RNA–Protein interactions for RNA: ENST00000593089.1

TRIM47-207, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 392 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-207ENST00000593089 TMEM219Q86XT9 240 aa16.54■□□□□ 0.24
TRIM47-207ENST00000593089 DTX3Q8N9I9 347 aa16.54■□□□□ 0.24
TRIM47-207ENST00000593089 SLAMF9Q96A28 289 aa16.54■□□□□ 0.24
TRIM47-207ENST00000593089 CEP19Q96LK0 163 aa16.54■□□□□ 0.24
TRIM47-207ENST00000593089 MTCH1Q9NZJ7 389 aa16.54■□□□□ 0.24
TRIM47-207ENST00000593089 TBL2Q9Y4P3 447 aaKnown RBP16.54■□□□□ 0.24
TRIM47-207ENST00000593089 IGKV1-27A0A075B6S5 117 aa16.53■□□□□ 0.24
TRIM47-207ENST00000593089 ODF3BA8MYP8 253 aa16.53■□□□□ 0.24
TRIM47-207ENST00000593089 ZNF737O75373 536 aa16.53■□□□□ 0.24
TRIM47-207ENST00000593089 APOL3O95236 402 aa16.53■□□□□ 0.24
TRIM47-207ENST00000593089 PRB2P02812 416 aaPredicted RBP16.53■□□□□ 0.24
TRIM47-207ENST00000593089 DYNC1I2Q13409 638 aaKnown RBP16.53■□□□□ 0.24
TRIM47-207ENST00000593089 EDDM3AQ14507 147 aa16.53■□□□□ 0.24
TRIM47-207ENST00000593089 UBE2V2Q15819 145 aa16.53■□□□□ 0.24
TRIM47-207ENST00000593089 NSUN5P1Q3KNT7 163 aa16.53■□□□□ 0.24
TRIM47-207ENST00000593089 LDLRAD2Q5SZI1 272 aa16.53■□□□□ 0.24
TRIM47-207ENST00000593089 SAMD5Q5TGI4 173 aa16.53■□□□□ 0.24
TRIM47-207ENST00000593089 CATSPERDQ86XM0 798 aa16.53■□□□□ 0.24
TRIM47-207ENST00000593089 FOXRED1Q96CU9 486 aaPredicted RBP16.53■□□□□ 0.24
TRIM47-207ENST00000593089 MALSU1Q96EH3 234 aa16.53■□□□□ 0.24
TRIM47-207ENST00000593089 SERTAD4Q9NUC0 356 aa16.53■□□□□ 0.24
TRIM47-207ENST00000593089 A0A1W2PQL4 384 aaPredicted RBP16.52■□□□□ 0.24
TRIM47-207ENST00000593089 A6NDX4 124 aa16.52■□□□□ 0.24
TRIM47-207ENST00000593089 FBXO24O75426 580 aa16.52■□□□□ 0.24
TRIM47-207ENST00000593089 IGHV1-8P0DP01 117 aa16.52■□□□□ 0.24
TRIM47-207ENST00000593089 CD28P10747 220 aa16.52■□□□□ 0.24
TRIM47-207ENST00000593089 ATP6AP1Q15904 470 aa16.52■□□□□ 0.24
TRIM47-207ENST00000593089 ZNF626Q68DY1 528 aa16.52■□□□□ 0.24
TRIM47-207ENST00000593089 KDM4DQ6B0I6 523 aa16.52■□□□□ 0.24
TRIM47-207ENST00000593089 EGFL6Q8IUX8 553 aa16.52■□□□□ 0.24
TRIM47-207ENST00000593089 OR8H2Q8N162 312 aa16.52■□□□□ 0.24
TRIM47-207ENST00000593089 RPS4Y2Q8TD47 263 aa16.52■□□□□ 0.24
TRIM47-207ENST00000593089 ZNF714Q96N38 554 aa16.52■□□□□ 0.24
TRIM47-207ENST00000593089 ADI1Q9BV57 179 aa16.52■□□□□ 0.24
TRIM47-207ENST00000593089 WARS2Q9UGM6 360 aaKnown RBP16.52■□□□□ 0.24
TRIM47-207ENST00000593089 TMEM82A0PJX8 343 aa16.51■□□□□ 0.23
TRIM47-207ENST00000593089 METTL15A6NJ78 407 aa16.51■□□□□ 0.23
TRIM47-207ENST00000593089 GATBO75879 557 aaKnown RBP16.51■□□□□ 0.23
TRIM47-207ENST00000593089 RBP4P02753 201 aa16.51■□□□□ 0.23
TRIM47-207ENST00000593089 FUT6P51993 359 aa16.51■□□□□ 0.23
TRIM47-207ENST00000593089 CNN3Q15417 329 aaKnown RBP16.51■□□□□ 0.23
TRIM47-207ENST00000593089 SLC25A26Q70HW3 274 aa16.51■□□□□ 0.23
TRIM47-207ENST00000593089 TCF23Q7RTU1 214 aa16.51■□□□□ 0.23
TRIM47-207ENST00000593089 TPRX1Q8N7U7 411 aa16.51■□□□□ 0.23
TRIM47-207ENST00000593089 OR10H4Q8NGA5 316 aa16.51■□□□□ 0.23
TRIM47-207ENST00000593089 OR11H6Q8NGC7 330 aa16.51■□□□□ 0.23
TRIM47-207ENST00000593089 EMG1Q92979 244 aaKnown RBP16.51■□□□□ 0.23
TRIM47-207ENST00000593089 BORCS8Q96FH0 119 aa16.51■□□□□ 0.23
TRIM47-207ENST00000593089 SNX22Q96L94 193 aa16.51■□□□□ 0.23
TRIM47-207ENST00000593089 CDCA4Q9BXL8 241 aa16.51■□□□□ 0.23
TRIM47-207ENST00000593089 PITPNC1Q9UKF7 332 aa16.51■□□□□ 0.23
TRIM47-207ENST00000593089 OR2T7P0C7T2 308 aa16.5■□□□□ 0.23
TRIM47-207ENST00000593089 JUNBP17275 347 aaPredicted RBP16.5■□□□□ 0.23
TRIM47-207ENST00000593089 OR12D2P58182 307 aa16.5■□□□□ 0.23
TRIM47-207ENST00000593089 ACTA2P62736 377 aa16.5■□□□□ 0.23
TRIM47-207ENST00000593089 ACTG2P63267 376 aa16.5■□□□□ 0.23
TRIM47-207ENST00000593089 ACTC1P68032 377 aa16.5■□□□□ 0.23
TRIM47-207ENST00000593089 ACTA1P68133 377 aa16.5■□□□□ 0.23
TRIM47-207ENST00000593089 KPRPQ5T749 579 aaPredicted RBP16.5■□□□□ 0.23
TRIM47-207ENST00000593089 ZDHHC13Q8IUH4 622 aa16.5■□□□□ 0.23
TRIM47-207ENST00000593089 Q8N2B8 174 aa16.5■□□□□ 0.23
TRIM47-207ENST00000593089 BCAS4Q8TDM0 211 aa16.5■□□□□ 0.23
TRIM47-207ENST00000593089 OR5M11Q96RB7 305 aa16.5■□□□□ 0.23
TRIM47-207ENST00000593089 PRSS22Q9GZN4 317 aa16.5■□□□□ 0.23
TRIM47-207ENST00000593089 CHST5Q9GZS9 411 aa16.5■□□□□ 0.23
TRIM47-207ENST00000593089 GABARAPL1Q9H0R8 117 aa16.5■□□□□ 0.23
TRIM47-207ENST00000593089 IL36RNQ9UBH0 155 aa16.5■□□□□ 0.23
TRIM47-207ENST00000593089 HILPDAQ9Y5L2 63 aa16.5■□□□□ 0.23
TRIM47-207ENST00000593089 hADV38S2A0JD32 116 aa16.49■□□□□ 0.23
TRIM47-207ENST00000593089 PEX14O75381 377 aa16.49■□□□□ 0.23
TRIM47-207ENST00000593089 HAND1O96004 215 aa16.49■□□□□ 0.23
TRIM47-207ENST00000593089 SERPINA3P01011 423 aa16.49■□□□□ 0.23
TRIM47-207ENST00000593089 IGHA1P01876 353 aa16.49■□□□□ 0.23
TRIM47-207ENST00000593089 FASP25445 335 aa16.49■□□□□ 0.23
TRIM47-207ENST00000593089 HTR1FP30939 366 aa16.49■□□□□ 0.23
TRIM47-207ENST00000593089 MEF2CQ06413 473 aaPredicted RBP16.49■□□□□ 0.23
TRIM47-207ENST00000593089 ARSJQ5FYB0 599 aaPredicted RBP16.49■□□□□ 0.23
TRIM47-207ENST00000593089 AMIGO2Q86SJ2 522 aa16.49■□□□□ 0.23
TRIM47-207ENST00000593089 PRSS35Q8N3Z0 413 aa16.49■□□□□ 0.23
TRIM47-207ENST00000593089 ZNF676Q8N7Q3 588 aa16.49■□□□□ 0.23
TRIM47-207ENST00000593089 OR52N4Q8NGI2 321 aa16.49■□□□□ 0.23
TRIM47-207ENST00000593089 CIB1Q99828 191 aa16.49■□□□□ 0.23
TRIM47-207ENST00000593089 CHST6Q9GZX3 395 aa16.49■□□□□ 0.23
TRIM47-207ENST00000593089 MMP28Q9H239 520 aa16.49■□□□□ 0.23
TRIM47-207ENST00000593089 ENOPH1Q9UHY7 261 aa16.49■□□□□ 0.23
TRIM47-207ENST00000593089 LOC107986453A0A1B0GWG9 222 aa16.48■□□□□ 0.23
TRIM47-207ENST00000593089 F2RL2O00254 374 aa16.48■□□□□ 0.23
TRIM47-207ENST00000593089 SULT1C4O75897 302 aa16.48■□□□□ 0.23
TRIM47-207ENST00000593089 CALCBP10092 127 aa16.48■□□□□ 0.23
TRIM47-207ENST00000593089 GABRR1P24046 479 aa16.48■□□□□ 0.23
TRIM47-207ENST00000593089 PEX2P28328 305 aa16.48■□□□□ 0.23
TRIM47-207ENST00000593089 ATP6V1E1P36543 226 aa16.48■□□□□ 0.23
TRIM47-207ENST00000593089 POLR2IP36954 125 aaKnown RBP16.48■□□□□ 0.23
TRIM47-207ENST00000593089 SNU13P55769 128 aaKnown RBP16.48■□□□□ 0.23
TRIM47-207ENST00000593089 SLC34A1Q06495 639 aa16.48■□□□□ 0.23
TRIM47-207ENST00000593089 GRK1Q15835 563 aa16.48■□□□□ 0.23
TRIM47-207ENST00000593089 TP53I3Q53FA7 332 aa16.48■□□□□ 0.23
TRIM47-207ENST00000593089 RDH10Q8IZV5 341 aa16.48■□□□□ 0.23
TRIM47-207ENST00000593089 R3HDM4Q96D70 268 aa16.48■□□□□ 0.23
TRIM47-207ENST00000593089 CITED2Q99967 270 aaPredicted RBP16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms