RNA–Protein interactions for RNA: ENST00000594806.5

TRIM28-204, Transcript of tripartite motif containing 28, humanhuman

TSL 5

Gene TRIM28, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-204ENST00000594806 PRDX2P32119 198 aa21.38■■□□□ 1.01
TRIM28-204ENST00000594806 CAV3P56539 151 aa21.38■■□□□ 1.01
TRIM28-204ENST00000594806 TRAM1Q15629 374 aa21.38■■□□□ 1.01
TRIM28-204ENST00000594806 SVOPQ8N4V2 548 aa21.38■■□□□ 1.01
TRIM28-204ENST00000594806 PNLDC1Q8NA58 520 aaKnown RBP21.38■■□□□ 1.01
TRIM28-204ENST00000594806 OR14A2Q96R54 314 aa21.38■■□□□ 1.01
TRIM28-204ENST00000594806 AUP1Q9Y679 476 aa21.38■■□□□ 1.01
TRIM28-204ENST00000594806 KDM4BO94953 1096 aa21.37■■□□□ 1.01
TRIM28-204ENST00000594806 BDKRB2P30411 391 aa21.37■■□□□ 1.01
TRIM28-204ENST00000594806 SRP14P37108 136 aaKnown RBP21.37■■□□□ 1.01
TRIM28-204ENST00000594806 TGFBR2P37173 567 aa21.37■■□□□ 1.01
TRIM28-204ENST00000594806 SCGB2A2Q13296 93 aa21.37■■□□□ 1.01
TRIM28-204ENST00000594806 ZNF367Q7RTV3 350 aa21.37■■□□□ 1.01
TRIM28-204ENST00000594806 PXT1Q8NFP0 134 aa21.37■■□□□ 1.01
TRIM28-204ENST00000594806 OR51A2Q8NGJ7 313 aa21.37■■□□□ 1.01
TRIM28-204ENST00000594806 ST8SIA4Q92187 359 aa21.37■■□□□ 1.01
TRIM28-204ENST00000594806 DERL3Q96Q80 235 aa21.37■■□□□ 1.01
TRIM28-204ENST00000594806 SPACA5Q96QH8 159 aa21.37■■□□□ 1.01
TRIM28-204ENST00000594806 GPER1Q99527 375 aa21.37■■□□□ 1.01
TRIM28-204ENST00000594806 MGLLQ99685 303 aa21.37■■□□□ 1.01
TRIM28-204ENST00000594806 SLC25A10Q9UBX3 287 aaPredicted RBP21.37■■□□□ 1.01
TRIM28-204ENST00000594806 LRRC42Q9Y546 428 aa21.37■■□□□ 1.01
TRIM28-204ENST00000594806 MAB21L2Q9Y586 359 aa21.37■■□□□ 1.01
TRIM28-204ENST00000594806 ZFHX3Q15911 3703 aa21.37■■□□□ 1.01
TRIM28-204ENST00000594806 ANK3Q12955 4377 aaKnown RBP21.37■■□□□ 1.01
TRIM28-204ENST00000594806 C22orf46C9J442 243 aa21.36■■□□□ 1.01
TRIM28-204ENST00000594806 SPRY1O43609 319 aaPredicted RBP21.36■■□□□ 1.01
TRIM28-204ENST00000594806 HSMCR30P0CW71 290 aa21.36■■□□□ 1.01
TRIM28-204ENST00000594806 CPEP16870 476 aa21.36■■□□□ 1.01
TRIM28-204ENST00000594806 PSMA1P25786 263 aaKnown RBP21.36■■□□□ 1.01
TRIM28-204ENST00000594806 BMXP51813 675 aa21.36■■□□□ 1.01
TRIM28-204ENST00000594806 ZP1P60852 638 aa21.36■■□□□ 1.01
TRIM28-204ENST00000594806 IKZF1Q13422 519 aa21.36■■□□□ 1.01
TRIM28-204ENST00000594806 CRIP3Q6Q6R5 217 aa21.36■■□□□ 1.01
TRIM28-204ENST00000594806 UNQ9370/PRO34162Q6UXP9 181 aa21.36■■□□□ 1.01
TRIM28-204ENST00000594806 BTN2A1Q7KYR7 527 aa21.36■■□□□ 1.01
TRIM28-204ENST00000594806 FAM58AQ8N1B3 248 aa21.36■■□□□ 1.01
TRIM28-204ENST00000594806 OR52N4Q8NGI2 321 aa21.36■■□□□ 1.01
TRIM28-204ENST00000594806 NANPQ8TBE9 248 aa21.36■■□□□ 1.01
TRIM28-204ENST00000594806 EMG1Q92979 244 aaKnown RBP21.36■■□□□ 1.01
TRIM28-204ENST00000594806 RFT1Q96AA3 541 aa21.36■■□□□ 1.01
TRIM28-204ENST00000594806 ACOT13Q9NPJ3 140 aa21.36■■□□□ 1.01
TRIM28-204ENST00000594806 GLS2Q9UI32 602 aa21.36■■□□□ 1.01
TRIM28-204ENST00000594806 FCN3O75636 299 aa21.35■■□□□ 1.01
TRIM28-204ENST00000594806 CHRM2P08172 466 aa21.35■■□□□ 1.01
TRIM28-204ENST00000594806 TMEM225BP0DP42 221 aa21.35■■□□□ 1.01
TRIM28-204ENST00000594806 MAP2K4P45985 399 aa21.35■■□□□ 1.01
TRIM28-204ENST00000594806 DGUOKQ16854 277 aa21.35■■□□□ 1.01
TRIM28-204ENST00000594806 SPIN3Q5JUX0 258 aa21.35■■□□□ 1.01
TRIM28-204ENST00000594806 C1QL2Q7Z5L3 287 aa21.35■■□□□ 1.01
TRIM28-204ENST00000594806 SATL1Q86VE3 508 aa21.35■■□□□ 1.01
TRIM28-204ENST00000594806 CDH26Q8IXH8 852 aa21.35■■□□□ 1.01
TRIM28-204ENST00000594806 CD177Q8N6Q3 437 aa21.35■■□□□ 1.01
TRIM28-204ENST00000594806 POM121Q96HA1 1249 aa21.35■■□□□ 1.01
TRIM28-204ENST00000594806 FAM234AQ9H0X4 552 aa21.35■■□□□ 1.01
TRIM28-204ENST00000594806 OPN4Q9UHM6 478 aa21.35■■□□□ 1.01
TRIM28-204ENST00000594806 RPUSD1Q9UJJ7 312 aaKnown RBP21.35■■□□□ 1.01
TRIM28-204ENST00000594806 A0A1B0GW55 424 aa21.34■■□□□ 1.01
TRIM28-204ENST00000594806 F8VVB4 439 aa21.34■■□□□ 1.01
TRIM28-204ENST00000594806 F8VWA3 439 aa21.34■■□□□ 1.01
TRIM28-204ENST00000594806 AVPP01185 164 aa21.34■■□□□ 1.01
TRIM28-204ENST00000594806 IFNA2P01563 188 aa21.34■■□□□ 1.01
TRIM28-204ENST00000594806 DUX4L2P0CJ85 424 aa21.34■■□□□ 1.01
TRIM28-204ENST00000594806 DUX4L3P0CJ86 424 aa21.34■■□□□ 1.01
TRIM28-204ENST00000594806 DUX4L4P0CJ87 422 aa21.34■■□□□ 1.01
TRIM28-204ENST00000594806 DUX4L5P0CJ88 424 aa21.34■■□□□ 1.01
TRIM28-204ENST00000594806 DUX4L6P0CJ89 424 aa21.34■■□□□ 1.01
TRIM28-204ENST00000594806 DUX4L7P0CJ90 424 aa21.34■■□□□ 1.01
TRIM28-204ENST00000594806 BCL3P20749 454 aa21.34■■□□□ 1.01
TRIM28-204ENST00000594806 ZNF93P35789 620 aaPredicted RBP21.34■■□□□ 1.01
TRIM28-204ENST00000594806 NPBWR2P48146 333 aa21.34■■□□□ 1.01
TRIM28-204ENST00000594806 ZNF146Q15072 292 aa21.34■■□□□ 1.01
TRIM28-204ENST00000594806 ACSM3Q53FZ2 586 aa21.34■■□□□ 1.01
TRIM28-204ENST00000594806 DDI2Q5TDH0 399 aa21.34■■□□□ 1.01
TRIM28-204ENST00000594806 LIPKQ5VXJ0 399 aa21.34■■□□□ 1.01
TRIM28-204ENST00000594806 DUX4L9Q6RFH8 374 aaPredicted RBP21.34■■□□□ 1.01
TRIM28-204ENST00000594806 C1orf229Q6ZS94 237 aaPredicted RBP21.34■■□□□ 1.01
TRIM28-204ENST00000594806 IL17RELQ6ZVW7 336 aa21.34■■□□□ 1.01
TRIM28-204ENST00000594806 OR5D18Q8NGL1 313 aa21.34■■□□□ 1.01
TRIM28-204ENST00000594806 HMG20AQ9NP66 347 aa21.34■■□□□ 1.01
TRIM28-204ENST00000594806 DUX4Q9UBX2 424 aa21.34■■□□□ 1.01
TRIM28-204ENST00000594806 OR14J1Q9UGF5 321 aa21.34■■□□□ 1.01
TRIM28-204ENST00000594806 IGKV1-12A0A0C4DH73 117 aa21.33■■□□□ 1.01
TRIM28-204ENST00000594806 MEGF11A6BM72 1044 aa21.33■■□□□ 1.01
TRIM28-204ENST00000594806 ANGPTL7O43827 346 aa21.33■■□□□ 1.01
TRIM28-204ENST00000594806 IGKV1D-12P01611 117 aa21.33■■□□□ 1.01
TRIM28-204ENST00000594806 EMX1Q04741 257 aaPredicted RBP21.33■■□□□ 1.01
TRIM28-204ENST00000594806 BATF2Q8N1L9 274 aa21.33■■□□□ 1.01
TRIM28-204ENST00000594806 ZNRF1Q8ND25 227 aa21.33■■□□□ 1.01
TRIM28-204ENST00000594806 LY6G5BQ8NDX9 201 aa21.33■■□□□ 1.01
TRIM28-204ENST00000594806 TMEM185AQ8NFB2 350 aa21.33■■□□□ 1.01
TRIM28-204ENST00000594806 C8orf46Q8TAG6 207 aa21.33■■□□□ 1.01
TRIM28-204ENST00000594806 PHYHIPQ92561 330 aa21.33■■□□□ 1.01
TRIM28-204ENST00000594806 DCTN5Q9BTE1 182 aa21.33■■□□□ 1.01
TRIM28-204ENST00000594806 TMED9Q9BVK6 235 aa21.33■■□□□ 1.01
TRIM28-204ENST00000594806 NOX4Q9NPH5 578 aa21.33■■□□□ 1.01
TRIM28-204ENST00000594806 RBFOX1Q9NWB1 397 aaKnown RBP21.33■■□□□ 1.01
TRIM28-204ENST00000594806 TRBV23-1A0A0A0MS06 115 aa21.32■■□□□ 1
TRIM28-204ENST00000594806 GABRPO00591 440 aa21.32■■□□□ 1
TRIM28-204ENST00000594806 SC5DO75845 299 aa21.32■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms