RNA–Protein interactions for RNA: ENST00000594067.5

LIG1-206, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-206ENST00000594067 RTL6Q6ICC9 239 aa14.36□□□□□ -0.11
LIG1-206ENST00000594067 BRICD5Q6PL45 260 aa14.36□□□□□ -0.11
LIG1-206ENST00000594067 OPN5Q6U736 354 aa14.36□□□□□ -0.11
LIG1-206ENST00000594067 UBAC2Q8NBM4 344 aa14.36□□□□□ -0.11
LIG1-206ENST00000594067 ERGIC1Q969X5 290 aa14.36□□□□□ -0.11
LIG1-206ENST00000594067 TAAR9Q96RI9 348 aa14.36□□□□□ -0.11
LIG1-206ENST00000594067 DUSP23Q9BVJ7 150 aa14.36□□□□□ -0.11
LIG1-206ENST00000594067 TRAV20A0A0B4J274 112 aa14.36□□□□□ -0.11
LIG1-206ENST00000594067 A6NLC8 198 aa14.36□□□□□ -0.11
LIG1-206ENST00000594067 TSPAN15O95858 294 aa14.36□□□□□ -0.11
LIG1-206ENST00000594067 DAOP14920 347 aa14.36□□□□□ -0.11
LIG1-206ENST00000594067 LIFP15018 202 aa14.36□□□□□ -0.11
LIG1-206ENST00000594067 PMELP40967 661 aa14.36□□□□□ -0.11
LIG1-206ENST00000594067 ZNF133P52736 654 aaPredicted RBP14.36□□□□□ -0.11
LIG1-206ENST00000594067 RSU1Q15404 277 aa14.36□□□□□ -0.11
LIG1-206ENST00000594067 MIDNQ504T8 468 aa14.36□□□□□ -0.11
LIG1-206ENST00000594067 MAML2Q8IZL2 1156 aaPredicted RBP14.36□□□□□ -0.11
LIG1-206ENST00000594067 KDF1Q8NAX2 398 aaPredicted RBP14.36□□□□□ -0.11
LIG1-206ENST00000594067 METTL9Q9H1A3 318 aa14.36□□□□□ -0.11
LIG1-206ENST00000594067 FOXD3Q9UJU5 478 aaPredicted RBP14.36□□□□□ -0.11
LIG1-206ENST00000594067 IGKV1-27A0A075B6S5 117 aa14.35□□□□□ -0.11
LIG1-206ENST00000594067 ZNF850A8MQ14 1090 aa14.35□□□□□ -0.11
LIG1-206ENST00000594067 K7ESF4 209 aa14.35□□□□□ -0.11
LIG1-206ENST00000594067 IFNA21P01568 189 aa14.35□□□□□ -0.11
LIG1-206ENST00000594067 IGHV2-5P01817 119 aa14.35□□□□□ -0.11
LIG1-206ENST00000594067 UCP2P55851 309 aa14.35□□□□□ -0.11
LIG1-206ENST00000594067 PIGPP57054 158 aa14.35□□□□□ -0.11
LIG1-206ENST00000594067 Q6ZSR3 168 aa14.35□□□□□ -0.11
LIG1-206ENST00000594067 TDHQ8IZJ6 230 aa14.35□□□□□ -0.11
LIG1-206ENST00000594067 LINC00469Q8N7U9 141 aa14.35□□□□□ -0.11
LIG1-206ENST00000594067 SRXN1Q9BYN0 137 aa14.35□□□□□ -0.11
LIG1-206ENST00000594067 IGHV1-45A0A0A0MS14 117 aa14.35□□□□□ -0.11
LIG1-206ENST00000594067 A0A1W2PPH5 198 aa14.35□□□□□ -0.11
LIG1-206ENST00000594067 FAM221AA4D161 298 aa14.35□□□□□ -0.11
LIG1-206ENST00000594067 VAMP5O95183 116 aa14.35□□□□□ -0.11
LIG1-206ENST00000594067 PATE4P0C8F1 98 aa14.35□□□□□ -0.11
LIG1-206ENST00000594067 ECI1P42126 302 aa14.35□□□□□ -0.11
LIG1-206ENST00000594067 CXCL12P48061 93 aa14.35□□□□□ -0.11
LIG1-206ENST00000594067 DSCR4P56555 118 aaPredicted RBP14.35□□□□□ -0.11
LIG1-206ENST00000594067 KRBOX4Q5JUW0 171 aa14.35□□□□□ -0.11
LIG1-206ENST00000594067 PLXDC2Q6UX71 529 aa14.35□□□□□ -0.11
LIG1-206ENST00000594067 ZC3HAV1Q7Z2W4 902 aaKnown RBP14.35□□□□□ -0.11
LIG1-206ENST00000594067 BSCL2Q96G97 398 aaPredicted RBP14.35□□□□□ -0.11
LIG1-206ENST00000594067 REEP6Q96HR9 211 aa14.35□□□□□ -0.11
LIG1-206ENST00000594067 C20orf24Q9BUV8 137 aa14.35□□□□□ -0.11
LIG1-206ENST00000594067 ANGPTL4Q9BY76 406 aa14.35□□□□□ -0.11
LIG1-206ENST00000594067 ARV1Q9H2C2 271 aa14.35□□□□□ -0.11
LIG1-206ENST00000594067 RGCCQ9H4X1 137 aa14.35□□□□□ -0.11
LIG1-206ENST00000594067 FAM212BQ9NTI7 297 aaPredicted RBP14.35□□□□□ -0.11
LIG1-206ENST00000594067 PTRH2Q9Y3E5 179 aaKnown RBP14.35□□□□□ -0.11
LIG1-206ENST00000594067 NME2P1O60361 137 aa14.34□□□□□ -0.11
LIG1-206ENST00000594067 UMODP07911 640 aa14.34□□□□□ -0.11
LIG1-206ENST00000594067 GLI4P10075 376 aa14.34□□□□□ -0.11
LIG1-206ENST00000594067 ZNF14P17017 642 aaPredicted RBP14.34□□□□□ -0.11
LIG1-206ENST00000594067 GLP1RP43220 463 aa14.34□□□□□ -0.11
LIG1-206ENST00000594067 FXYD4P59646 89 aa14.34□□□□□ -0.11
LIG1-206ENST00000594067 GUK1Q16774 197 aa14.34□□□□□ -0.11
LIG1-206ENST00000594067 SDK2Q58EX2 2172 aa14.34□□□□□ -0.11
LIG1-206ENST00000594067 ZNF774Q6NX45 483 aa14.34□□□□□ -0.11
LIG1-206ENST00000594067 SLC39A7Q92504 469 aa14.34□□□□□ -0.11
LIG1-206ENST00000594067 SPACA1Q9HBV2 294 aa14.34□□□□□ -0.11
LIG1-206ENST00000594067 DANCRP0C864 163 aa14.34□□□□□ -0.11
LIG1-206ENST00000594067 RAB5AP20339 215 aa14.34□□□□□ -0.11
LIG1-206ENST00000594067 IGSF11Q5DX21 431 aa14.34□□□□□ -0.11
LIG1-206ENST00000594067 TSPO2Q5TGU0 170 aa14.34□□□□□ -0.11
LIG1-206ENST00000594067 SAP25Q8TEE9 199 aa14.34□□□□□ -0.11
LIG1-206ENST00000594067 MR1Q95460 341 aa14.34□□□□□ -0.11
LIG1-206ENST00000594067 C10orf35Q96D05 121 aa14.34□□□□□ -0.11
LIG1-206ENST00000594067 OR51M1Q9H341 326 aa14.34□□□□□ -0.11
LIG1-206ENST00000594067 NXT1Q9UKK6 140 aaKnown RBP14.34□□□□□ -0.11
LIG1-206ENST00000594067 LOC102723996A0A087X1L8 192 aa14.33□□□□□ -0.12
LIG1-206ENST00000594067 hCG_1809904A0A1W2PP81 198 aa14.33□□□□□ -0.12
LIG1-206ENST00000594067 A0A1W2PR64 198 aa14.33□□□□□ -0.12
LIG1-206ENST00000594067 A0A1W2PRV1 198 aa14.33□□□□□ -0.12
LIG1-206ENST00000594067 M0R036 132 aa14.33□□□□□ -0.12
LIG1-206ENST00000594067 OR8U8P0C7N1 319 aa14.33□□□□□ -0.12
LIG1-206ENST00000594067 FAM27BQ5VT28 67 aa14.33□□□□□ -0.12
LIG1-206ENST00000594067 TMEM156Q8N614 296 aa14.33□□□□□ -0.12
LIG1-206ENST00000594067 MARS2Q96GW9 593 aaKnown RBP14.33□□□□□ -0.12
LIG1-206ENST00000594067 RSRP1Q9BUV0 290 aa14.33□□□□□ -0.12
LIG1-206ENST00000594067 MIOXQ9UGB7 285 aa14.33□□□□□ -0.12
LIG1-206ENST00000594067 CACNA1EQ15878 2313 aa14.33□□□□□ -0.12
LIG1-206ENST00000594067 LCATP04180 440 aa14.33□□□□□ -0.12
LIG1-206ENST00000594067 OR5AC1P0C628 307 aa14.33□□□□□ -0.12
LIG1-206ENST00000594067 ZNF728P0DKX0 622 aa14.33□□□□□ -0.12
LIG1-206ENST00000594067 COX6A1P12074 109 aa14.33□□□□□ -0.12
LIG1-206ENST00000594067 CRYGSP22914 178 aa14.33□□□□□ -0.12
LIG1-206ENST00000594067 FHITP49789 147 aa14.33□□□□□ -0.12
LIG1-206ENST00000594067 SSR4P51571 173 aa14.33□□□□□ -0.12
LIG1-206ENST00000594067 MRPS34P82930 218 aaKnown RBP14.33□□□□□ -0.12
LIG1-206ENST00000594067 COMMD1Q8N668 190 aa14.33□□□□□ -0.12
LIG1-206ENST00000594067 AKR7LQ8NHP1 331 aa14.33□□□□□ -0.12
LIG1-206ENST00000594067 SPSB1Q96BD6 273 aa14.33□□□□□ -0.12
LIG1-206ENST00000594067 IMMP1LQ96LU5 166 aa14.33□□□□□ -0.12
LIG1-206ENST00000594067 TCEAL7Q9BRU2 100 aa14.33□□□□□ -0.12
LIG1-206ENST00000594067 PLEKHA2Q9HB19 425 aa14.33□□□□□ -0.12
LIG1-206ENST00000594067 DECR2Q9NUI1 292 aa14.33□□□□□ -0.12
LIG1-206ENST00000594067 NECAP2Q9NVZ3 263 aa14.33□□□□□ -0.12
LIG1-206ENST00000594067 SEC11BP0C7V7 166 aa14.32□□□□□ -0.12
LIG1-206ENST00000594067 NTF4P34130 210 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms