RNA–Protein interactions for RNA: ENST00000596121.5

VRK3-210, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 983 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-210ENST00000596121 MED30Q96HR3 178 aa9.19□□□□□ -0.94
VRK3-210ENST00000596121 CEP19Q96LK0 163 aa9.19□□□□□ -0.94
VRK3-210ENST00000596121 ZNF48Q96MX3 618 aaPredicted RBP9.19□□□□□ -0.94
VRK3-210ENST00000596121 OPALINQ96PE5 141 aa9.19□□□□□ -0.94
VRK3-210ENST00000596121 CDCA4Q9BXL8 241 aa9.19□□□□□ -0.94
VRK3-210ENST00000596121 COMMD4Q9H0A8 199 aa9.19□□□□□ -0.94
VRK3-210ENST00000596121 DUSP21Q9H596 190 aa9.19□□□□□ -0.94
VRK3-210ENST00000596121 OCEL1Q9H607 264 aa9.19□□□□□ -0.94
VRK3-210ENST00000596121 CNTD2Q9H8S5 307 aa9.19□□□□□ -0.94
VRK3-210ENST00000596121 RBFOX1Q9NWB1 397 aaKnown RBP9.19□□□□□ -0.94
VRK3-210ENST00000596121 TAS2R4Q9NYW5 299 aa9.19□□□□□ -0.94
VRK3-210ENST00000596121 SLC25A10Q9UBX3 287 aaPredicted RBP9.19□□□□□ -0.94
VRK3-210ENST00000596121 NUP50Q9UKX7 468 aa9.19□□□□□ -0.94
VRK3-210ENST00000596121 ZNF281Q9Y2X9 895 aa9.19□□□□□ -0.94
VRK3-210ENST00000596121 PNMA8CA0A1B0GUJ8 204 aa9.18□□□□□ -0.94
VRK3-210ENST00000596121 TMEM82A0PJX8 343 aa9.18□□□□□ -0.94
VRK3-210ENST00000596121 NKX6-3A6NJ46 265 aa9.18□□□□□ -0.94
VRK3-210ENST00000596121 SULT1B1O43704 296 aa9.18□□□□□ -0.94
VRK3-210ENST00000596121 ALX3O95076 343 aa9.18□□□□□ -0.94
VRK3-210ENST00000596121 KNG1P01042 644 aa9.18□□□□□ -0.94
VRK3-210ENST00000596121 NDUFB7P17568 137 aa9.18□□□□□ -0.94
VRK3-210ENST00000596121 CAV3P56539 151 aa9.18□□□□□ -0.94
VRK3-210ENST00000596121 WNT4P56705 351 aa9.18□□□□□ -0.94
VRK3-210ENST00000596121 LRRC10Q5BKY1 277 aa9.18□□□□□ -0.94
VRK3-210ENST00000596121 ARMCX4Q5H9R4 360 aa9.18□□□□□ -0.94
VRK3-210ENST00000596121 RNLSQ5VYX0 342 aa9.18□□□□□ -0.94
VRK3-210ENST00000596121 LHFPL2Q6ZUX7 228 aa9.18□□□□□ -0.94
VRK3-210ENST00000596121 SERPINA12Q8IW75 414 aa9.18□□□□□ -0.94
VRK3-210ENST00000596121 TMEM185AQ8NFB2 350 aa9.18□□□□□ -0.94
VRK3-210ENST00000596121 OR52N4Q8NGI2 321 aa9.18□□□□□ -0.94
VRK3-210ENST00000596121 OR5D14Q8NGL3 314 aa9.18□□□□□ -0.94
VRK3-210ENST00000596121 GPR148Q8TDV2 347 aa9.18□□□□□ -0.94
VRK3-210ENST00000596121 WDFY2Q96P53 400 aa9.18□□□□□ -0.94
VRK3-210ENST00000596121 OR5M11Q96RB7 305 aa9.18□□□□□ -0.94
VRK3-210ENST00000596121 PCGF1Q9BSM1 259 aa9.18□□□□□ -0.94
VRK3-210ENST00000596121 ESM1Q9NQ30 184 aa9.18□□□□□ -0.94
VRK3-210ENST00000596121 C19orf12Q9NSK7 152 aa9.18□□□□□ -0.94
VRK3-210ENST00000596121 CHCHD3Q9NX63 227 aaKnown RBP9.18□□□□□ -0.94
VRK3-210ENST00000596121 OR14J1Q9UGF5 321 aa9.18□□□□□ -0.94
VRK3-210ENST00000596121 STAB1Q9NY15 2570 aa9.17□□□□□ -0.94
VRK3-210ENST00000596121 TRBV5-7A0A0A0MS05 114 aa9.17□□□□□ -0.94
VRK3-210ENST00000596121 TRAV40A0A0B4J280 105 aa9.17□□□□□ -0.94
VRK3-210ENST00000596121 CENPVL3A0A0U1RRI6 287 aa9.17□□□□□ -0.94
VRK3-210ENST00000596121 A0A1W2PPK0 400 aa9.17□□□□□ -0.94
VRK3-210ENST00000596121 MAGEA13PA6NCF6 341 aa9.17□□□□□ -0.94
VRK3-210ENST00000596121 PIN1P1O15428 100 aa9.17□□□□□ -0.94
VRK3-210ENST00000596121 ZNF737O75373 536 aa9.17□□□□□ -0.94
VRK3-210ENST00000596121 TOX4O94842 621 aa9.17□□□□□ -0.94
VRK3-210ENST00000596121 LIPFP07098 398 aa9.17□□□□□ -0.94
VRK3-210ENST00000596121 RPSAP08865 295 aaKnown RBP9.17□□□□□ -0.94
VRK3-210ENST00000596121 OCM2P0CE71 109 aa9.17□□□□□ -0.94
VRK3-210ENST00000596121 IGFBP3P17936 291 aaPredicted RBP9.17□□□□□ -0.94
VRK3-210ENST00000596121 CRHBPP24387 322 aa9.17□□□□□ -0.94
VRK3-210ENST00000596121 DUSP1P28562 367 aa9.17□□□□□ -0.94
VRK3-210ENST00000596121 COL10A1Q03692 680 aa9.17□□□□□ -0.94
VRK3-210ENST00000596121 INSL4Q14641 139 aa9.17□□□□□ -0.94
VRK3-210ENST00000596121 KISS1Q15726 138 aa9.17□□□□□ -0.94
VRK3-210ENST00000596121 C11orf91Q3C1V1 193 aa9.17□□□□□ -0.94
VRK3-210ENST00000596121 RUSC1-AS1Q66K80 236 aa9.17□□□□□ -0.94
VRK3-210ENST00000596121 BRD3OSQ6XYD6 125 aa9.17□□□□□ -0.94
VRK3-210ENST00000596121 PHC2Q8IXK0 858 aa9.17□□□□□ -0.94
VRK3-210ENST00000596121 PNLDC1Q8NA58 520 aaKnown RBP9.17□□□□□ -0.94
VRK3-210ENST00000596121 H1FXQ92522 213 aaKnown RBP9.17□□□□□ -0.94
VRK3-210ENST00000596121 TMEM106AQ96A25 262 aa9.17□□□□□ -0.94
VRK3-210ENST00000596121 CNBD2Q96M20 576 aa9.17□□□□□ -0.94
VRK3-210ENST00000596121 C1orf147Q96MC9 270 aaPredicted RBP9.17□□□□□ -0.94
VRK3-210ENST00000596121 VCX3BQ9H321 246 aa9.17□□□□□ -0.94
VRK3-210ENST00000596121 TRAV8-7A0A075B6U6 113 aa9.16□□□□□ -0.94
VRK3-210ENST00000596121 MDFIC2A0A1B0GVS7 189 aa9.16□□□□□ -0.94
VRK3-210ENST00000596121 RNF212BA8MTL3 300 aa9.16□□□□□ -0.94
VRK3-210ENST00000596121 K7N7A8 449 aa9.16□□□□□ -0.94
VRK3-210ENST00000596121 GABRPO00591 440 aa9.16□□□□□ -0.94
VRK3-210ENST00000596121 MYL12BO14950 172 aa9.16□□□□□ -0.94
VRK3-210ENST00000596121 GPR37O15354 613 aa9.16□□□□□ -0.94
VRK3-210ENST00000596121 TCF21O43680 179 aa9.16□□□□□ -0.94
VRK3-210ENST00000596121 GPX5O75715 221 aa9.16□□□□□ -0.94
VRK3-210ENST00000596121 KDM4BO94953 1096 aa9.16□□□□□ -0.94
VRK3-210ENST00000596121 TK1P04183 234 aa9.16□□□□□ -0.94
VRK3-210ENST00000596121 CELP19835 753 aa9.16□□□□□ -0.94
VRK3-210ENST00000596121 RAB3AP20336 220 aa9.16□□□□□ -0.94
VRK3-210ENST00000596121 VHLP40337 213 aa9.16□□□□□ -0.94
VRK3-210ENST00000596121 MAP2K4P45985 399 aa9.16□□□□□ -0.94
VRK3-210ENST00000596121 GP2P55259 537 aaKnown RBP9.16□□□□□ -0.94
VRK3-210ENST00000596121 SNU13P55769 128 aaKnown RBP9.16□□□□□ -0.94
VRK3-210ENST00000596121 ERVFRD-1P60508 538 aa9.16□□□□□ -0.94
VRK3-210ENST00000596121 MED21Q13503 144 aa9.16□□□□□ -0.94
VRK3-210ENST00000596121 TMEM200BQ69YZ2 307 aa9.16□□□□□ -0.94
VRK3-210ENST00000596121 C17orf107Q6ZR85 190 aa9.16□□□□□ -0.94
VRK3-210ENST00000596121 C9orf139Q6ZV77 190 aa9.16□□□□□ -0.94
VRK3-210ENST00000596121 VMO1Q7Z5L0 202 aa9.16□□□□□ -0.94
VRK3-210ENST00000596121 PDZD9Q8IXQ8 264 aa9.16□□□□□ -0.94
VRK3-210ENST00000596121 MKXQ8IYA7 352 aa9.16□□□□□ -0.94
VRK3-210ENST00000596121 FAM58AQ8N1B3 248 aa9.16□□□□□ -0.94
VRK3-210ENST00000596121 ZNF561Q8N587 486 aa9.16□□□□□ -0.94
VRK3-210ENST00000596121 C11orf42Q8N5U0 333 aa9.16□□□□□ -0.94
VRK3-210ENST00000596121 TEX29Q8N6K0 151 aa9.16□□□□□ -0.94
VRK3-210ENST00000596121 SIGLECL1Q8N7X8 197 aa9.16□□□□□ -0.94
VRK3-210ENST00000596121 ZDHHC22Q8N966 263 aa9.16□□□□□ -0.94
VRK3-210ENST00000596121 OR4M1Q8NGD0 313 aa9.16□□□□□ -0.94
VRK3-210ENST00000596121 TNFRSF14Q92956 283 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms