210ENST00000597965 PAX6P26367 422 aa13.72□□□□□ -0.21
PNKP-210ENST00000597965 VDAC2P45880 294 aaPredicted RBP13.72□□□□□ -0.21
PNKP-210ENST00000597965 ARHGDIBP52566 201 aa13.72□□□□□ -0.21
PNKP-210ENST00000597965 DYNC1I2Q13409 638 aaKnown RBP13.72□□□□□ -0.21
PNKP-210ENST00000597965 IL18R1Q13478 541 aa13.72□□□□□ -0.21
PNKP-210ENST00000597965 HABP2Q14520 560 aaPredicted RBP13.72□□□□□ -0.21
PNKP-210ENST00000597965 ATP6AP1Q15904 470 aa13.72□□□□□ -0.21
PNKP-210ENST00000597965 PLA1AQ53H76 456 aa13.72□□□□□ -0.21
PNKP-210ENST00000597965 DMRTC1Q5HYR2 192 aa13.72□□□□□ -0.21
PNKP-210ENST00000597965 BCL2L15Q5TBC7 163 aa13.72□□□□□ -0.21
PNKP-210ENST00000597965 TMEM42Q69YG0 159 aa13.72□□□□□ -0.21
PNKP-210ENST00000597965 BBS1Q8NFJ9 593 aa13.72□□□□□ -0.21
PNKP-210ENST00000597965 ZNF488Q96MN9 340 aa13.72□□□□□ -0.21
PNKP-210ENST00000597965 ZNF714Q96N38 554 aa13.72□□□□□ -0.21
PNKP-210ENST00000597965 CNN2Q99439 309 aaKnown RBP13.72□□□□□ -0.21
PNKP-210ENST00000597965 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.72□□□□□ -0.21
PNKP-210ENST00000597965 AURKAIP1Q9NWT8 199 aaPredicted RBP13.72□□□□□ -0.21
PNKP-210ENST00000597965 GTF2A1LQ9UNN4 478 aa13.72□□□□□ -0.21
PNKP-210ENST00000597965 hADV38S2A0JD32 116 aa13.71□□□□□ -0.21
PNKP-210ENST00000597965 DUS4LO95620 317 aaKnown RBP13.71□□□□□ -0.21
PNKP-210ENST00000597965 TTRP02766 147 aa13.71□□□□□ -0.21
PNKP-210ENST00000597965 IGHV1-8P0DP01 117 aa13.71□□□□□ -0.21
PNKP-210ENST00000597965 PIPP12273 146 aaPredicted RBP13.71□□□□□ -0.21
PNKP-210ENST00000597965 CEBPDP49716 269 aaPredicted RBP13.71□□□□□ -0.21
PNKP-210ENST00000597965 RAB13P51153 203 aa13.71□□□□□ -0.21
PNKP-210ENST00000597965 HCCSP53701 268 aa13.71□□□□□ -0.21
PNKP-210ENST00000597965 DLX6P56179 175 aa13.71□□□□□ -0.21
PNKP-210ENST00000597965 EDDM3BP56851 147 aa13.71□□□□□ -0.21
PNKP-210ENST00000597965 C16orf82Q7Z2V1 217 aa13.71□□□□□ -0.21
PNKP-210ENST00000597965 TMEM219Q86XT9 240 aa13.71□□□□□ -0.21
PNKP-210ENST00000597965 ELMOD2Q8IZ81 293 aa13.71□□□□□ -0.21
PNKP-210ENST00000597965 OR8H2Q8N162 312 aa13.71□□□□□ -0.21
PNKP-210ENST00000597965 WIPF2Q8TF74 440 aaPredicted RBP13.71□□□□□ -0.21
PNKP-210ENST00000597965 CAPSLQ8WWF8 208 aa13.71□□□□□ -0.21
PNKP-210ENST00000597965 CENPNQ96H22 339 aaPredicted RBP13.71□□□□□ -0.21
PNKP-210ENST00000597965 PLEKHA1Q9HB21 404 aa13.71□□□□□ -0.21
PNKP-210ENST00000597965 TVP23BQ9NYZ1 205 aa13.71□□□□□ -0.21
PNKP-210ENST00000597965 H2AFY2Q9P0M6 372 aaPredicted RBP13.71□□□□□ -0.21
PNKP-210ENST00000597965 SNX5Q9Y5X3 404 aa13.71□□□□□ -0.21
PNKP-210ENST00000597965 V9GYS6 101 aa13.71□□□□□ -0.21
PNKP-210ENST00000597965 MRPL3P09001 348 aaKnown RBP13.7□□□□□ -0.22
PNKP-210ENST00000597965 PF4V1P10720 104 aa13.7□□□□□ -0.22
PNKP-210ENST00000597965 AQP4P55087 323 aa13.7□□□□□ -0.22
PNKP-210ENST00000597965 ERVK11-1P61568 191 aa13.7□□□□□ -0.22
PNKP-210ENST00000597965 COL10A1Q03692 680 aa13.7□□□□□ -0.22
PNKP-210ENST00000597965 SLX4IPQ5VYV7 408 aa13.7□□□□□ -0.22
PNKP-210ENST00000597965 ZNF322Q6U7Q0 402 aaPredicted RBP13.7□□□□□ -0.22
PNKP-210ENST00000597965 CCBE1Q6UXH8 406 aaPredicted RBP13.7□□□□□ -0.22
PNKP-210ENST00000597965 ENTHD1Q8IYW4 607 aa13.7□□□□□ -0.22
PNKP-210ENST00000597965 CCDC54Q8NEL0 328 aa13.7□□□□□ -0.22
PNKP-210ENST00000597965 WFDC9Q8NEX5 89 aa13.7□□□□□ -0.22
PNKP-210ENST00000597965 GPR173Q9NS66 373 aa13.7□□□□□ -0.22
PNKP-210ENST00000597965 GLS2Q9UI32 602 aa13.7□□□□□ -0.22
PNKP-210ENST00000597965 OR52A1Q9UKL2 312 aa13.7□□□□□ -0.22
PNKP-210ENST00000597965 R4GMQ9 66 aa13.7□□□□□ -0.22
PNKP-210ENST00000597965 H0YJX3 145 aa13.69□□□□□ -0.22
PNKP-210ENST00000597965 CLIC3O95833 236 aa13.69□□□□□ -0.22
PNKP-210ENST00000597965 ACTA2P62736 377 aa13.69□□□□□ -0.22
PNKP-210ENST00000597965 ACTG2P63267 376 aa13.69□□□□□ -0.22
PNKP-210ENST00000597965 ACTC1P68032 377 aa13.69□□□□□ -0.22
PNKP-210ENST00000597965 ACTA1P68133 377 aa13.69□□□□□ -0.22
PNKP-210ENST00000597965 SLC35A2P78381 396 aa13.69□□□□□ -0.22
PNKP-210ENST00000597965 FOXB2Q5VYV0 432 aa13.69□□□□□ -0.22
PNKP-210ENST00000597965 Q8IYB0 196 aa13.69□□□□□ -0.22
PNKP-210ENST00000597965 DYNAPQ8N1N2 210 aa13.69□□□□□ -0.22
PNKP-210ENST00000597965 OR5AU1Q8NGC0 362 aa13.69□□□□□ -0.22
PNKP-210ENST00000597965 NDNFQ8TB73 568 aa13.69□□□□□ -0.22
PNKP-210ENST00000597965 EME1Q96AY2 570 aa13.69□□□□□ -0.22
PNKP-210ENST00000597965 SNX22Q96L94 193 aa13.69□□□□□ -0.22
PNKP-210ENST00000597965 CEP19Q96LK0 163 aa13.69□□□□□ -0.22
PNKP-210ENST00000597965 OR5M11Q96RB7 305 aa13.69□□□□□ -0.22
PNKP-210ENST00000597965 SLC29A1Q99808 456 aa13.69□□□□□ -0.22
PNKP-210ENST00000597965 SEBOXQ9HB31 216 aaPredicted RBP13.69□□□□□ -0.22
PNKP-210ENST00000597965 LINC00312Q9Y6C7 94 aa13.69□□□□□ -0.22
PNKP-210ENST00000597965 ADARB2-AS1A8MUL3 147 aa13.68□□□□□ -0.22
PNKP-210ENST00000597965 GATBO75879 557 aaKnown RBP13.68□□□□□ -0.22
PNKP-210ENST00000597965 SERPINA3P01011 423 aa13.68□□□□□ -0.22
PNKP-210ENST00000597965 PF4P02776 101 aa13.68□□□□□ -0.22
PNKP-210ENST00000597965 BRS3P32247 399 aa13.68□□□□□ -0.22
PNKP-210ENST00000597965 CXCR4P61073 352 aa13.68□□□□□ -0.22
PNKP-210ENST00000597965 MFGE8Q08431 387 aaPredicted RBP13.68□□□□□ -0.22
PNKP-210ENST00000597965 TMEM236Q5W0B7 351 aa13.68□□□□□ -0.22
PNKP-210ENST00000597965 Q6ZSR3 168 aa13.68□□□□□ -0.22
PNKP-210ENST00000597965 CENPVQ7Z7K6 275 aaPredicted RBP13.68□□□□□ -0.22
PNKP-210ENST00000597965 TMEM179BQ7Z7N9 219 aa13.68□□□□□ -0.22
PNKP-210ENST00000597965 ZNF676Q8N7Q3 588 aa13.68□□□□□ -0.22
PNKP-210ENST00000597965 OR14K1Q8NGZ2 314 aa13.68□□□□□ -0.22
PNKP-210ENST00000597965 NRBF2Q96F24 287 aa13.68□□□□□ -0.22
PNKP-210ENST00000597965 CLEC7AQ9BXN2 247 aa13.68□□□□□ -0.22
PNKP-210ENST00000597965 PAPOLBQ9NRJ5 636 aaKnown RBP13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms