RNA–Protein interactions for RNA: ENST00000594387.1

IRF3-208, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-208ENST00000594387 SLAMF9Q96A28 289 aa14.28□□□□□ -0.12
IRF3-208ENST00000594387 ADAT3Q96EY9 351 aaPredicted RBP14.28□□□□□ -0.12
IRF3-208ENST00000594387 DPAGT1Q9H3H5 408 aa14.28□□□□□ -0.12
IRF3-208ENST00000594387 PRDM13Q9H4Q3 707 aa14.28□□□□□ -0.12
IRF3-208ENST00000594387 ISG20L2Q9H9L3 353 aaKnown RBP14.28□□□□□ -0.12
IRF3-208ENST00000594387 ELL3Q9HB65 397 aaPredicted RBP14.28□□□□□ -0.12
IRF3-208ENST00000594387 HES4Q9HCC6 221 aa14.28□□□□□ -0.12
IRF3-208ENST00000594387 TNFRSF19Q9NS68 423 aa14.28□□□□□ -0.12
IRF3-208ENST00000594387 PCDHGB5Q9Y5G0 923 aa14.28□□□□□ -0.12
IRF3-208ENST00000594387 POMT1Q9Y6A1 747 aa14.28□□□□□ -0.12
IRF3-208ENST00000594387 TRBV2A0A0J9YWF9 115 aa14.27□□□□□ -0.13
IRF3-208ENST00000594387 BTBD17A6NE02 478 aa14.27□□□□□ -0.13
IRF3-208ENST00000594387 OR4C45A6NMZ5 311 aa14.27□□□□□ -0.13
IRF3-208ENST00000594387 MAGEB3O15480 346 aa14.27□□□□□ -0.13
IRF3-208ENST00000594387 PAHP00439 452 aa14.27□□□□□ -0.13
IRF3-208ENST00000594387 CFPP27918 469 aa14.27□□□□□ -0.13
IRF3-208ENST00000594387 ERVK11-1P61568 191 aa14.27□□□□□ -0.13
IRF3-208ENST00000594387 IL18R1Q13478 541 aa14.27□□□□□ -0.13
IRF3-208ENST00000594387 GDPD3Q7L5L3 318 aa14.27□□□□□ -0.13
IRF3-208ENST00000594387 SERPINA12Q8IW75 414 aa14.27□□□□□ -0.13
IRF3-208ENST00000594387 SSMEM1Q8WWF3 244 aa14.27□□□□□ -0.13
IRF3-208ENST00000594387 CPNE2Q96FN4 548 aaPredicted RBP14.27□□□□□ -0.13
IRF3-208ENST00000594387 ZCCHC4Q9H5U6 513 aa14.27□□□□□ -0.13
IRF3-208ENST00000594387 FGF20Q9NP95 211 aaPredicted RBP14.27□□□□□ -0.13
IRF3-208ENST00000594387 MTCH1Q9NZJ7 389 aa14.27□□□□□ -0.13
IRF3-208ENST00000594387 DHDHQ9UQ10 334 aa14.27□□□□□ -0.13
IRF3-208ENST00000594387 SF3B6Q9Y3B4 125 aaKnown RBP14.27□□□□□ -0.13
IRF3-208ENST00000594387 TK1P04183 234 aa14.26□□□□□ -0.13
IRF3-208ENST00000594387 HCKP08631 526 aa14.26□□□□□ -0.13
IRF3-208ENST00000594387 FBP1P09467 338 aa14.26□□□□□ -0.13
IRF3-208ENST00000594387 CEBPDP49716 269 aaPredicted RBP14.26□□□□□ -0.13
IRF3-208ENST00000594387 AWAT1Q58HT5 328 aa14.26□□□□□ -0.13
IRF3-208ENST00000594387 PPP1R35Q8TAP8 253 aa14.26□□□□□ -0.13
IRF3-208ENST00000594387 CNIH3Q8TBE1 160 aa14.26□□□□□ -0.13
IRF3-208ENST00000594387 APH1BQ8WW43 257 aa14.26□□□□□ -0.13
IRF3-208ENST00000594387 C1orf147Q96MC9 270 aaPredicted RBP14.26□□□□□ -0.13
IRF3-208ENST00000594387 HEXA-AS1Q9H8Q6 139 aa14.26□□□□□ -0.13
IRF3-208ENST00000594387 IGKV1-27A0A075B6S5 117 aa14.25□□□□□ -0.13
IRF3-208ENST00000594387 A0A0U1RQK1 487 aa14.25□□□□□ -0.13
IRF3-208ENST00000594387 NPFFO15130 113 aa14.25□□□□□ -0.13
IRF3-208ENST00000594387 WBP4O75554 376 aaKnown RBP14.25□□□□□ -0.13
IRF3-208ENST00000594387 CD2P06729 351 aa14.25□□□□□ -0.13
IRF3-208ENST00000594387 MELTFP08582 738 aa14.25□□□□□ -0.13
IRF3-208ENST00000594387 PEX2P28328 305 aa14.25□□□□□ -0.13
IRF3-208ENST00000594387 UBE2E1P51965 193 aa14.25□□□□□ -0.13
IRF3-208ENST00000594387 COL10A1Q03692 680 aa14.25□□□□□ -0.13
IRF3-208ENST00000594387 SMN1Q16637 294 aaKnown RBP14.25□□□□□ -0.13
IRF3-208ENST00000594387 CCDC58Q4VC31 144 aa14.25□□□□□ -0.13
IRF3-208ENST00000594387 RPL22L1Q6P5R6 122 aaKnown RBP14.25□□□□□ -0.13
IRF3-208ENST00000594387 FAM58AQ8N1B3 248 aa14.25□□□□□ -0.13
IRF3-208ENST00000594387 Q8N7P7 452 aa14.25□□□□□ -0.13
IRF3-208ENST00000594387 OR4M1Q8NGD0 313 aa14.25□□□□□ -0.13
IRF3-208ENST00000594387 OR13C9Q8NGT0 318 aa14.25□□□□□ -0.13
IRF3-208ENST00000594387 RNF166Q96A37 237 aaPredicted RBP14.25□□□□□ -0.13
IRF3-208ENST00000594387 JAM3Q9BX67 310 aa14.25□□□□□ -0.13
IRF3-208ENST00000594387 C19orf12Q9NSK7 152 aa14.25□□□□□ -0.13
IRF3-208ENST00000594387 EXOSC1Q9Y3B2 195 aaKnown RBP14.25□□□□□ -0.13
IRF3-208ENST00000594387 HSPE1-MOB4S4R3N1 261 aa14.25□□□□□ -0.13
IRF3-208ENST00000594387 A0A1W2PRD5 423 aa14.24□□□□□ -0.13
IRF3-208ENST00000594387 A0A1W2PRF3 423 aa14.24□□□□□ -0.13
IRF3-208ENST00000594387 A0A1W2PRM7 423 aa14.24□□□□□ -0.13
IRF3-208ENST00000594387 MEIOCA2RUB1 952 aa14.24□□□□□ -0.13
IRF3-208ENST00000594387 K7N7A8 449 aa14.24□□□□□ -0.13
IRF3-208ENST00000594387 ZFPL1O95159 310 aa14.24□□□□□ -0.13
IRF3-208ENST00000594387 CLIC3O95833 236 aa14.24□□□□□ -0.13
IRF3-208ENST00000594387 EDDM3BP56851 147 aa14.24□□□□□ -0.13
IRF3-208ENST00000594387 ACSM1Q08AH1 577 aa14.24□□□□□ -0.13
IRF3-208ENST00000594387 PDZK1IP1Q13113 114 aa14.24□□□□□ -0.13
IRF3-208ENST00000594387 C8orf59Q8N0T1 100 aaPredicted RBP14.24□□□□□ -0.13
IRF3-208ENST00000594387 OR51A4Q8NGJ6 313 aa14.24□□□□□ -0.13
IRF3-208ENST00000594387 OR10AC1Q8NH08 325 aa14.24□□□□□ -0.13
IRF3-208ENST00000594387 TMEM80Q96HE8 168 aa14.24□□□□□ -0.13
IRF3-208ENST00000594387 SNX22Q96L94 193 aa14.24□□□□□ -0.13
IRF3-208ENST00000594387 DCLRE1BQ9H816 532 aa14.24□□□□□ -0.13
IRF3-208ENST00000594387 UNKLQ9H9P5 680 aaKnown RBP14.24□□□□□ -0.13
IRF3-208ENST00000594387 RHOFQ9HBH0 211 aa14.24□□□□□ -0.13
IRF3-208ENST00000594387 IGKV1-9A0A0C4DH69 117 aa14.23□□□□□ -0.13
IRF3-208ENST00000594387 RNASEK-C17orf49H0YIS7 233 aa14.23□□□□□ -0.13
IRF3-208ENST00000594387 SH2D1BO14796 132 aa14.23□□□□□ -0.13
IRF3-208ENST00000594387 SPRY1O43609 319 aaPredicted RBP14.23□□□□□ -0.13
IRF3-208ENST00000594387 ANGPTL7O43827 346 aa14.23□□□□□ -0.13
IRF3-208ENST00000594387 HAND1O96004 215 aa14.23□□□□□ -0.13
IRF3-208ENST00000594387 MT-ND2P03891 347 aa14.23□□□□□ -0.13
IRF3-208ENST00000594387 LIMS3P0CW19 117 aa14.23□□□□□ -0.13
IRF3-208ENST00000594387 LIMS4P0CW20 117 aa14.23□□□□□ -0.13
IRF3-208ENST00000594387 PRKACAP17612 351 aa14.23□□□□□ -0.13
IRF3-208ENST00000594387 BCL3P20749 454 aa14.23□□□□□ -0.13
IRF3-208ENST00000594387 GABRR1P24046 479 aa14.23□□□□□ -0.13
IRF3-208ENST00000594387 CAPGP40121 348 aa14.23□□□□□ -0.13
IRF3-208ENST00000594387 LGALS4P56470 323 aa14.23□□□□□ -0.13
IRF3-208ENST00000594387 ERVFRD-1P60508 538 aa14.23□□□□□ -0.13
IRF3-208ENST00000594387 SPIN3Q5JUX0 258 aa14.23□□□□□ -0.13
IRF3-208ENST00000594387 TMEM200BQ69YZ2 307 aa14.23□□□□□ -0.13
IRF3-208ENST00000594387 PIP4P2Q8N4L2 257 aa14.23□□□□□ -0.13
IRF3-208ENST00000594387 DYRK2Q92630 601 aa14.23□□□□□ -0.13
IRF3-208ENST00000594387 RFT1Q96AA3 541 aa14.23□□□□□ -0.13
IRF3-208ENST00000594387 GPER1Q99527 375 aa14.23□□□□□ -0.13
IRF3-208ENST00000594387 PDCD1LG2Q9BQ51 273 aa14.23□□□□□ -0.13
IRF3-208ENST00000594387 SEBOXQ9HB31 216 aaPredicted RBP14.23□□□□□ -0.13
IRF3-208ENST00000594387 A0A1B0GUS0 222 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms